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51  structures 4242  species 4  interactions 6196  sequences 31  architectures

Clan: Mss4-like (CL0080)

Summary

Mss4-like superfamily Add an annotation

This clan contains TCTP, Mss4 and SelR families [1].

This clan contains 3 families and the total number of domains in the clan is 6196. The clan was built by A Bateman.

Literature references

  1. Thaw P, Baxter NJ, Hounslow AM, Price C, Waltho JP, Craven CJ; , Nat Struct Biol 2001;8:701-704.: Structure of TCTP reveals unexpected relationship with guanine nucleotide-free chaperones. PUBMED:11473261 EPMC:11473261

Members

This clan contains the following 3 member families:

Mss4 SelR TCTP

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
SelR (PF01641) 5387 (86.9%) View
TCTP (PF00838) 650 (10.5%) View
Mss4 (PF04421) 159 (2.6%) View
Total: 3 Total: 6196 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 4 interactions for this clan. More...

Interacting families
A B
SelR SelR
Mss4 Ras
Mss4
TCTP TCTP

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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