Sequence alignment for CL0370

PF09252

ABPE_MOUSE/24-90CIPFFGVYLGILSG--NRIGLHTELAPFDPTVEEKEAFEKIQDCYE-EEGLKAKTEDMKLMTTILFS-----SEC
Q7TNM7_MOUSE/24-90CLSFIRSYGALLTS--SRTFLHADVSQFYATVAERVAFEKLQDCLG-EEGPKTKILNPQILLSLYLS-----PEC
Q7TNM6_MOUSE/1-67CLSFARTYGAILTL--RRTFLHGDLSQFHATVAERVAFEKIQDCFR-EEGQKTIILNPQIMLSLYLS-----PEC
ABPZ_MOUSE/24-90CVPFFAGYAGVISG--SRLWLYHELSAFNGTPKETVAYEKIQDCYK-EQGVKSQTLEPQILASILVT-----PEC
ABPD_MOUSE/24-90CLPFFEGYASVLSG--SRVWLYQELQAFNATAEEKVALEKIQDCFS-EERIRNILLEPKIMEAMVAS-----PEC
Q5I1B2_RAT/1-67CFPFFGLYLGTVSG--SKLWLQHELSYFNPTPGETDAYEKIQNCFN-EAGSLGKFRDIKVMATLLFS-----SKC
Q5I1B4_RAT/1-67CLTFFEGYWRVAFA--GKTLLNSFLSKLDAQPQKGWPLKKIQDCYH-EGGLKTKLLDLQVMEAVITS-----QEC
Q5I1B3_RAT/1-67CLPFFTAYGGVLSG--SKLWLNHELDAYNATTGEREAYEKIQQCFR-EGGLKAKFLEPKILVTMVIS-----PEC
FEL1B_FELCA/24-90CPIFYDVFFAVANG--NELLLDLSLTKVNATEPERTAMKKIQDCYV-ENGLISRVLDGLVMTTISSS-----KDC
ABP_MESAU/24-90CIPFYEAFGAVVLG--NKQVLDVVLSKFNATDKEREAFEKIQECYN-DGGLKSKLLDTRVVYEVTVN-----SPC

PF01099

SG1D_BOVIN/24-88CPTFAADLTEFFYF..PDLLYRLSLAKYNAPPEAVAAKMEVKQCTD.RFSVKNRLIITNILGKIL.......LNC
B1B0N6_MOUSE/25-92CPAIKQDVHLFFHR..TSEEYVEYVKQYKDDPEILENTEKIKKCVDSTLTDEDKTHATAFIEKIEAR.....PAC
A6QPK0_BOVIN/23-91CSLLDNVVEKSVDPTVSKDEYRAYLKDFAQTDVEKKAADELKQCFL.QQSNETLANFKQMLQIIYDS.....IYC
Q863D2_PIG/22-90CSYLERVISDTSDSSVTTDVYLASLQEYISSDDTTQAIKELRECFL.KQSEETLENFSVFMQVTYNS.....KLC
Q9QXF3_MESAU/23-91CNALDDAIAKTINSSVSMEEYHETVQKYTFLPYIRRTMEKFKECFA.KQSNETQHNVFVMEFAIYNS.....DKC
PSC1_RAT/27-91CELVAHETISFLMK..SEEELKKELEMYNAPPAAVEAKLEVKRCVD.QMSNGDRLVVAETLVYIF.......LEC
UTER_MOUSE/24-90CPGFLQVLEALLME..SESGYVASLKPFNPGSDLQNAGTQLKRLVD.TLPQETRINIMKLTEKILTS.....PLC
Q9GK64_RABIT/22-90CVILESVLDKTIDPSVSVEDYTTYLQKYILTDAAKVALEELKQCFL.SQSNETLANVKVLEYAVFDS.....LYC
Q9GK66_RABIT/24-89CPTFIAESTANLLA..SESVFRASLSKYGAPPEAVEAKLQVKRCTD.KMSLGKRVLFGKVLGEIV.L.....RTC
Q9GK61_RABIT/22-90CPFVEKMVKTTLNSNVSTAEYIDVLKNYINDERTELAVVEFKNCFL.SQSEETLRNVVEMMETIYNS.....KLC
SG1D2_HUMAN/24-88CPALVSELLDFFFI..SEPLFKLSLAKFDAPPEAVAAKLGVKRCTD.QMSLQKRSLIAEVLVKIL.......KKC
FEL1A_FELCA/25-92CPAVKRDVDLFLTG..TPDEYVEQVAQYKALPVVLENARILKNCVDAKMTEEDKENALSVLDKIYTS.....PLC
UTER_LEPCA/24-90CPGFAHVIENLLLG..TPSSYETSLKEFQPDDAMKDAGMQMKKVLD.TLPQTTRENIIKLTEKIVKS.....PLC
Q6UWM4_HUMAN/22-90CVLLESVVEKTIDPSVSVEEYKADLQRFIDTEQTEAAVEEFKECFL.SQSNETLANFRVMVHTIYDS.....LYC
SG2A2_HUMAN/22-90CPLLENVISKTINPQVSKTEYKELLQEFIDDNATTNAIDELKECFL.NQTDETLSNVEVFMQLIYDS.....SLC
A2BH64_MOUSE/25-92CPVLQKKVHKFFDG..TTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGS.....RSC
UTER_HORSE/24-90CQSFADIIQGLFLG..TPASFEAAVEPFKPDADMKAATTQLKTLVD.FLPKNTKDSILKLMDKIAKS.....PLC
Q91WB5_MOUSE/25-92CPALQRKVDLFLNG..TTEEYVEYLKQFNENTKVLENAANIKKCSDRTLTEEDKAQATSLINKITAS.....RTC
UTER_MESAU/24-90CPGFFQVLEFLFMG..SESSYEAALKFYNPGSDLQDSGTQLKKLVD.TLPQKTRMNIMKLSEIILTS.....PLC
SG3A2_MOUSE/27-98LPVVDKLPVPLDDIIPSFDPLKMLLKTLGIS..VEHLVTGLKKCVD.ELGPEASEAVKKLLVIIICSYFPGRSLC
Q9GK67_RABIT/24-88CPAFVLDSVGFLFD..PKPVYRQKLAKYDAPPEAVEAKLQVKECTD.EIDKGKRVLIAAVLTKIV.......KEC
Q8WMS2_RABIT/24-88CPAFATELTGFLLA..SDVLFRLQIEIFNAPAEAVEAKMNVKRCVN.ELSLGKLLLIERILGEVL.......TEC
Q9GK62_RABIT/22-90CQLLDDMVTKTLDSQISLTDYHNFFKNLSSGAAAEMAVKDFKQCFL.MQSNETLNNIKVFLETVYNS.....PFC
SG2A1_HUMAN/22-90CKLLEDMVEKTINSDISIPEYKELLQEFIDSDAAAEAMGKFKQCFL.NQSHRTLKNFGLMMHTVYDS.....IWC
UTER_BOVIN/24-90CPSLLYVLGNLIAG..TPSSFEATLEPFSPDEDMKEATSQLKTLVD.TLSPKAKDSMLELMMKIIQS.....PEC
Q863D3_PIG/24-89CRALVKEFSAFLWK..PDEIYKPELELFGAPPEAVDAKMKVKQCAN.GISFKKKILLTKTLVEIL.V.....KKC
SG1D1_HUMAN/24-88CQALGSEITGFLLA..GKPVFKFQLAKFKAPLEAVAAKMEVKKCVD.TMAYEKRVLITKTLGKIA.......EKC
SG1C1_MOUSE/27-94NEFFMEFLQTLLVG.TPEELYEGPLGKYNVNDMAKSALRELKSCID.ELQPVHKEQLVKLLVQVLDA.....QED
SG2A1_RAT/23-91CSILDEVIRGTINSTVTLHDYMKLVKPYVHDHFTANAVKQFKQCFL.DQTNKTVENVGVMTEAIFNS.....ESC
O35176_MOUSE/26-93CPAIKEDVHLFLFG..TPEEYVNYVEKYKDDPETLENTEKLKICVDRTLTKENKEHAAAFIEKIESS.....PLC
UTER_HUMAN/24-90CPSFQRVIETLLMD..TPSSYEAAMELFSPDQDMREAGAQLKKLVD.TLPQKPRESIIKLMEKIAQS.....SLC
Q9GK65_RABIT/24-88CPALLAENFGYLYF..NKDVFRLQLAKFMPPREAAEALLTVKKCTD.GMPEFKRNLIAGALGEVV.......LQC

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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