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50  structures 3586  species 3  interactions 11690  sequences 24  architectures

Clan: AbrB (CL0132)

Summary

AbrB/MraZ DNA-binding domain Add an annotation

This superfamily includes the DNA-binding domain of AbrB as well as the presumed DNA-binding protein MraZ (per. comm. A Andreeva and A Murzin).

This clan contains 3 families and the total number of domains in the clan is 11690. The clan was built by A Bateman.

Members

This clan contains the following 3 member families:

Antitoxin-MazE MraZ SymE_toxin

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
MraZ (PF02381) 5872 (50.2%) View
Antitoxin-MazE (PF04014) 4979 (42.6%) View
SymE_toxin (PF08845) 839 (7.2%) View
Total: 3 Total: 11690 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 3 interactions for this clan. More...

Interacting families
A B
Antitoxin-MazE PemK
Antitoxin-MazE
MraZ MraZ

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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