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142  structures 4984  species 3  interactions 18087  sequences 103  architectures

Clan: IIaaRS-ABD (CL0458)

Summary

Class II aaRS Anticodon-binding domain-like Add an annotation

This superfamily is characterised by including the anticodon-binding domain of Class II aaRS and the Brix domain.

This clan contains 2 families and the total number of domains in the clan is 18087. The clan was built by P Coggill.

Members

This clan contains the following 2 member families:

HGTP_anticodon HGTP_anticodon2

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
HGTP_anticodon (PF03129) 17881 (98.9%) View
HGTP_anticodon2 (PF12745) 206 (1.1%) View
Total: 2 Total: 18087 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 3 interactions for this clan. More...

Interacting families
A B
HGTP_anticodon tRNA-synt_2b
HGTP_anticodon
ProRS-C_1

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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