Sequence alignment for CL0048

PF03550

LOLB_RALSO/41-209DATITRYQGRFSAR.YVQDDAQQSAVGSFLWRER.GADVQLELMSPLGQTLAIVSQ..NRQGATLELPNQPPR--RAAEV
LOLB_NEIMA/32-176HTRSFTAEGRLAVK.....AEGKGSYANFDWTYQ.PPVETININTPLGSTLGQLCQ..DRDGALAVDGKGNVY--QAESA
LOLB_SALTI/48-204HLNQYQTRGAFAYI.....SDDQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNA..QPGNVQLVDNKGQRY--TADDA
LOLB_NITEU/42-197ANEPFVLTGRLAVN.....ARQHRFSGGIRWQHT.GQSDEIYLFSPLGQIVAEIFR..DQTGVRLVTSEPAIY--RAQNA
LOLB_AGGAC/49-205QIQGYPALGQLGYI.....SSKERFSTRFDWQYNNPRDYTLQLYSTISSETLQIQM..HAQGMTISDNKGRQR--SAADA
LOLB_SHEON/45-200QAKAWELQGKLAIR.....TPEDKLSANLYWRHS.EERDELTLTTMLGTTVLTLEA..TPNSAHLHI.DGKDF--RDTNA
LOLB_HAEIN/51-207KIQSYQAKGQIGYI.....SPTERFSSRFEWQYQNPKSYTLKLYSLISKSTLWIQM..HQSGMTISDNNGNQQ--SAANS
LOLB_XYLFT/57-213EHPNWSFYGRAAIR.....QGSDGGSVRVEWEQH.GRGYRIVLSAPMSRQSWVLSG.SSSGPARLEGVGGWVR--VGEVA
LOLB_XANCP/56-214AHPAWSFQGRVAIS.....KGRDGGSGRLDWQQD.GPRYHVQLSAPVTRQSWVLTGDTTTGAGRLEGLDGGPR--AGADA
Q74FZ5_GEOSL/36-200TL...AATVSLSVK.....TPDGSTGGNGYLLYRRPDRFHMVMLTPFGTTALEFFA.AGERITILLPSKGQAY--VGTFA
LOLB_BORPE/40-199GEDVFSRVGRFAITVTESDGKQQAVQGGFAWRDD.GGSYLLDLTNPLGSTEARVEG..RPGMAVLTRANGERL--AAEHP
Q6F8J1_ACIAD/39-193QPNEFDLQGKIGVR.....TPQQSGSAFFTWSQH.QDDFDIELSGILGVGKTQIEG..KPGEVTLNSAKTGLI--TASSP
LOLB_VIBVY/40-199QIQSFQAVGKLGYI.....SPDQRQNLNFYWKHS.PEQSNLRFTTFLGQTALNLTM..TPQGARVETYDDQIL--TAANA
LOLB_VIBCH/42-201QIQHYQLTGKLGYI.....APDQRQSFNFQWQKS.PQKLSLRLSNFLGQTVLNLQV..DEQGARVETYDDQIY--RDQDA
LOLB_YERPE/48-204QLGQFETRGAFAYL.....SDKQKVYARFFWQQTSPERYRLLLTNPLGSTELELVV..QPGVTQLTDNQGKRY--VSDDP
LOLB_PSEAE/45-198ELDAWQIDGKVGIR.....APRDSGSGTLFWLQR.QGYYDIRLSGPLGRGAARLTG..REGAVSLEVAGQGRY--QAESP
LOLB_HAEDU/51-207EIKNYEVKGQFGYI.....SPTERFSAHFDWQYKTPIDFTLALSSNLSTKLLKLQR..SHQGLTVSDSEGYSR--TEADI
Q6LNB2_PHOPR/63-218NLSRYDAKGKLGYK.....APKLRFGGNMIWQTT.PNSDKLLLTNFLGKTLLKLDA..TPKMTTLVDYDGKQH--SGANA
LOLB_PHOLL/49-205QLNQYQTRGSFAYL.....SNEKKVYARFFWQQYHPERYRLLLTNPLGSTELELIV..QPNMTQLTDSQGKKY--FSDNP
LOLB_ERWCT/48-204QLTQYQTRGAFAYI.....SDSKRVSANFFWQDTPPQRYRLLLTNPLGSTELELRA..QPDGVQITDNQGKRY--VGKDA
LOLB_VIBPA/40-199TIHDFQATGKLGYI.....GPDQRQSLNFFWKHS.TALSQLRLTTVLGQTALKLTI..TPQGATVETYDDQVL--SARNA
LOLB_CHRVO/33-179ADAPFSVSGRLSAN.....LDGKGHVANFDWRHL.PPRDEVAINSPLGNTVAKVLR..DPGGVTLL.ADGKRW--QADDV
LOLB_PASMU/50-205KIRDYTNQGQLGYI.....SQKERFSTRFDWQYQNPTNYRLTLSSTLSPTTLSIEV..RHNVMHLSDNKGPLR--SAQDA
LOLB_COXBU/57-209RISQWNIDGAFSIQ.....QPGKTIIAAYDWQQK.GMNYRIRIHSSLDIYSVNISG..RPGMVTLWRSPRQHY--TASTP

PF03548

LOLA_CAMJE/20-160-LNFNTFSSNFTQIVKSKNSTL..SYSGHFILSK-D.QAYWSYDTPSKKEIYI-----NKNQVTIVEHDLEQV.......
LOLA_YERPE/32-191-SKVNSFHASFSQAVTSSDGAVVQEGEGELWVKR-PNLFNWHMTSPDESVLIS-----DGETLWFYNPFVEQA..TATW.
LOLA_PSEPK/34-197-EKSQTIEANFSQLTLGADGTSLQETSGKMTVKR-PGLFYWHTDAPQEQVVVS-----DGKNVTLWDPDLEQA..TIKK.
LOLA_XANCP/32-197-RGLKGLDGQFSQRVTDANGRVKENSSGRVALAT-PRQFRWEYAKPYKQLIVA-----DGKKVWVFDPDLEQV..TVRA.
LOLA_WOLSU/19-162-ESIGSFRSEFVQTIRSEDGKII.EYRGRVYAKS-PYYGLWKYEKPMEKEIYI-----VDKQVVIYEPALEQA.......
LOLA_PHOPR/29-188-SLVNAFSANFDQKVVSPEGDVLVEGKGDVTIKR-PNLFRWNTVTPDENLLVS-----DGKTLWYYSPFIEQV..TAMW.
LOLA_PHOLL/32-191-GKVNSFHASFTQTVTSDDGATIQEGEGQLWVKR-PNLFNWHMTSPDESVLVS-----DGKTLWFYNPFVEQV..TANW.
LOLA_COXBU/37-201-SNFRTYQAKFNQITFDGQDRVIQQSHGRVMIMR-PGRFRWETDSPTKQIIIT-----NGKTLWVYDVDLSQA..TQQP.
LOLA_XYLFA/34-199-RGLKTLQGHFSQEIIDTQGRVKERSNGTVALSL-PNLLRWECDAPYKQLVVA-----DGKRVWLFDPDLNQA..SVRL.
Q8FY83_BRUSU/65-219-SSARTMTGEFVQFGPRGE.....QTGGTFYIER-PGKIRFNYNN.SPIRVIS-----DGDSVVINNRKLDTW.......
Q9ADU7_HELMU/45-186-NGLISIEADFVQITHQGSQKL..IYTGKLYAKN-PSLAKWIYETPLKKTIYL-----NKKEAIIYEPMLEQA.......
Y864_RICPR/35-188-RTIKSVAIDFTQEDSYGK.....IVKGKLLIQK-PYNFRCNYYPPFPLVIIG-----TKNFVSMYDYDMEQV.......
LOLA_BORPE/38-200-ATVKGATGSFKQSTVSPQGATQPAQSGTFAFQR-PGKFKWAVQLPYEQLIVS-----DGKQVFQYDPDLAQV..TVRQ.
Q92L88_RHIME/54-209-SSVKTMAGEFVQFGPRGE.....QTGGKFYIRR-PGRIRFNYEAPSPMRVIA-----DGKSVVIGNMKLKTW.......
Q89WR1_BRAJA/85-242-SSLSTLVGNFVQVGPDGS.....KTQGDFYIQK-PGKVRFEYDAPSPIDIVA-----DGSSLVVRDRKLATQ.......
Q98EH4_RHILO/62-217-SSVKSMSGEFVQFGPKGE.....QTGGKFFLER-PGKIRFNYDGASNFKVIS-----DGKSVVILNKKMNTS.......
LOLA_PASMU/33-192-SKVNVLSADYAQTVSSSDGKNVQQGSGTLKIKR-PNLFRMDNKTPQENQIIS-----DGKTLWFYDPFVEQV..TANW.
LOLA_VIBCH/27-186-AMSEGFSATFNQQVLSPEGKVILTGNGKVDIAR-PSLFRWETETPDENLLVS-----DGTTLWHFDPFVEQV..TLYR.
LOLA_CHRVO/34-195-SGSKTLSADFNQTVTNKGKR..EEASGRLEIAR-PGKFRWEYTKPYAQLIVG-----DGKTLWIYDQDLAQV..TRKA.
Q6G1V1_BARHE/46-199-AAIKTMTGDFIQFSPKGK.....MSQGTFYLER-PGKIRFIYKK.IPLQIIA-----DGQFIGINNRALNTW.......
LOLA_HAEIN/33-192-AKVDVLSAEFVQTVTSGSGKNVQQGSGKLQIKR-PNLFRMETKTPQETQIIS-----DGKTLWFYDPFVQQV..TAQW.
LOLA_PSEU2/34-197-EKSQTLTARFSQLTLDGGGTQLQETTGEMALQR-PGLFNWHTDAPQEQLMVS-----DGKKVSLWDPDLEQV..TIKK.
LOLA_SHEON/32-191-TGTESLKADFKQTVTDVNKKVIQSGAGVFALAH-PNQFYWHLTAPDESKIVA-----DGKDLWIYNPFAEEV..VIMD.
Q984C3_RHILO/43-198-SSVKSMSGNFVQSDPRGE.....KTSGRFFLQR-PGKIRFNYTGQSGISLIA-----DGQSVVIYNKKLKTS.......
Q6ND29_RHOPA/147-304-SSLQTLVGQFVQVGPDGS.....KLTGDFYIMK-PGRVRFEYDDPSPISMIA-----DGQSVVVRDRKLATQ.......
LOLA_HELHP/23-166-ENLQSIEADFEQIAVNEDGVPT.RYEGHIIGKM-PSKVKWDYKAPLQKEIYM-----NKNEVIMYEPRLEQV.......
LOLA_NITEU/32-196-NKALTFQANFSQTLLDKNFQVIRKASGSMMFER-PGKFRWTYDQPYQQLIVG-----DGKQVWFYDQDLAQV..TVHR.
LOLA_ECO57/32-191-DKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKR-PNLFNWHMTQPDESILVS-----DGKTLWFYNPFVEQA..TATW.
LOLA_HAEDU/36-195-EHVAQYSADFEQTVRSSKGQQIQSGRGKFQVKR-PNLFRMDINAPQENVIVS-----DGENLWFYDPFVAQV..TVNS.
LOLA_VIBVY/27-186-GMNDGFSANFNQTVTSPEGEVVMEGEGSVDIAR-PSLFRWSTSLPDENLLVS-----DGKTLWYYSPFIEQV..SIYW.
LOLA_VIBPA/37-196-AMNEGFSADFSQQVISPEGETVMEGEGTVEIAR-PSLFRWSTTFPDENLLVS-----DGKTLWYYSPFIEQV..SIYW.
LOLA_ERWCT/32-191-NKVNSFHANFSQKVTSTDGAAVQEGEGELWLKR-PNLFNWKTTSPDESALIS-----DGKTLWFYNPFVEQV..TATW.
LOLA_HELPY/33-173-QHLQSFSAHFKQVLKNEKPL...VYYGVLKAKA-PNWALWVYEKPLKKEIYM-----NDKEVVIYEPNLFQA.......
LOLA_NEIMA/36-197-NDADGISGSFTQTVQSKKKT..QTAHGTFKILR-PGLFKWEYTSPYKQTIVG-----DGQTVWLYDVDLAQV..TKSS.
Y1483_AQUAE/33-197-ENTKTIKVSFVQKVKYEWYPKADVSKGIFYASK-GGKVRIDYYSPDRVSIFV-----DRKKVVLVNFEEKVV..YIES.
Q6AM51_DESPS/38-207-RQAEAFSTDFIQEKHLAMLNKPVIFRGHLSLIR-PDKLRWQFTSPLPSALIF-----NGEQGMRCDSEGEATPFLLSSD
Q9A261_CAUCR/54-210-QGLSSAKGRFVQTDQRGT.....QTQGTFYLQR-PGKARFAYDPPAGLLVVS-----NGNNVNIFDSRLKTY.......
Q72BG8_DESVH/37-203-DTVTTLKAAFTQKLLHRESGSTETRNGTLLFRK-PLLVRWETGGKNPEVLVI-----SSQDIWNFLPDEELA..YRYP.
LOLA_PSEAE/35-198-NKAQTLTARFSQLTLDGSGTRLQETAGQLSLKR-PGLFRWHTDAPNEQLLIS-----NGEKVWLYDPDLEQV..TIQK.

PF03550

LOLB_RALSO/41-209DTLMQ.DALGFSLPV---SGLRDWL...........RARPTPG.TPARVARDAQSRPETIEQ....NGWTVHYVAWSDDG
LOLB_NEIMA/32-176EELSR.QLVGFKLPI---QYLHIWA...........DGRPVAG.APYRILPDG.....ILEQ....YGWTVG........
LOLB_SALTI/48-204EEMIG.KLTGMPIPL---NSLRQWI...........LGLPG...DATDYKLDDQYRLSEVNYHQDGKNWKVVYGGY....
LOLB_NITEU/42-197EYLTS.QVLGWELPL---AGMRFWV...........RGTHFPD.TVAEKDLDKNRRTVAIRQ....DGWQVVYQNYY...
LOLB_AGGAC/49-205KMLLR.EIIGMDFPL---EQFAFWL...........KGQPE...DNADYQVGENHLLATFSRTIDGKPWTADYLSY....
LOLB_SHEON/45-200QALLE.RVSGWSIPI---NDLPLWI...........TGQIGS..LDRVIAVDSAGQAKQLQNMQTPPPWLVTFLSW....
LOLB_HAEIN/51-207KLLLQ.EIIGMDVPL---EHLAYWL...........KGQPA...MNADYQVGTNHLLGAFTYHVDGSQWTADYLTY....
LOLB_XYLFT/57-213EQVLF.EATGWQVPM---GLLPDWV...........RGRNSDS.GGGDVQLDAEGRPHRVYQ....GGWQLRFLDWF...
LOLB_XANCP/56-214EQVLL.EATGWTIPV---NQMPDWV...........RALRIADAGAARVDLDEHGRPRTVQQ....DGWTIDFLEWT...
Q74FZ5_GEOSL/36-200DLPAKGGLQGWR...---..MMQWVVEGSPLYRPEAAGRTEEQSDDGGVTLATYGPDGLLERKRSARG.EVIYRNY....
LOLB_BORPE/40-199DALAE.DALGSPVPV---TGLRDWL...........RGRLMAGAAPDGLERDAQGRPTAFEQ....DGWNARLSRY....
Q6F8J1_ACIAD/39-193EELLK.RATGWDAPI---THIVSWV...........QAKPAT..LLAKTMQDDQGRIKDIQE....DGWNVNL.......
LOLB_VIBVY/40-199TALVQ.QLTGLVIPV---EQLSDWI...........IGLPN...GADDFQLNEQNTLSSLEKDLNFQRWHIAYTQYRDVE
LOLB_VIBCH/42-201QSLIR.NLTGLDIPV---EQLEDWI...........LGLPT...QATHYELNEQNTLATLTKLASTEEWHVEYQRYQAIE
LOLB_YERPE/48-204QEMIQ.KLTGMSIPL---ESLRQWI...........LGLPG...DTSDFTLDDKYRLKKLTYQQNGVTWVVDYQEY....
LOLB_PSEAE/45-198EALLE.EQLGWRLPV---SHLLWWV...........RGLPAPD.SKSRLTLDADSRLARLEQ....DGWQIEYTRY....
LOLB_HAEDU/51-207HALMQ.EIIGVSFPI---DQFAYWV...........KGQPA...QEGNYIVNEKRQLSQFSYPINQQIWQARYVEY....
Q6LNB2_PHOPR/63-218SELVR.ELTGINLPI---EQMRDWL...........IGLPT...AADTYQLNPQNRVAYLAKQVDGQIWEMDYQEY....
LOLB_PHOLL/49-205EEIIY.QFTNMDIPL---DNLRHWI...........TGLPG...DAKNFKLDANYLLKTVNYQQNGATWQVNYQSY....
LOLB_ERWCT/48-204EYMIQ.QLTGMAIPL---NNLRQWI...........LGIPG...DATEFTLDERYLLKTITYRQGNQNWDVSYQSY....
LOLB_VIBPA/40-199NQLIY.RLTGLMMPV---DHMPDWL...........LGLPT...DADTFQLSPANTLQTLDKQIGLNDWKIAYERYGDVE
LOLB_CHRVO/33-179ESLTR.QVMGWPLPL---SNLVWWI...........RGLPAPG.VESRVDADGN.....LEQ....QGWHIRFIR.....
LOLB_PASMU/50-205KRLLK.EIVGMDLPL---DQFALWL...........KGQPD...ESREYRVAENHLLAHFSYPIDNQQWTADYLSY....
LOLB_COXBU/57-209EQLMQ.QQLGWQLPL---SNLYYWI...........RGIPAP..GAYQADFDTYTHLIALQQ....SGWHIRFSQY....

PF03548

LOLA_CAMJE/20-160.IFSHLDNIPNLNEIFKKASLIDK------------DKLVAK.....................YDNINYTIKLNQEQ..I
LOLA_YERPE/32-191.LKNATGNTPFMLIT..RNNPDDW------------KQYNVK......QKGDDFELTPK.SASGNLKQFAISVTPSGT.I
LOLA_PSEPK/34-197.LDVRLNQTPALLLS..GDVSKIS------------QSFDIA..SKEQGEVMDFTLKPK.TKDTLFDSLRVSF.RKGL.I
LOLA_XANCP/32-197.QGSEEQNSPLVALI...DPTRLD------------KQYDVSEEAAPRDGLQWLSLTPKVDTDASFQMASLGFGKDG..L
LOLA_WOLSU/19-162.TVSSLQNSIDFMALLRQSKRNSE------------GIYEAT.....................VFEQKYQILADEKGE.P
LOLA_PHOPR/29-188.LKDATEQTPFVLLT..RNSASDW------------DNYNVA......QTSDTFTLTPK.DTTSTMGKFVVTVAKTGE.V
LOLA_PHOLL/32-191.LKDATGNTPFMLIT..RNDAKEW------------SQYKIS......QQGNDFELTPN.NVTGNLKRFSITVTTDGT.I
LOLA_COXBU/37-201.LAQKTNINPASLLS..GSVKDLK------------QKFTIT..ISPTPDAATFQLVPNLGKSLNFNWIRLKFSKKQ..L
LOLA_XYLFA/34-199.QGNEERNSPLIALI...DPIQLD------------LKYDVSEEVAMRDGLRWLSLRPRVGIEASFQSASFGFAQTQ..L
Q8FY83_BRUSU/65-219.DLYPLSKTPLKLLL..ADRIDLG------------GGRLQS..VKQEPDMTTLVLGDK..SVFGDSKITMMFDPKSYDL
Q9ADU7_HELMU/45-186.TFTHLTKQVDFFAILHKATLGQD------------GKYHAK.....................VGDAQYVLSFAKNL..P
Y864_RICPR/35-188.SRISPSENIFNFLL..EDNVDFD------------KDFVFE.SVINKGNIFNITIYHT....RTEKRSEITFNKNIKQI
LOLA_BORPE/38-200.VDQAIGTSPAAILF...GAGQLS------------QAFAVS.ALPDRDGLQWLRAKPR.NADAGFSQVDIGLRDNQ..P
Q92L88_RHIME/54-209.DIYPLSKTPLNLLL..SERIDLR------------SRMVRD..VRVEADLITIVLGDR..SIFGDSTITMMFDPKSYNL
Q89WR1_BRAJA/85-242.DVYPLSQTPLRFLL..SDRIDLM------------KDTNVV.NVSADDVFVSVTIEEK.QALVGTSRLLLMFGAKDGQL
Q98EH4_RHILO/62-217.DLYPLSKTPLKLLL..DDRIDLS------------GDRVKS..VKEEDDLTTIQLSDK..AVFGNARITMMFDPKTYDL
LOLA_PASMU/33-192.VKDAVNNTPFVLLT..SDDSSHW------------AQYNVE......QKADTFTLKPK.AKQSNIKQFDIRIDSEGV.L
LOLA_VIBCH/27-186.AEEALEQTPFVLLT..RNKASDW------------DAYHVE......EKGDVFTLTPT.ALDSNQGRFQITISEKGV.V
LOLA_CHRVO/34-195.QGAALGSSPAALLA...GNNEIE------------RSYKLN.EAGKQGDLEWLAASPK.KQDNTFSAIRMGF.KNNV.L
Q6G1V1_BARHE/46-199.NFSKLFQTPMKFLL..DDKINIS------------SGRLLA..FREDPGAVTIVLRDK...SVGAGQIRMVFDSKTYSL
LOLA_HAEIN/33-192.VKNAVNNTPFVLLT..SNDKSHW------------HQYTVT......QQSDTFVLKPT.LSTSNIKQFDIRVDANGI.L
LOLA_PSEU2/34-197.LDQRLTQTPALLLS..GDVSKIS------------ESFDIT..AKEAGGVIDFTLKPK.TKDTLFDSLRLSF.RNGI.I
LOLA_SHEON/32-191.FTQAITASPIALLV..HRDDATW------------SQYAVT......KKQDCYEIKPK.ATDAGISAVNVCFNKGT..L
Q984C3_RHILO/43-198.RLYALSKTPLKLLL..DDKVEFS------------GNRLKG..IKDDGAQVTIKLADK..SAFGNSNITMVFDRKSLDL
Q6ND29_RHOPA/147-304.DVYPLSQTPLRYLL..SDRLDLL------------RDTNVV.SITSDDLYSNIIIEEK.NAVIGTSRLLLMFGTKDGQL
LOLA_HELHP/23-166.SHSRLKDKADFLSILKSAKKHND------------GTYHTK.....................VDGIEYVLFIDKAQK.P
LOLA_NITEU/32-196.LDQALGSTPAALLA...GGNTIE------------RDFNLQ.EIDVQGETEWLEAIPK.NQENSFELIRLGFSKTGI.L
LOLA_ECO57/32-191.LKDATGNTPFMLIA..RNQSSDW------------QQYNIK......QNGDDFVLTPK.ASNGNLKQFTINVGRDGT.I
LOLA_HAEDU/36-195.VQNAVNGTPFVLLT..SSDKQHW------------TQYEVT......QNADTFVLKPK.SAKNNLRQFDVQIDQNGL.L
LOLA_VIBVY/27-186.QEQAVQQTPFVLLT..RNQSSDW------------ENYQIT......QDGNVFTLVPK.AADSTQGQFQIDIDAKGI.V
LOLA_VIBPA/37-196.QEQATEQTPFVLLT..RNRASDW------------DNYKIS......QKGNEFTLIPT.AVDSTQGQFQINIDAKGV.V
LOLA_ERWCT/32-191.LKDATGNTPFILIT..RNDTSDW------------NKYDVR......QKGDDFELTPK.SASGNLKQFAINVTTNGT.I
LOLA_HELPY/33-173.TITPLKDKTDFFTILKRLKKQDD------------GSFKTT.....................INKTTYRLVFKDGK..P
LOLA_NEIMA/36-197.QDQAIGGSPAAILS...NKTALE------------SSYTLK.EDGSSNGIDYVLATPK.RNNAGYQYIRIGF.KGGN.L
Y1483_AQUAE/33-197.IKRNTSPVIASLFFLSEQPEKVF------------KP....IGEFKEGDKTVLLLKPL.KKDENVKEVKIYFSKDGE.I
Q6AM51_DESPS/38-207PVMRVVAEQLWNWLG..GDYLKLS------------KLYRLS...KMEPASLVIHFDKEGAISKILSRVTIRFNEKSLQP
Q9A261_CAUCR/54-210.ESYPLSKTPLNLLL..AREVRLD------------RGVVIT.DVRPLADGFTIVAQDA..KRQALGRISIDFSNGLVGL
Q72BG8_DESVH/37-203.LDLVQDSKSIIKVI..TGQAKLD------------QDFNVV.EEGQEEGLTRLHLYPK.EPVQQLTEAILWVDPQEHLI
LOLA_PSEAE/35-198.LDQRLTQTPALLLS..GDISKIS------------ESFAIT..YKEGGNVVDFVLKPK.TKDTLFDTLRLSF.RSGK.V

PF03550

LOLB_RALSO/41-209DNSTANARV.RRLDLD.....RPQGAGGAPGPLSVRLVLDQ.-----
LOLB_NEIMA/32-176.RTADSGGQVRTLQLN.....NGN........LNIRLVFTEI-----
LOLB_SALTI/48-204.DSKTQPAMPANMELS.....DGS........QRIKLKMDNW-----
LOLB_NITEU/42-197PAQEGMSVLPRLLEFS.....RPD........VKMRLLVDQW-----
LOLB_AGGAC/49-205.HVNRRPPMPENILLK.....TEG........QTLKIRVDEW-----
LOLB_SHEON/45-200.QSQSGAKVPYQLTLE.....RGD........LQLKLQLNQW-----
LOLB_HAEIN/51-207.HSNNS..MPENILLK.....NDSTK......QTLKIRVDEW-----
LOLB_XYLFT/57-213PSSVGRPMLPRQIEAS.....RGS........ARIRLIVDQW-----
LOLB_XANCP/56-214PASAAQPELPRRIEAR.....NGD........AKVRLLVDQW-----
Q74FZ5_GEOSL/36-200.RSLEGVPFPALVEFS....DSHG........VRVKITFDEP-----
LOLB_BORPE/40-199.....DAQGPQLLVLQ.....RQEPGRR....ILVRLVITQP-----
Q6F8J1_ACIAD/39-193.SYNAQQTLPNKLILKQSLADNQE........NRITMIIQNR-----
LOLB_VIBVY/40-199FHQQVVP.LPAKLSLT.....QQD........IKLNIVVSKW-----
LOLB_VIBCH/42-201WQHQPIP.LPDKLKLQ.....QNK........TSIQLVISQW-----
LOLB_YERPE/48-204.NTQVTPSLPSRLELN.....QDG........QRIKLKMDSW-----
LOLB_PSEAE/45-198.AEQNGYWLPERLKLH.....GQD........LDVTLVIKDW-----
LOLB_HAEDU/51-207.HENRVPYLPKLIVLE.....NGQ........QTLKIRLDHW-----
Q6LNB2_PHOPR/63-218.DYSIYPSLPKRMVLT.....QDK........QQITLIINEW-----
LOLB_PHOLL/49-205.DTSTTPALPNRLELI.....QGD........RRIKLKMDNW-----
LOLB_ERWCT/48-204.NTELTPPLPTSLELV.....QGE........QRIKLKMNNW-----
LOLB_VIBPA/40-199WHEQTLP.LPNKLKLT.....TSD........VKINLVITKW-----
LOLB_CHRVO/33-179.DADVDSDHPKRVEMQ.....REG........LTVKVVVQSW-----
LOLB_PASMU/50-205.HQLPLP.LPKDILLK.....TEG........QTLKIRIDNW-----
LOLB_COXBU/57-209.TTVGSVDLPRTLQLS.....NGS........LAVKIVVKHW-----

PF03548

LOLA_CAMJE/20-160QSISYKDEFENDVIIN-----LNN--------QIKNPKINSDVFKAK
LOLA_YERPE/32-191KSFTAVEQDGQRSAYT-----LKS--------QQ.SSVVDASKFTFT
LOLA_PSEPK/34-197NDMQLIDSVGQRTNIL-----FNG--------VKANQAVPDSKFKFD
LOLA_XANCP/32-197AKMEVVDAVGQRTAIS-----FSG--------WKRNPAFAADTFRYT
LOLA_WOLSU/19-162QKVFFIDKLHNEVQII-----FKN--------AEINPVLEKEMFLFM
LOLA_PHOPR/29-188RNFSVVEQDGQRSNFK-----FRQ--------FS.KQVPKANIFTFT
LOLA_PHOLL/32-191QKFSAIEQDGQKSAYQ-----LKG--------QQ.NTHVDAAKFSFT
LOLA_COXBU/37-201TEMTVLNNLDERSIFQ-----FSQ--------IKVNAPLSSTLFEFK
LOLA_XYLFA/34-199ARMELVDNLGQRTVIV-----FSG--------WQRNPVFAVDTFRFT
Q8FY83_BRUSU/65-219KQWTITDAQKLDTTVM-----IFN--------VRTGVRFTNDMFKID
Q9ADU7_HELMU/45-186HKITFIDELQNKIEII-----LKN--------LKVNPTLSDGIFVFT
Y864_RICPR/35-188EKLKIFEDH.NIVTIT-----FDK--------ITKVQKFSDDLFKFK
LOLA_BORPE/38-200ARIELVDAFGQTTRVE-----LSN--------LL.PGAVPASEFQFT
Q92L88_RHIME/54-209RQWTITDAQKKDTSVM-----IFN--------VRTGIALDDKVFRIP
Q89WR1_BRAJA/85-242KQWTVTDPQGYDTTIA-----VYN--------LDATKKLDPGMFKID
Q98EH4_RHILO/62-217RQWTITDAQGKDTTVM-----IFN--------TKEGVSFAPDTFAID
LOLA_PASMU/33-192RNFSTIEKDGQTNLYI-----LRN--------IT.NQPLADGIFKFS
LOLA_VIBCH/27-186QGFKVIEQDGQQSEFT-----FSK--------VK.QQKPNASVFNYK
LOLA_CHRVO/34-195VEMQLTDSFGNDTRIV-----FSQ--------QRQNAALPPARFAFA
Q6G1V1_BARHE/46-199RQWTIVDQQNLETTVQ-----IMN--------VRTGVRFADGMFTLP
LOLA_HAEIN/33-192RNFSTTEKDGQTNLYV-----LRN--------IT.NQTLSDSLFQFK
LOLA_PSEU2/34-197NDMQLIDSVGQRTNIL-----FTG--------VKANESIAASKFQFQ
LOLA_SHEON/32-191NKFNVLDDKGNLSQFD-----LSN--------QHSISTGDKALFKFV
Q984C3_RHILO/43-198RRWSITDERGQSTTVT-----LSN--------VREGVRAPPGTFMID
Q6ND29_RHOPA/147-304KQWTVTDPQGYDTTVA-----VYN--------LDTTRRPDPSMFKID
LOLA_HELHP/23-166ERIEFVDSMGVKTTLK-----LKN--------VKLNGAISDKKFVFV
LOLA_NITEU/32-196REMVLRDSFDQVTWLI-----FSE--------IEQNPTLTPDLFQFT
LOLA_ECO57/32-191HQFSAVEQDDQRSSYQ-----LKS--------QQ.NGAVDAAKFTFT
LOLA_HAEDU/36-195KGFSTIERDGQTNLYR-----LRN--------IT.TADLSADLFKFS
LOLA_VIBVY/27-186HGFNVIEQDGQKGIFK-----FTD--------MK.LGKPAAARFTFN
LOLA_VIBPA/37-196KGFNVIEQDGQKGLFT-----FSN--------VK.LGKPKADRFTFT
LOLA_ERWCT/32-191KQFTATEQDGQRSTYV-----LRN--------QQ.NGVVDAAQFTFT
LOLA_HELPY/33-173FSLEFKDGMNNLVTIT-----FSQ--------AEINPTIANEIFVFK
LOLA_NEIMA/36-197AAMQLKDSFGNQTSIS-----FGG--------LNTNPQLSRGAFKFT
Y1483_AQUAE/33-197LGLKTYDAQGSEISIN-----FIE--------VVRNYTPTDELFKPS
Q6AM51_DESPS/38-207EQVKIVERGGDFTRIF-----FKN--------PQLNIPLADDLFSRC
Q9A261_CAUCR/54-210MGWTVTDIKGGQIRVR-----LSD--------FAETADLDPKLFVLT
Q72BG8_DESVH/37-203RRVRVYDFYGNENEID-----FTS--------LEANATVADKAFTFT
LOLA_PSEAE/35-198NDMQMIDGVGQRTNIL-----FFD--------VKMNEALDAKQFTFD

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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