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76  structures 2757  species 2  interactions 4895  sequences 25  architectures

Clan: Phage-coat (CL0373)

Summary

Phage coat superfamily Add an annotation

A number of different phage coat-proteins are collected together in this superfamily.

This clan contains 6 families and the total number of domains in the clan is 4895. The clan was built by P Coggill.

Members

This clan contains the following 6 member families:

DUF2184 L_lactis_ph-MCP Linocin_M18 P22_CoatProtein Phage_cap_P2 Phage_capsid

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Phage_capsid (PF05065) 3200 (65.4%) View
Phage_cap_P2 (PF05125) 788 (16.1%) View
Linocin_M18 (PF04454) 323 (6.6%) View
P22_CoatProtein (PF11651) 302 (6.2%) View
DUF2184 (PF09950) 275 (5.6%) View
L_lactis_ph-MCP (PF06673) 7 (0.1%) View
Total: 6 Total: 4895 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 2 interactions for this clan. More...

Interacting families
A B
Linocin_M18 Linocin_M18
Phage_capsid Phage_capsid

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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