Sequence alignment for CL0405

PF03754

Y2741_ARATH/67-178---TTPPEWLLNVMRREEN..GYNP.KLISTRQ.LYKTDL.KK---TEARL...SVPFKQ--VKTPDFLTEDETRII...
Y1592_ARATH/161-278---PQEPQWLLQVMSRMNG..AGDP.KLIIEKN.LDSNDV.DP---RQNRL...SIPINT--VIQNDFLTLDESRLI...
Y1593_ARATH/158-265---REMRWWLRQVMKDMRA...EDL.TLILEKT.LSTTDVITT---THGRF...SMHFNR--LISNDFLKPEERSIL...
Y3485_ARATH/207-323---RDTPKWLVKVMRDMKE..AKDA.KLIFEKT.LFVTDI.NP---TQNRL...SMPFNN--LLQNDFLTSVESRII...
Y2142_ARATH/58-169---SSIPDWLVKVMRKENG...YDP.KLIIKRRVLCTTDL.RK---NQGCL...SMHLSK--LEKSDFLTEDETRFL...
Y2467_ARATH/107-221---EPTPGWLISLMRSKNGGDVEDNSKKIIDKE.LFQTDV.DP---HQSRL...SIPVSQ--IVELEFLNHEEKRAI...
A5BFF6_VITVI/91-205---PELPVILRNRIRALGG...SDV.TFVIQKP.LFKTDV.SS---GHNRL...SIPLNQ--V.QQSFLTPEEXERL...
Y2172_ARATH/127-239---RTPTEWLIDVMREVNG...MDA.KLIFVKV.LPNSDV.DE---LQTRL...MMPWKQ--ILDMDFLNEEELEKI...
Y3961_ARATH/185-307---RETPEWLLDVMRKMKG..AEGPIKLIYEKT.LTATDV.KP---SESRL...LIPFNK--LLRNDFLTPEESRAIA..
A5BRC9_VITVI/168-270---PELPEDFKVRIREMNG...THP.ILVLEKQ.LFKTDI.NK---GENRL...SMPLNQ--I.RREFLSEDEKMRV...
Y5850_ARATH/244-384---TETPEWVFQAMGHMNA.DAETP.KLIFERT.LFKSDV.NS---NLSRL...LIPFQK--LIRNDFLTPEECRAMQED
Y2881_ARATH/40-157---TTMISSLSKRLKIDEC.KNQDP.EQNPNRV.ASSPSL.CH---VKSKRPQKGVSNKP--ILDMDFLNEEELEKI...
Y2146_ARATH/7-115---MQQPELLLKSMNKLNG...YHP.QLIIPKKTLFKCDL.DD---KQSRL...QVSSMH--MENSGFLTEDEKRTI...
Y1203_ARATH/184-298---REAPEWLVKMMGTMQG..SEGP.RLIYEKT.LTETDV.KP---VQSRL...LMPFNT--LIRNDFLTPVELRIL...

PF02362

NGA2_ARATH/23-129---------FDKVV.....---------------TPSDVG-KL.....NRL...VIPKQH..AERY..FPLDNSTTN---
REM23_ARATH/19-114---------FFKVL.....---------------KRSDMS-SE.....DTR...AIPYDF..VINFS........DN---
Y5809_ARATH/18-113---------FFKIL.....---------------RSADLS-SE.....IMR...GIPLNF..IKSIS........EE---
Y5800_ARATH/20-115---------FFKIL.....---------------RREDHS-TE.....MMR...MIPHHL..IRSIS........DK---
Y3209_ORYSJ/37-142---------FDKVV.....---------------TPSDVG-KL.....NRL...VIPKQH..AEKY..FPLDAASNE---
REM7_ARATH/171-249---------F.VAH.....---------------VTDSNL-RE.....DTL...FLPRKF..DRSD.........GL---
Y3701_ARATH/25-116---------F.........---------------QRADLS-SD.....CMR...ALPYSF..ISKVS........EK---
Y3216_ORYSJ/150-240---------FFKVM.....---------------..IGGF-RR.....Q.M...TIPYKF..A.ENF........RD---
Y1664_ARATH/9-100---------FMKPF.....---------------..ISEK-SS.....KSL...EIPLGF...NEYF........PA---
LEC2_ARATH/171-272---------CEKEL.....---------------KNSDVG-SL.....GRI...VLPKRD..AEAN..LPKLSDKEG---
REM14_ARATH/237-333---------F.VAN.....---------------VAPSTL-RY.....DTL...YLPKRF..MREN.........GV---
Y1086_ORYSJ/6-97---------FASAR.....---------------..LNAT-NQ.....SYL...PVPITL..ATAY.........EM---
REM1_ARATH/162-259---------FITAR.....---------------VTRYSL-LH.....DRL...DLSRNFT.LLFG.........GH---
REML1_ARATH/252-347---------TLTVT.....---------------ITPDSL-EH.....GRL...RLPLQF..MTEN.........SM---
REM1_ARATH/10-92---------FQQKF.....---------------..RTGD-KP.....F.L...TLDADF..LMNH...........---
REML1_ARATH/582-676---------FLTLT.....---------------ITPDSL-KH.....GRL...RLPLQF..MIEN.........SM---
Y3896_ARATH/30-122---------FFKLV.....---------------LPSTMK-DK.....M.M...KIPPRF..V.KLQ........GS---
REM1_BRAOB/10-92---------FQLTF.....---------------..LTGD-KP.....I.L...TLDDEF..ISSH...........---
REM4_ARATH/169-266---------YLVAH.....---------------VTPSSL-LR.....DNM...CVLSKF..ARSN.........GL---
RAVL3_ARATH/178-286---------FQKEL.....---------------TPSDVG-KL.....NRL...VIPKKY..AVKY..MPFISDDQS---
Y5772_ARATH/13-105---------FLKIF.....---------------..NSHE-DS.....QLL...VIPRSY..N.RYY........PN---
REM5_ARATH/14-103---------FFQPI.....---------------..LPGF-KS.....H.I...KIPVKF..FSKHI........EG---
Y3440_ARATH/16-107---------FFTVF.....---------------..VSHF-SS.....EFM...VIPVSY..YD...........HI---
REM17_ARATH/154-250---------F.VAK.....---------------VSAWCL-SN.....DRL...YIPLSF..ARLN.........GL---
RAVL4_ARATH/183-289---------FEKTV.....---------------TPSDVG-KL.....NRL...VIPKHQ..AEKH..FPLPLGNNN---
ARFR_ARATH/128-230---------FVKIL.....---------------TASDTS-TH.....GGF...SVLRKH..ATEC..LPSLDMTQA---
REM8_ARATH/149-244---------F.SQS.....---------------VTHSNI-SN.....DLV...TLPRDF..AKRN.........GL---
REM14_ARATH/131-226---------F.SAN.....---------------VAPSSL-RY.....DLM...LFPMGF..VREN.........GV---
ARFM_ORYSJ/128-234---------YAKQL.....---------------TQSDAN-NG.....GGF...SVPRLC..ADHI..FPALNLDDD---
REM12_ARATH/193-289---------FMTLT.....---------------LTHDNL-IK.....SRR...YLPLSF..TRDN.........GL---
Y1060_ARATH/125-222---------IKKQL.....---------------MSSDVD-TD....QSRL...MLSKEQ..VKEK..MLPFLEESE---
REM12_ARATH/341-436---------YVTLT.....---------------LTPEDV-RA.....CTL...ILPSQF..MKAN.........GI---
Y3204_ORYSJ/248-349---------FVAIM.....---------------KHSNVN-SR....RACL...VIPKRY..ASAHF..........---
Y3205_ORYSJ/29-119---------FHRQM.....---------------..SANF-EH.....S.M...IIPNKF..L.DQF........GG---
Y5828_ARATH/127-218---------FVKSM.....---------------VRSHVY-SC.....FWL...GLPSRF..CADNF..........---
VRN1_ARATH/5-98---------FFHKL.....---------------IFSSTI-QE.....KRL...RVPDKF..VSKF.........KD---
IDEFH_ORYSJ/297-399---------LRKEL.....---------------TNSDVG-NI.....GRI...VMPKRD..AEAH..LPALHQREG---
REM17_ARATH/617-714---------F.VAN.....---------------VTASSL-NY.....DRL...YLPLSF..VSSN.........GL---
REM8_ARATH/249-346---------FVKLT.....---------------PTLNSL-EI.....GKQ...HLPVSF..TKGN.........GL---
Y3216_ORYSJ/742-824---------F.........---------------......-RE.....R.M...IIPNEF..L.QYF........RG---
Y5800_ARATH/217-305---------FKLTI.....---------------KKSHLL-FL...........GIPKKF..VDMHM..........---
ARFJ_ORYSJ/125-227---------FAKTL.....---------------TQSDAN-NG.....GGF...SVPRFC..AETI..FPELDYSSE---
Y4469_ORYSJ/320-418---------WIKKE.....---------------INEYVL-ER.....CIL...SLARTF..CESI.........GL---
ARFT_ARATH/126-224---------FTKVL.....---------------TASDTS-AY.....GGF...FVPKKH..AIEC..LPPLPL...---
ARFQ_ARATH/119-221---------FAKIL.....---------------TPSDAN-NG.....GGF...SVPRFC..ADSV..FPLLNFQID---
Y3222_ORYSJ/40-124---------FTE.......---------------......-.......S.M...TVPARF..A.NNF........NG---
FUS3_ARATH/92-194---------FQKEL.....---------------KNSDVS-SL.....RRM...ILPKKA..AEAH..LPALECKEG---
Q9XJ59_DAUCA/514-618---------LQKVL.....---------------KQSDVG-CL.....GRI...VLPKRE..AETQ..LPQLEDRDG---
Y2608_ARATH/38-144---------FEKPL.....---------------TPSDVG-KL.....NRL...VIPKQH..AERY..FPLAAAAAD---
Y4474_ORYSJ/326-431---------WIKKE.....---------------ISNYML-EN.....GNI...SLPGIF..CKSI.........GL---
REM3_ARATH/154-251---------YCLLG.....---------------LTASNL-RL.....NRV...SFTKHF..SRAN.........GL---
O49236_AVEFA/504-605---------LQKVL.....---------------KQSDVG-AL.....GRI...VLP.KE..AETH..LPELKTRDG---
Y3160_ORYSJ/25-122---------LFLTFSVLCL---------------MPIMYM-AS.....H.K...TIPNEF..L.HNF........GG---
Y4469_ORYSJ/21-118---------QLKVL.....---------------VPSSFR-KM...........RICDEL..AAQL....GVGVGGG---
REM20_ARATH/11-102---------FFKVF.....---------------..LVES-AS.....ESL...MIPLPF..M.AFL........AD---
REM1_BRAOB/278-379---------FLTQK.....---------------FTPSRF-KT.....GQLYISMLSSGG..LRES.........GI---
Y3701_ARATH/202-292---------FKITI.....---------------RKSYLK-FL...........AIPKHF..VDDHI..........---
VRN1_ARATH/244-338---------FRVVL.....---------------RPSYLY-RG.....CIM...YLPSGF..AEKY.........LS---
REM9_ARATH/14-103---------FFQPL.....---------------..LPGF-QS.....N.L...KIPVNY..FSEHI........EG---
ABI3_ARATH/572-674---------LQKVL.....---------------KQSDVG-NL.....GRI...VLPKKE..AETH..LPELEARDG---
Y3845_ORYSJ/137-228---------FVKPM.....---------------LHSHVV-RG.....FWL...GLPRHF..CETYL..........---
REM6_ARATH/14-103---------FFQPL.....---------------..LPGF-KS.....H.I...NIPVKF..FSKYI........KG---
Y3204_ORYSJ/29-119---------FHLQM.....---------------..SANF-GH.....S.M...TIPNKF..L.DHF........GG---
REM1_ARATH/285-386---------FLIVK.....---------------YTPSRE-TT.....GQL...SLPVSF..TRNN.........SI---
Y5625_ARATH/46-159---------FEKSL.....---------------TPSDVG-KL.....NRL...VIPKQH..AEKY..FPLNAVLVS---
ARFA_ORYSJ/122-224---------FCKIL.....---------------TPSDTS-TH.....GGF...SVLRRH..ANEC..LPPLDMSMA---
VAL1_ARATH/295-395---------FEKTL.....---------------SASDAG-RI.....GRL...VLPKAC..AEAY..FPPISQSEG---
Y4469_ORYSJ/143-236---------FLTVL.....---------------..LPGI-MD.....K.M...RIPDKF..VRDYI........TG---
ARFA_ARATH/124-226---------FCKTL.....---------------TASDTS-TH.....GGF...SVLRRH..ADDC..LPPLDMSQQ---
REM3_ARATH/15-104---------FFVRS.....---------------..LAGH-TS.....N.L...IIPDEF..FTAHL........EG---
REM4_ARATH/14-103---------FFIID.....---------------..LSGQ-KS.....N.P...IIPTEF..IWNHF........NG---
REM15_ARATH/280-376---------F.VAN.....---------------VSPSSL-RY.....DTL...YLPKRF..MREN.........GV---
Y3918_ARATH/130-221---------FTKPM.....---------------LQSHVT-GG.....FWL...GLPLPF..CKAHM..........---
Q9FNS6_9CONI/550-652---------LQKVL.....---------------KQSDVG-NL.....GRI...VLPKKE..AETH..LPELEARDG---
REM16_ARATH/223-321---------FLVFM.....---------------KRSHVV-SK.....CFL...TIPYKW..CVKN.........ML---
ARFT_ORYSJ/436-542---------FDKKL.....---------------SPSDAA-ANGGGSGALF...VIPKPS..AAEHV.LPRIPD...---
Y1934_ORYSJ/216-325---------FDKTV.....---------------TPSDVG-KL.....NRL...VIPKQH..AEKH..FPLQLPSAG---
Y3622_ARATH/14-101---------FLSCV.....---------------......-SS.....NSL...LIPRSY..Y.EHL........PR---
Q8GT89_PRUPE/149-251---------FCKTL.....---------------TASDTS-TH.....GGF...SVPRRA..AEKL..FPPLDFTMQ---
Y3216_ORYSJ/453-543---------FFKVM.....---------------..IGDF-HK.....R.M...TIPDKF..A.RHF........KG---
Y5698_ARATH/10-105---------FFKVF.....---------------..LPEF-GS.....HEL...VIPPAF..I.DML........EK---
Y5013_ARATH/14-110---------FFKVY.....---------------..LPDE-SG.....DDM...VLPISF..T.RFL........PK---
REML1_ARATH/97-193---------FVTFT.....---------------LAPVDG-RH.....CRL...RLPMQF..TREN.........GI---
RAV2_ARATH/188-293---------FEKAV.....---------------TPSDVG-KL.....NRL...VIPKQH..AEKH..FPLPSPSPA---
REM3_ARATH/286-383---------FLTVT.....---------------LKHYMI-QS.....GQL...RLRRSF..VREN.........GI---
REM17_ARATH/437-532---------F.VGS.....---------------VNPSSL-YK.....DQL...YLPRNF..VSSN.........FL---
Y1235_ORYSJ/289-381---------CVIRM.....---------------STMHVY-YS.....FMM...RFPTGF..SRQHL..........---
Y6112_ORYSJ/56-154---------FTALI.....---------------AKSHLH-PK.....FQM...WIPPRF....QH.........RL---
VAL3_ARATH/328-426---------FEKIL.....---------------SATDTG-.......KRL...VLPKKY..AEAF..LPQLSHTKG---
Y5014_ARATH/34-109---------FNS.......---------------......-.............CLPKS..................---
REM17_ARATH/728-824---------F.VGS.....---------------VTASSI-KK.....DKL...YLWKSF..VSSN.........GL---
REM7_ARATH/14-103---------FFQPL.....---------------..LPGF-DS.....Y.L...NIPVKF..FSKRI........QG---
REM15_ARATH/434-523---------LCESM.....---------------FQ....-.............RLPVPF..TRMN.........GI---
Y7832_ORYSJ/124-227---------FVKTL.....---------------MISDFD-FR.....IRF...SAPMAD..AKGV..FPPLVDAKA---
REM16_ARATH/25-116---------FTQLL.....---------------..LPGF-HN.....R.L...VIPRKF..S.THC........KR---
ARFT_ORYSJ/120-233---------FEKQL.....---------------SPADVT-SN.....ALV...L...PA..GAEHV.LPPLDIAAY---
REM17_ARATH/268-362---------F.EGS.....---------------VTPSSL-RN.....DLL...YLPRSF..VNSN.........RL---
Y1235_ORYSJ/21-121---------FFKVL.....---------------..VGDF-KQ.....R.L...KIPPNF..C.KHIPWEESRKAKG---
REM4_ARATH/307-403---------ILTFD.....---------------LKPYVF-RS.....CQF...FLPASF..AREN.........GI---
REM6_ARATH/391-491---------FLTLT.....---------------VTPSSI-RS.....SRL...YLSKKF..ISVN.........KM---
REM17_ARATH/15-105---------FFQPI.....---------------..LTES-RT.....H.L...NIPVAF..FSKHV........EG---
ARFM_ARATH/124-228---------FSKIL.....---------------TASDVS-LS.....GGL...IIPKQY..AIEC..FPPLDMSQP---
REM1_BRAOB/142-240---------FLRAR.....---------------VTPYSL-TK.....DRL...DLSKDFKFMLFD.........EH---
Y2531_ARATH/19-114---------FFKVL.....---------------QRVDIS-SE.....NMR...ALPYDF..VRSFS........NN---
REM6_ARATH/285-378---------TQSCF.....---------------IFDHVA-K............SLPRNF..VRSD.........GL---
Y4765_ORYSJ/302-404---------LRKEL.....---------------TNSDVG-NI.....GRI...VMPKRD..AEAH..LPALHQREG---
REM14_ARATH/387-485---------FVTLN.....---------------LTPYNI-LR.....SAL...RLPIPF..TRMN.........GI---
REM6_ARATH/132-227---------F.SQS.....---------------VTTSNL-MR.....DSV...GVPRDF..AKRY.........GF---
ARFC_ARATH/159-261---------FCKTL.....---------------TASDTS-TH.....GGF...SVPRRA..AEDC..FPPLDYSQP---
ARFV_ORYSJ/128-230---------FAKTL.....---------------TQSDAN-NG.....GGF...SVPRYC..AETI..FPKLDYRAD---
Q8H6E4_MARPO/72-173---------FEKAV.....---------------TPSDVG-KL.....NRL...VIPKQH..AERC..FPLDLALNV---
REM9_ARATH/149-244---------F.SQS.....---------------VTHSNI-SR.....DAV...SVPRDF..VKRS.........GF---
REM5_ARATH/152-247---------F.SQS.....---------------VTASNL-TR.....DLV...GIPRDF..AKRY.........GL---
Y3204_ORYSJ/416-516---------YVSIM.....---------------.NKSNV-GT.....DGLYIIIFGRQF..ATRY..........L---

PF09217

T2E2_ECOLX/12-168EIACENYFVYIKRL--------------------SANDTGATG-----GHQVGLYIPSGI---VEKLFPSINHTREL---
Q9JZ51_NEIMB/24-168QTANKSIAVYCRYI--------------------RPNDVGTTG-----SHQSGFYIQKHF---SDDLF.DVVCQKGT---
A8AM36_CITK8/12-167KSTSDTYM.FIKRL--------------------SANDTGATG-----GHQVGIYIPSGI---VEHLFPSINHTRDL---
A8G987_SERP5/10-170EKSSDNWYIHIKRL--------------------SANDTGASG-----GHQSGVYLPNNS---ANFLFPSINRIDEE---
Q64Q06_BACFR/11-156KIQNAKYA.FCRFI--------------------TANDTGKNG-----SHQAGFYIPKCA---AALLF.DTPGVKGE---
A5FU96_ACICJ/12-167EYGVPGAVWFAKRL--------------------AANDTLATG-----AHGAGPYIPKEF---LFSVFPDLNHPEEE---

PF03754

Y2741_ARATH/67-178....................HENAMKIRDNGVPVNFVD-PEL------------NKHVLELRKWKM......KGNW----
Y1592_ARATH/161-278...................DEDEITNEGNMGVAAFLVD-QRT------------KKWNMGFKQWFMTT.DSGSSYW----
Y1593_ARATH/158-265....................EEDTYNDETMGVGAILVD-QRS------------QKWSVILKRWGQ..........----
Y3485_ARATH/207-323....................KEDINNNKKIGVGAILVD-QRS------------VKWGVMLKRWELKK.ESGKGSW----
Y2142_ARATH/58-169....................DEDFLKAKRDGLKVFLVD-PES------------DKHVVYLKKWNG......NTVW----
Y2467_ARATH/107-221....................EEDANRVRKEGVDAILVD-SHL------------REFPVNLRLRDM......RGIL----
A5BFF6_VITVI/91-205....................NSGGNGKKCAAMEVMLIE-PSL------------HRETISLRKWNMKK.ASGNSTS----
Y2172_ARATH/127-239..................DRHHKKISASDKGADVIVVN-SKG------------LQRKLKLKRWDM......TSTS----
Y3961_ARATH/185-307.................IDKEEEEEDTKKIGVKTIIVN-QFS------------KEWSLRFLIWVMKKKKSGNGTL----
A5BRC9_VITVI/168-270............................VEGMQVKLIQ-PSL------------EETTVTFKKWKM.....KESCH----
Y5850_ARATH/244-384KDKDDEDISVGTILVCQAKQEDEDKDDEDIGAGTILVN-QRF------------KMWGLRFKIWGMEK.DSGHGTL----
Y2881_ARATH/40-157..................DRHYKKISDSDKGADVILVN-SEG------------LQRKLKLKRWDM......TSTS----
Y2146_ARATH/7-115...................EAQKMKKRRTAGLRVAFID-PES------------QQYVLELHKWTK..........----
Y1203_ARATH/184-298....................LELEDDTD..GVGATLVD-PWE------------VKWGVILKKREMKK.YSGKGSL----

PF02362

NGA2_ARATH/23-129-------------------DSN.......KGLLLNFED.RSG............NSWRFRY..SY.....WNSSQS....
REM23_ARATH/19-114-------------------E.........LSGDMKFRV.QWG............NSWKVKI.........SKNPRF....
Y5809_ARATH/18-113-------------------E.........LSAKMLLKV.SWG............SSWPIKI.........CRNPSF....
Y5800_ARATH/20-115-------------------S.........SSFKMVLRV.PWG............RSWQVKI.........SKNPNF....
Y3209_ORYSJ/37-142-------------------..........KGLLLSFED.RTG............KPWRFRY..SY.....WNSSQS....
REM7_ARATH/171-249-------------------IKG.......SN.KIVLMN.EEA............RTWTLIL..KF.....RNSSRT....
Y3701_ARATH/25-116-------------------D.........FSYKMVIRA.QWG............KTWDVEV.........SKNPTY....
Y3216_ORYSJ/150-240-------------------Q.........IQGTIKLKA.RNG............NTCSVLV.........DKCSNK....
Y1664_ARATH/9-100-------------------P.........FPITVDLLD.YSG............RSWTVRM.........KKRGEK....
LEC2_ARATH/171-272-------------------IV............VQMRD.VFS...........MQSWSFKY..KFWS...NNKSRM....
REM14_ARATH/237-333-------------------DKR.......RG.EMILMN.EKG............KSWTLDL..KL.....KKSCGT....
Y1086_ORYSJ/6-97-------------------QHG.......DS..LRLKT.SHG............LKIKIRI.........KEAAST....
REM1_ARATH/162-259-------------------QKT.......C..EIDVVD.EQG............RRWTMKL..AK.....NISSGV....
REML1_ARATH/252-347-------------------NKP.......G..EITLLG.TDG............AKWMASL..L......LEKKGR....
REM1_ARATH/10-92-------------------............TKVLLKSDASD............KVWKVKL.........DGGR......
REML1_ARATH/582-676-------------------NKP.......G..EITVLG.KDG............AKWLVSL..LLE....RRGRMS....
Y3896_ARATH/30-122-------------------K.........LSEVVTLET.PAG............FKRSIKL.........KRIGEE....
REM1_BRAOB/10-92-------------------............TKVLLISDASD............KIWEVKL.........DGNR......
REM4_ARATH/169-266-------------------DRR.......EC.EIDLRD.EHE............KSWTLLL..RH.....NKKTGQ....
RAVL3_ARATH/178-286-------------------EKETSEGV..EDVEVVFYD.RAM............RQWKFRY..CY.....WRSSQS....
Y5772_ARATH/13-105-------------------P.........LPQTAVLKN.PEG............RFWNVQW.........TKSQEV....
REM5_ARATH/14-103-------------------K.H.......EGNTVYLRSYPSR............RTWKVKM.........EGHK......
Y3440_ARATH/16-107-------------------PHR.......FPKTVILRG.PGG............CSWKVAT.........EIKDDE....
REM17_ARATH/154-250-------------------NKI.......NSKKIYLQN.EEG............RSWKLVL..RH.....DKSGMQ....
RAVL4_ARATH/183-289-------------------VSV.......KGMLLNFED.VNG............KVWRFRY..SY.....WNSSQS....
ARFR_ARATH/128-230-------------------TPT.......QE..LVTRD.LHG............FEWRFKH..IF.....RGQPRR....
REM8_ARATH/149-244-------------------DKG.......MH.EIVLMN.EEG............KSWESEV..RS.....RMS.GQ....
REM14_ARATH/131-226-------------------.VG.......SG.KIVLMN.EKG............RSWNFNL..RQ.....KPSCGT....
ARFM_ORYSJ/128-234-------------------PPV.......QS..LTMGD.LQG............DSWEFRH..IY.....RGTPRR....
REM12_ARATH/193-289-------------------DKP.......G..MIFLLG.KTG............RKWEANL..LRE....ASGRIV....
Y1060_ARATH/125-222-------------------DPV.......KGVDVSVYG.PDG..........EVQQMKFKM.........WNGDKT....
REM12_ARATH/341-436-------------------NKL.......G..KKTLLG.QNR............KKWFAYL.........LSKSGF....
Y3204_ORYSJ/248-349-------------------.PL.......ESQTITLQRQGKN............KKWYPMFYI.......RKDGSG....
Y3205_ORYSJ/29-119-------------------K.........ISRTVELES.PKG............NVYVVKV.........SKHMNK....
Y5828_ARATH/127-218-------------------.PE.......ETMEIELED.EEG............EVYEAVY.........IGRRAG....
VRN1_ARATH/5-98-------------------E.........LSVAVALTV.PDG............HVWRVGL.........RKADNK....
IDEFH_ORYSJ/297-399-------------------VM............LKMDD.FKL...........ETTWNFKY..RFWP...NNKSRM....
REM17_ARATH/617-714-------------------DKM.......NGKEIVLLN.EEG............LSWKFNL..KY.....NQAGKH....
REM8_ARATH/249-346-------------------IHP.......G..EIILVD.KDR............VEWSMKL..QVD....NRGGMH....
Y3216_ORYSJ/742-824-------------------K.........IPRTIKLQL.RDG............CTYDVQV.........TKNLGK....
Y5800_ARATH/217-305-------------------.PT.......ETTMFKIHY.PRG...........KKSWDVTY.........VVTDVQ....
ARFJ_ORYSJ/125-227-------------------PPV.......QS..VCAKD.VHG............VEWTFRH..IY.....RGTPRR....
Y4469_ORYSJ/320-418-------------------VEE.......SSITLMMID.TTSTQGDQGGSSSSSRSWEVTG.........RRYKDA....
ARFT_ARATH/126-224-------------------.PA.......QE..LLAKD.LHG............NQWRFRH..SY.....RGTPQR....
ARFQ_ARATH/119-221-------------------PPV.......QK..LYVTD.IHG............AVWDFRH..IY.....RGTPRR....
Y3222_ORYSJ/40-124-------------------H.........ISEEVNLRS.PSG............ETWSIGV.........ANSDAG....
FUS3_ARATH/92-194-------------------IP............IRMED.LDG...........FHVWTFKY..RYWP...NNNSRM....
Q9XJ59_DAUCA/514-618-------------------IQ............IVMED.IGT...........SKVWNLRYSLRYWP...NNKSRM....
Y2608_ARATH/38-144-------------------AVE.......KGLLLCFED.EEG............KPWRFRY..SY.....WNSSQS....
Y4474_ORYSJ/326-431-------------------VEE.......TTITLMINS.SRG.....RSSSSSSRSWEVAC.........SVNKNG.YGC
REM3_ARATH/154-251-------------------TKR.......CC.MIDLMN.LSG............ESWTLGL..RH.....NKRTGQ....
O49236_AVEFA/504-605-------------------IS............IPMED.IGT...........SRVWSMRY..RFWP...NNKSRM....
Y3160_ORYSJ/25-122-------------------K.........IPKSIKLET.RSG............LTFDVQV.........TKNSGR....
Y4469_ORYSJ/21-118-------------------GAP.......RAATARVAS.PLG............KAWDVGV.........VRDGDG....
REM20_ARATH/11-102-------------------P.........LPKTVKLQG.LGG............KLWTVSL.........KKISGA....
REM1_BRAOB/278-379-------------------KKT.......G..EIILLD.NDG............RKWPSYL..NKTG...QPGGEW....
Y3701_ARATH/202-292-------------------.PN.......KSKIFTIRH.PNG............GSWKVLC.........LVREIR....
VRN1_ARATH/244-338-------------------GIS.......GFIKVQLAE................KQWPVRC.........LYKAGR....
REM9_ARATH/14-103-------------------K.H.......EGKTVTLRTDASE............RTWEVKM.........EGHR......
ABI3_ARATH/572-674-------------------IS............LAMED.IGT...........SRVWNMRY..RFWP...NNKSRM....
Y3845_ORYSJ/137-228-------------------.PK.......HDAIVTLLD.EKD............EQFDTNY.........LAYKNG....
REM6_ARATH/14-103-------------------K.H.......EGKTVKLRSDSSK............RTWKVKI.........EGHT......
Y3204_ORYSJ/29-119-------------------T.........LSRTIELVS.PKG............IVYIVKV.........TEHMNK....
REM1_ARATH/285-386-------------------NKT.......G..EVILLN.QDG............RKWSSYL..QITGLGRGAGSEW....
Y5625_ARATH/46-159-------------------SAAADTSSSEKGMLLSFED.ESG............KSWRFRY..SY.....WNSSQS....
ARFA_ORYSJ/122-224-------------------TPT.......QE..LITKD.LHG............SEWRFKH..IY.....RGQPRR....
VAL1_ARATH/295-395-------------------IP............LKIQD.VRG............REWTFQF..RYWP...NNNSRM....
Y4469_ORYSJ/143-236-------------------ENL.......NSNMAIILS.PLG............KSWRVEL.........DKDQSG....
ARFA_ARATH/124-226-------------------PPW.......QE..LVATD.LHN............SEWHFRH..IF.....RGQPRR....
REM3_ARATH/15-104-------------------K.T.......GLTKLKLTSDASD............RIWDVRL.........NGRR......
REM4_ARATH/14-103-------------------K.I.......QSTNMKLTSDASD............RNWDVKL.........DGAR......
REM15_ARATH/280-376-------------------DKR.......CG.EMILIN.EKG............KSWTLDL..KV.....KKSSGT....
Y3918_ARATH/130-221-------------------.PK.......RDVIMTLVD.EEE............EESQAKY.........LAQKNG....
Q9FNS6_9CONI/550-652-------------------IS............IAMED.IVT...........SRVWNMRY..RFWP...NNKSRM....
REM16_ARATH/223-321-------------------ITR.......QEVVMQVDQ................TKWEMKFNIFG.....ARGSGG....
ARFT_ORYSJ/436-542-------------------..............LRVTN.LQG............GRWEFGH..TWSDADTDRRSSS....
Y1934_ORYSJ/216-325-------------------GES.......KGVLLNFED.AAG............KVWRFRY..SY.....WNSSQS....
Y3622_ARATH/14-101-------------------R.........LPKTAILTG.TGG............RVWKVAM.........MSKREQ....
Q8GT89_PRUPE/149-251-------------------PPS.......QE..LVVRD.LHD............NSWTFRH..IY.....RGQPKR....
Y3216_ORYSJ/453-543-------------------V.........ISKTIKLEP.RSG............YTFDVQV.........TKKLNI....
Y5698_ARATH/10-105-------------------P.........LPKEAFLVD.EIG............RLWCVET.........KTEDTEERFC
Y5013_ARATH/14-110-------------------S.........LPETVTVRS.ISG............NIWKLEL.........KKCCGDDDTE
REML1_ARATH/97-193-------------------NKP.......G..KIYLVG.KDG............SKWLANL..LL.....ENNRGR....
RAV2_ARATH/188-293-------------------VT........KGVLINFED.VNG............KVWRFRY..SY.....WNSSQS....
REM3_ARATH/286-383-------------------KEA.......E..EIILVD.KNG............VEWPSYV..SS.....SKQRRE....
REM17_ARATH/437-532-------------------DKR.......CS.EIVLKN.ERG............EKRTLVL..KH.....FKKDL.....
Y1235_ORYSJ/289-381-------------------.PR.......ERTDVVLRD.PGG............KVWSVLY.........IPNTRD....
Y6112_ORYSJ/56-154-------------------AEP.......EARTAAVLH.SGG............KSWATSY.........CGHLKM....
VAL3_ARATH/328-426-------------------VP............LTVQD.PMG............KEWRFQF..RFWP...SSKGRI....
Y5014_ARATH/34-109-------------------..........LPKTVTVRS.ISG............NIWKLGF.........KKCGGE..VE
REM17_ARATH/728-824-------------------DKG.......CK.KIILKN.KWG............REWKLVL..KH.....YKSNCF....
REM7_ARATH/14-103-------------------R.N.......EGRTVELRTDASE............KTWQVKI.........QGRR......
REM15_ARATH/434-523-------------------NEE.......T..KMTLLD.KHG............VKWLTTL..RFE....DDKRKR....
Y7832_ORYSJ/124-227-------------------VQP...........LLVKD.LHG............SPMTFDY.........GRKGKR....
REM16_ARATH/25-116-------------------K.........LPQIVTLKS.PSG............VTYNVGV.........EEDDEK....
ARFT_ORYSJ/120-233-------------------QTA.......RLFDVR..D.LRG............KRFEFVH..IW.....DKKRCR....
REM17_ARATH/268-362-------------------DKR.......CS.EIVLKN.EQG............VKWPLVL..KR.....FKSV......
Y1235_ORYSJ/21-121-------------------LKE.......ASMAATLEG.PSG............RTWLVVI.........RRTAEG....
REM4_ARATH/307-403-------------------VEA.......G..EVTVLN.KDG............IEWKSHL..VN.....IKGRDQ....
REM6_ARATH/391-491-------------------ERA.......GGKKITLLD.KNG............EEWPVTL..LM.....DKRYTR....
REM17_ARATH/15-105-------------------RNN.......QNKTVTLRSDASD............KTWLVKM.........DGLK......
ARFM_ARATH/124-228-------------------IST.......QN..LVAKD.LYG............QEWSFKH..VF.....RGTPQR....
REM1_BRAOB/142-240-------------------NKP.......C..EIYLVN.EKG............RKWTLRL..SR.....NISSGA....
Y2531_ARATH/19-114-------------------E.........LSRKMKIKA.RWG............SSWEVEI.........CKNPRF....
REM6_ARATH/285-378-------------------IKG.......SN.KIVLMN.EGA............RTWTLIL..KF.....RDSRRS....
Y4765_ORYSJ/302-404-------------------VT............LKMDD.FKF...........ETTWNFKY..RFWP...NNKSRM....
REM14_ARATH/387-485-------------------NEE.......T..KMTLLD.KHG............MKWLTTL..RLV....DYKRKR....
REM6_ARATH/132-227-------------------NIG.......RH.EIVLMN.EEG............KPWESEV..IS.....YKS.GK....
ARFC_ARATH/159-261-------------------RPS.......QE..LLARD.LHG............LEWRFRH..IY.....RGQPRR....
ARFV_ORYSJ/128-230-------------------PPV.......QT..VLAKD.VHG............VVWKFRH..IY.....RGTPRR....
Q8H6E4_MARPO/72-173-------------------PCQ..........TLSFED.VSG............KHWRFRY..SY.....WNSSQS....
REM9_ARATH/149-244-------------------SKG.......RH.EIVLMN.EEG............KSWESEV..KS.....YMS.GA....
REM5_ARATH/152-247-------------------NIG.......RH.EIVLMD.EEG............NTWESEV..KS.....YKS.GR....
Y3204_ORYSJ/416-516-------------------PEG.......EQTLTLLMT.GKS............NAWQVKM.........RPRSGD....

PF09217

T2E2_ECOLX/12-168-------------------NPS-------VFLTAHVSS-HDC------------PDSEARAIYYNSRHFG...KTRNEKR
Q9JZ51_NEIMB/24-168-------------------NKT-------ISIKINWQD-GSV------------TNS..NFKYYGQ.......GTRNEAR
A8AM36_CITK8/12-167-------------------NPS-------VMLNAHTSS-HNC------------PDSEARAIYYNGRFFG...KTRNEKR
A8G987_SERP5/10-170-------------------NPS-------VGLTAKIIS-HEV------------NDSQVRAVYYNSKLRNLNPKGRNETR
Q64Q06_BACFR/11-156-------------------NKD-------KMVKVKWQD-DFT------------TDS..RFIYYGQ.......GTRNEYR
A5FU96_ACICJ/12-167-------------------NPD-------CWFDLYIDS-H.A------------DRRRIRAIWYNNRLRG...GTRNEAR

PF03754

Y2741_ARATH/67-178IYVFV-------KGWKNVLDA-----------------------------------------------------------
Y1592_ARATH/161-278SFVLR-------GEWSNVVET-----------------------------------------------------------
Y1593_ARATH/158-265NYFLS-------CGWNDVVKA-----------------------------------------------------------
Y3485_ARATH/207-323NYNLI-------CGWNDVVEA-----------------------------------------------------------
Y2142_ARATH/58-169KYVLS-------HGWNNVIDK-----------------------------------------------------------
Y2467_ARATH/107-221LYNLV-------AGWNQVVTD-----------------------------------------------------------
A5BFF6_VITVI/91-205MYVLV-------TNWKSVTER-----------------------------------------------------------
Y2172_ARATH/127-239NYVLG-------LGWNKVVTD-----------------------------------------------------------
Y3961_ARATH/185-307YYTLN-------RGWNGVVSG-----------------------------------------------------------
A5BRC9_VITVI/168-270LYVFT-------REWKLIVND-----------------------------------------------------------
Y5850_ARATH/244-384NYILN-------WDWNDVVKG-----------------------------------------------------------
Y2881_ARATH/40-157NYVLG-------SGWNKVVTE-----------------------------------------------------------
Y2146_ARATH/7-115SYAFV-------KGWNKVVDK-----------------------------------------------------------
Y1203_ARATH/184-298NYAII-------CGWNDIVEA-----------------------------------------------------------

PF02362

NGA2_ARATH/23-129.YVMT.......KGWSRFVKDKKLD.AGDIVSFQR....DSCNKDKLYIDWRRRP-------------------------
REM23_ARATH/19-114YFMEK.......SGWEKFVIDNALG.DHEFLTFT..HK.GQ.MSF..TVKIFNKD-------------------------
Y5809_ARATH/18-113YFMEK.......KGWDQFLSDNGLG.NDEFLTFT..HQ.GN.MCF..TVDIYQID-------------------------
Y5800_ARATH/20-115HYMED.......RGWNQFVNDNGLG.ENEYLTFT..HE.AN.MCF..NVTIFEAD-------------------------
Y3209_ORYSJ/37-142.YVMT.......KGWSRFVKEKRLD.AGDTVSFGRGV..GEAARGRLFIDWRRRP-------------------------
REM7_ARATH/171-249.FYMR.......GGWTSFSMSMGLN...........LE.............IPSR-------------------------
Y3701_ARATH/25-116YYIET.......RGWDLFVSDNALG.QNEFITFT..HR.GN.MVF..HVNIYEQN-------------------------
Y3216_ORYSJ/150-240.LVLT.......KGWAEFANSHDIK.MGDFLVFR..YT.GN.SQF..EVKIFDPS-------------------------
Y1664_ARATH/9-100.VFLT.......VGWENFVKDNNLE.DGKYLQFI..YD.RD.RTF..YVIIYGHN-------------------------
LEC2_ARATH/171-272.YVLE........NTGEFVKQNGAE.IGDFLTIY......EDESKNLYFAMNGNS-------------------------
REM14_ARATH/237-333.SLIR.......RGWRSFCSANGLR.AGSIITFK..LI.K..KSGTLVLCLLSNE-------------------------
Y1086_ORYSJ/6-97.LYMT.......TGWKEFAEATGLE.TGETILFR..MS.SR.SKA..RVMLLNRQ-------------------------
REM1_ARATH/162-259.FYIR.......LGWGNFCCANGLT.QGDLCKFK..LF.Q..NEERPVLWLCPQE-------------------------
REML1_ARATH/252-347.MSLG.......KGWKDFAKANGLK.TGDSITLE..PI.W..EDRTPVLSIKSSS-------------------------
REM1_ARATH/10-92...LS.......EGWEEFACDQKFR.DGDVLVFK..HH.GD.EVF..HVAVVSPS-------------------------
REML1_ARATH/582-676.LDAS.......SGQETREAEKNRE.ESSS.......L.WELEKRTYCPRKRDSS-------------------------
Y3896_ARATH/30-122.IWFH.......EGWSEFAEAHSIE.EGHFLLFE..YK.EN.SSF..RVIIFNVS-------------------------
REM1_BRAOB/10-92...LA.......GGWEEFAAVNNFS.EGNVLVFR..HN.GE.EIF..HVAVSSES-------------------------
REM4_ARATH/169-266.AFMR.......GGWRSFCRNNGIK.AGSICRFK..LV.Q..SGIKPVLQLCPNA-------------------------
RAVL3_ARATH/178-286.FVFT.......RGWNGFVKEKNLK.EKDIIVFY.......TCDVPNNVKTLEGQ-------------------------
Y5772_ARATH/13-105IISLQ.......EGWVKFVKDNGLI.DRDFLLFT..YD.GS.RSF..WVRIHRNG-------------------------
REM5_ARATH/14-103...LT.......EGWKEFVEAHDLR.VGDFVVFK..HK.GD.MLF..HVTAIGPS-------------------------
Y3440_ARATH/16-107.VLFS.......QGWPKFVRDNTLN.DGDFLTFA..YN.GA.HIF..EVSIFRGY-------------------------
REM17_ARATH/154-250.TFVQ.......SGWRRFCSENGIR.QGQ.YTFK..LV.R..KSAPPVIRLCRAK-------------------------
RAVL4_ARATH/183-289.YVLT.......KGWSRFVKEKRLC.AGDLISFKR....SNDQDQKFFIGWKSKS-------------------------
ARFR_ARATH/128-230.HLLT.......TGWSTFVSSKRLV.AGDAFVFL......RGENGDLRVGVRRLA-------------------------
REM8_ARATH/149-244.VFIV.......GGWKSLCSENKLK.GGDSCTFK..LL.Q..NAKTPVFQLCSRI-------------------------
REM14_ARATH/131-226.VYVR.......GGWVSFCDANGLQ.AGDIYTFK..LI.K..RGGTLVLRLLPKG-------------------------
ARFM_ORYSJ/128-234.HLLT.......TGWSKFVNAKQLV.AGDTVVFM..WCGAPAPERKLLVGVRRAA-------------------------
REM12_ARATH/193-289.L.TG.......KGWKEFAMANGLK.SGELFTLE..AI.L..EKGTPMLSLVNTQ-------------------------
Y1060_ARATH/125-222.PVLT.......SGWMQFVADYGLLKTSDFVTDG...............KVSQLE-------------------------
REM12_ARATH/341-436.VALG.......SGWKGFCEANGVK.TGESFNLE..YI.DE.QDTTPVFKFCSNS-------------------------
Y3204_ORYSJ/248-349.YMLY.......GCWKNFVRDNHVK.EGDMCIFH..LTKFTGGEFGATVHLLRET-------------------------
Y3205_ORYSJ/29-119.TVLQ.......CGWEAFVDAHQIE.ENDSLLFR..HI.KN.SRR..ASGVQERN-------------------------
Y5828_ARATH/127-218...LS.......GGWKRFALDHKLD.DGDALLFE..LV.EP.KKF..KIYVFKGN-------------------------
VRN1_ARATH/5-98.IWFQ.......DGWQEFVDRYSIR.IGYLLIFR..YE.GN.SAF..SVYIFNLS-------------------------
IDEFH_ORYSJ/297-399.YVLE........STGGFVKQHVLQ.TGDIFIIY.....KSSESEKLVVRGEKAI-------------------------
REM17_ARATH/617-714.TYVR.......PGWSRFCDANGMS.QGQQFTFK..LV.Q..KHGPPVMYLSLSE-------------------------
REM8_ARATH/249-346.IFGG.......NDWKSFCAANEVG.AGESLTLE..LI.R..GGLSPLFKFFSKI-------------------------
Y3216_ORYSJ/742-824.ISLQ.......SGWKAFVTAHDLQ.MGDFLVFS..YD.GI.SKL..KVLIFGPS-------------------------
Y5800_ARATH/217-305.SRFS.......GGWSRLAKELGLL.VGDVCTFK..LI....KPTEMRVKV...S-------------------------
ARFJ_ORYSJ/125-227.HLLT.......TGWSPFVNKKQLT.AGDSIVFM......RDEGGNIHVGLRRAK-------------------------
Y4469_ORYSJ/320-418CYLLG.......AGWRRFCEDNGVR.SGDVCVFT................VLDTT-------------------------
ARFT_ARATH/126-224.HSLT.......TGWNEFTTSKKLV.KGDVIVFV......RGETGELRVGIRRAR-------------------------
ARFQ_ARATH/119-221.HLLT.......TGWSKFVNSKKLI.AGDSVVFM......RKSADEMFIGVRRTP-------------------------
Y3222_ORYSJ/40-124ELVLQ.......PGWKEFVDGNGIE.EGDCLLFR..YS.GVSSSF..DVLIFDPS-------------------------
FUS3_ARATH/92-194.YVLE........NTGDFVNAHGLQ.LGDFIMVY.....QDLYSNNYVIQARKAS-------------------------
Q9XJ59_DAUCA/514-618.YVLE........NTGEFVKENGLQ.EGDFIVIY.....SDIKCGKYLIRGVKVR-------------------------
Y2608_ARATH/38-144.YVLT.......KGWSRYVKEKHLD.AGDVVLFHR....HRSDGGRFFIGWRRRG-------------------------
Y4474_ORYSJ/326-431CNLLP.......SGWKRFCQANGLL.VGDVCTFS.......VVEATLWHVAIDRV-------------------------
REM3_ARATH/154-251.AFIR.......GRWRSFCHANELK.PGSFYRFK..LV.R..NGTRPLLQLCFKV-------------------------
O49236_AVEFA/504-605.YLLE........NTGDFVRSNELQ.EGDFIVIY.....SDVKSGKYLIRGVKVR-------------------------
Y3160_ORYSJ/25-122.VVLQ.......SGWASYVSAHDLK.IGDFLVFK..YS.GD.SQL..KTLIFDSS-------------------------
Y4469_ORYSJ/21-118RAFLG.......RGWAEFAAAHGLG.VGWFVVLR.......HGGGVLAVEAFDTT-------------------------
REM20_ARATH/11-102.AYLT.......RGWPKFAEEHELK.NGEFMTFV..YD.GH.RTF..EVSVFDRW-------------------------
REM1_BRAOB/278-379.CYIR.......KGWREMCEANGVE.VNDSFVLE..LI.C..EAANPIFKLHSKI-------------------------
Y3701_ARATH/202-292.TIFS.......GGYSKLAREFPLM.VGDKCTFK..LI....KPFEFVLLTSKKN-------------------------
VRN1_ARATH/244-338.AKFS.......QGWYEFTLENNLG.EGDVCVFE..LL.RT.RDFVLKVTAFRVN-------------------------
REM9_ARATH/14-103...LT.......EGWKEFVEAHDLR.IGDFVVFR..HE.GD.MVF..HVTALGPS-------------------------
ABI3_ARATH/572-674.YLLE........NTGDFVKTNGLQ.EGDFIVIY.....SDVKCGKYLIRGVKVR-------------------------
Y3845_ORYSJ/137-228...LS.......GGWAGFALDHGLL.DGDATVFQ..LV.KP.TTF..KVHIIRAT-------------------------
REM6_ARATH/14-103...LT.......DGWKEFVEAHDLR.ISDFVIFK..HK.GD.MFF..DVTALGSS-------------------------
Y3204_ORYSJ/29-119.TILQ.......CGWEAFVDAHHIE.ENDSLLFR..HI.EN.SRF..EVLILDSD-------------------------
REM1_ARATH/285-386.FYLR.......RGWREMCEANGVG.VNDSFKLE..LV.W..EGANPMFKFCSKI-------------------------
Y5625_ARATH/46-159.YVLT.......KGWSRFVKDKQLD.PGDVVFFQR....HRSDSRRLFIGWRRRG-------------------------
ARFA_ORYSJ/122-224.HLLT.......TGWSTFVTSKKLI.SGDAFVYL......RSETGEQRVGVRRLV-------------------------
VAL1_ARATH/295-395.YVLE........GVTPCIQSMMLQ.AGDTVTFS......RVDPGGKLIMGSRKA-------------------------
Y4469_ORYSJ/143-236.VFLG.......GGWLQFLSFHGIS.RGDVVIFR..YE.GN.LVF..KISVFGPN-------------------------
ARFA_ARATH/124-226.HLLT.......TGWSVFVSSKKLV.AGDAFIFL......RGENEELRVGVRRHM-------------------------
REM3_ARATH/15-104...FA.......GGWDDFSAAHCLR.DDDVLVFR..LD.VK.MVF..HVTPSGRS-------------------------
REM4_ARATH/14-103...FA.......GGWKDFSVSHSVR.DDDLLSFR..HD.GG.MVF..HVSPFGRS-------------------------
REM15_ARATH/280-376.SLIK.......RGWRSFCSANGLR.AGSIITLK..LI.K..KRATLVLRLIPNE-------------------------
Y3918_ARATH/130-221...LS.......GGWRGFAIDHQLV.DGDAVVFH..LI.AR.TTF..KVYIIRVN-------------------------
Q9FNS6_9CONI/550-652.YLLE........NTGDFVRSNGLQ.EGDFIVLY.....SDTKTGKYMIRGVKVP-------------------------
REM16_ARATH/223-321...IS.......TGWKKFVQDNNLR.EGDVCVFE..PANSETKPLHLNVYIFRGE-------------------------
ARFT_ORYSJ/436-542.HTLA.......AGWSAFVKAKRLC.VGDTVIFM.....RRRPGGEPLVGVRRKP-------------------------
Y1934_ORYSJ/216-325.YVLT.......KGWSRFVKEKGLH.AGDVVGFYRSAA.SAGDDGKLFIDCKLVR-------------------------
Y3622_ARATH/14-101.VYLA.......RGWENFVADNELK.DGEFLTFV..FD.GY.KSY..EVSIYGRG-------------------------
Q8GT89_PRUPE/149-251.HLLT.......TGWSLFVGAKRLR.AGDSVLFI......RDEKSQLMIGVRRAN-------------------------
Y3216_ORYSJ/453-543.LVLG.......SGWESFVNAHDLN.MGDFLVFK..YN.GD.FLL..QVLIFDPS-------------------------
Y5698_ARATH/10-105VF.FT.......KGWQSFANDQSLE.FGDFLVFS..YD.GD.SRF..SVTIFAND-------------------------
Y5013_ARATH/14-110KFVMV.......NGWKRIVKDEDLK.GGDFLEFE..FD.GS.SCF..HFCIYEHR-------------------------
REML1_ARATH/97-193.MTLG.......DGWKSFVKANGLK.TGDTYTFK..LL.W..EDTTPVLSLCFEE-------------------------
RAV2_ARATH/188-293.YVLT.......KGWSRFVKEKNLR.AGDVVTFER....STGLERQLYIDWKVRS-------------------------
REM3_ARATH/286-383.FYMA.......HGWIRFCEANKLK.TGETFTLE..FV.RG.EGTTPMLKFCSEA-------------------------
REM17_ARATH/437-532.TFLK.......KGWTSFCQVNRIK.AGDSFKFK..LV.G..TWNKPVLSLCPTE-------------------------
Y1235_ORYSJ/289-381..RLS.......RGWCAFARGNCLE.EGDYCVFE..LV.AA.AEF..RVHIFRVV-------------------------
Y6112_ORYSJ/56-154.KKLD.......AGWSEFAVDNRLL.VGDACVFELVAM.GAAGGLEFQVQILRGG-------------------------
VAL3_ARATH/328-426.YVLE........GVTPFIQTLQLQ.AGDTVIFS......RLDPERKLILGFRKA-------------------------
Y5014_ARATH/34-109RFVMV.......SGWKKIVRDENLN.GGDLLSFE..FD.GS.HFF..NFSIFDHE-------------------------
REM17_ARATH/728-824.TIIK.......RGWTSFCQGNGLK.AGDSFKFK..LV.G..TGEKPVLSLCPAE-------------------------
REM7_ARATH/14-103...LT.......VGWKEFASAHDFR.VGDIIVFR..HE.GS.LVF..HVTALGPS-------------------------
REM15_ARATH/434-523.LRMV.......GGWQGFIQANDVK.ANESIMLE..LI.WE.EETSCVLKFCSKV-------------------------
Y7832_ORYSJ/124-227.VTLA.......KVWKKFRDDMDFV.DGDSVIFMRRRD.DDDDDGELYVGVRRQR-------------------------
REM16_ARATH/25-116TMAFR.......FGWDKFVKDHSLE.ENDLLVFK..FH.GV.SEF..EVLVFDGQ-------------------------
ARFT_ORYSJ/120-233.YMLGDLGVNDNDGWRGFVKAKRLA.TRDTVVFMRRGGGDGDGDGELLVGVRRAP-------------------------
REM17_ARATH/268-362.TYLP.......KGWTSFCQVNRIK.AGDSFKFK..LV.G..TWKKPVLSLCPTQ-------------------------
Y1235_ORYSJ/21-121.TFFT.......SGWPKFVQDQALR.ELEFVVFR..YD.GN.TRF..TAMVFDRT-------------------------
REM4_ARATH/307-403.FY.N.......RGCQDFFVANGVKNVGDPFTLE..VI.RG..GPSPILKICSKV-------------------------
REM6_ARATH/391-491.MVLG.......SGLREFCNAIGVK.AYESVVLE..LV.WEETTTLPMFKFCSKI-------------------------
REM17_ARATH/15-105...LT.......DGWEDFAFAHDLR.TGDIVVFR..LE.GE.MVF..HVTALGPS-------------------------
ARFM_ARATH/124-228.HMFT.....SGGGWSVFATTKRLI.VGDIFVLL......RGENGELRFGIRRAK-------------------------
REM1_BRAOB/142-240.FYIT.......RGWANFCSANGLI.RGDFCYFK..LS.E..SGERPVLLLCSHE-------------------------
Y2531_ARATH/19-114YFMEK.......SGWEKFVSDNALG.ASEFLTFT..HK.GN.MRF..TVNIFMQD-------------------------
REM6_ARATH/285-378.FYSR.......GGWRSFCRENGLK.PGDSVTFK..LE.S..SNTKTPLLLFSIA-------------------------
Y4765_ORYSJ/302-404.YVLE........STGGFVKHHGLQ.TGDIFIIY.....KSSESGKFVVRGEKAI-------------------------
REM14_ARATH/387-485.LGMV.......GGWKGFIQANGVK.ANESIMLE..LI.WE.EETSCVLKFCSKV-------------------------
REM6_ARATH/132-227.VIVA.......GGWKSLCTESKLE.VGDSCTFK..LL.H..NAKMPVFRLCSKL-------------------------
ARFC_ARATH/159-261.HLLT.......TGWSAFVNKKKLV.SGDAVLFL......RGDDGKLRLGVRRAS-------------------------
ARFV_ORYSJ/128-230.HLLT.......TGWSTFVNQKKLV.AGDSIVFL......RTRHGELCVGIRRAK-------------------------
Q8H6E4_MARPO/72-173.YVFT.......KSWSCFLKGKKLE.AGDTVSFER......GPNQELYIDFRRRL-------------------------
REM9_ARATH/149-244.VYLV.......GGWTTFCTENKLD.VGDSCTFK..LL.Q..KAKTPVFQLCSRT-------------------------
REM5_ARATH/152-247.VFIA.......GGWTSLCTANKLE.VGDSCTFK..LL.R..NPKIPVFRLCSRP-------------------------
Y3204_ORYSJ/416-516AQMIT.......TGWRHFVHDNHLQ.IEDICLFQ..LM.NDESKLTMTVHIIRRN-------------------------

PF09217

T2E2_ECOLX/12-168ITRWV-------EAAH.FRILKI---TGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPGA....LISG
Q9JZ51_NEIMB/24-168ITGFG-------KNFE.FLSDKY---SGSLLVLC....RACYKDLLFHAFVLSSDEDIEIFIAET.NILPGS....LYLP
A8AM36_CITK8/12-167ITRWG-------GGKNPLQDPEN---TGALALLAFD.HHQGSDSQFVDIWVCHNAEEEDIVESSLGEIVPGS....LVYG
A8G987_SERP5/10-170ITCWG-------GQKSPVQNQNN---TGAIAIFAFYTPENLKDCGLVEAWVCCTVEEEDLLEAIIGEVLPGT....ARSG
Q64Q06_BACFR/11-156ITRFG-------KGFP.FFEEDN---VGDLLIIA......QQSEDYYYGFVLQTDQDIDDFFAYF.NLSPEKTNQLIDVT
A5FU96_ACICJ/12-167LTNFG-------GGRSALLDPDS---TGALAVFAFL.PHGPGRQMECHVWVCDQGAEADLLEERIGPVEPKA....PVVW

PF03754

Y2741_ARATH/67-178-----
Y1592_ARATH/161-278-----
Y1593_ARATH/158-265-----
Y3485_ARATH/207-323-----
Y2142_ARATH/58-169-----
Y2467_ARATH/107-221-----
A5BFF6_VITVI/91-205-----
Y2172_ARATH/127-239-----
Y3961_ARATH/185-307-----
A5BRC9_VITVI/168-270-----
Y5850_ARATH/244-384-----
Y2881_ARATH/40-157-----
Y2146_ARATH/7-115-----
Y1203_ARATH/184-298-----

PF02362

NGA2_ARATH/23-129-----
REM23_ARATH/19-114-----
Y5809_ARATH/18-113-----
Y5800_ARATH/20-115-----
Y3209_ORYSJ/37-142-----
REM7_ARATH/171-249-----
Y3701_ARATH/25-116-----
Y3216_ORYSJ/150-240-----
Y1664_ARATH/9-100-----
LEC2_ARATH/171-272-----
REM14_ARATH/237-333-----
Y1086_ORYSJ/6-97-----
REM1_ARATH/162-259-----
REML1_ARATH/252-347-----
REM1_ARATH/10-92-----
REML1_ARATH/582-676-----
Y3896_ARATH/30-122-----
REM1_BRAOB/10-92-----
REM4_ARATH/169-266-----
RAVL3_ARATH/178-286-----
Y5772_ARATH/13-105-----
REM5_ARATH/14-103-----
Y3440_ARATH/16-107-----
REM17_ARATH/154-250-----
RAVL4_ARATH/183-289-----
ARFR_ARATH/128-230-----
REM8_ARATH/149-244-----
REM14_ARATH/131-226-----
ARFM_ORYSJ/128-234-----
REM12_ARATH/193-289-----
Y1060_ARATH/125-222-----
REM12_ARATH/341-436-----
Y3204_ORYSJ/248-349-----
Y3205_ORYSJ/29-119-----
Y5828_ARATH/127-218-----
VRN1_ARATH/5-98-----
IDEFH_ORYSJ/297-399-----
REM17_ARATH/617-714-----
REM8_ARATH/249-346-----
Y3216_ORYSJ/742-824-----
Y5800_ARATH/217-305-----
ARFJ_ORYSJ/125-227-----
Y4469_ORYSJ/320-418-----
ARFT_ARATH/126-224-----
ARFQ_ARATH/119-221-----
Y3222_ORYSJ/40-124-----
FUS3_ARATH/92-194-----
Q9XJ59_DAUCA/514-618-----
Y2608_ARATH/38-144-----
Y4474_ORYSJ/326-431-----
REM3_ARATH/154-251-----
O49236_AVEFA/504-605-----
Y3160_ORYSJ/25-122-----
Y4469_ORYSJ/21-118-----
REM20_ARATH/11-102-----
REM1_BRAOB/278-379-----
Y3701_ARATH/202-292-----
VRN1_ARATH/244-338-----
REM9_ARATH/14-103-----
ABI3_ARATH/572-674-----
Y3845_ORYSJ/137-228-----
REM6_ARATH/14-103-----
Y3204_ORYSJ/29-119-----
REM1_ARATH/285-386-----
Y5625_ARATH/46-159-----
ARFA_ORYSJ/122-224-----
VAL1_ARATH/295-395-----
Y4469_ORYSJ/143-236-----
ARFA_ARATH/124-226-----
REM3_ARATH/15-104-----
REM4_ARATH/14-103-----
REM15_ARATH/280-376-----
Y3918_ARATH/130-221-----
Q9FNS6_9CONI/550-652-----
REM16_ARATH/223-321-----
ARFT_ORYSJ/436-542-----
Y1934_ORYSJ/216-325-----
Y3622_ARATH/14-101-----
Q8GT89_PRUPE/149-251-----
Y3216_ORYSJ/453-543-----
Y5698_ARATH/10-105-----
Y5013_ARATH/14-110-----
REML1_ARATH/97-193-----
RAV2_ARATH/188-293-----
REM3_ARATH/286-383-----
REM17_ARATH/437-532-----
Y1235_ORYSJ/289-381-----
Y6112_ORYSJ/56-154-----
VAL3_ARATH/328-426-----
Y5014_ARATH/34-109-----
REM17_ARATH/728-824-----
REM7_ARATH/14-103-----
REM15_ARATH/434-523-----
Y7832_ORYSJ/124-227-----
REM16_ARATH/25-116-----
ARFT_ORYSJ/120-233-----
REM17_ARATH/268-362-----
Y1235_ORYSJ/21-121-----
REM4_ARATH/307-403-----
REM6_ARATH/391-491-----
REM17_ARATH/15-105-----
ARFM_ARATH/124-228-----
REM1_BRAOB/142-240-----
Y2531_ARATH/19-114-----
REM6_ARATH/285-378-----
Y4765_ORYSJ/302-404-----
REM14_ARATH/387-485-----
REM6_ARATH/132-227-----
ARFC_ARATH/159-261-----
ARFV_ORYSJ/128-230-----
Q8H6E4_MARPO/72-173-----
REM9_ARATH/149-244-----
REM5_ARATH/152-247-----
Y3204_ORYSJ/416-516-----

PF09217

T2E2_ECOLX/12-168PAGQI
Q9JZ51_NEIMB/24-168KKQEV
A8AM36_CITK8/12-167PANEI
A8G987_SERP5/10-170PSAQI
Q64Q06_BACFR/11-156QASTP
A5FU96_ACICJ/12-167QPGEI

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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