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70  structures 3740  species 3  interactions 11176  sequences 59  architectures

Clan: Succ_CoA_synth (CL0506)

Summary

Succinyl-CoA synthetase flavodoxin domain superfamily Add an annotation

This superfamily includes the flavodoxin like domain of succinyl-CoA synthetase and other related enzymes.

This clan contains 2 families and the total number of domains in the clan is 11176. The clan was built by A Bateman.

Members

This clan contains the following 2 member families:

Ligase_CoA Succ_CoA_lig

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Ligase_CoA (PF00549) 8836 (79.1%) View
Succ_CoA_lig (PF13607) 2340 (20.9%) View
Total: 2 Total: 11176 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 3 interactions for this clan. More...

Interacting families
A B
Ligase_CoA Ligase_CoA
CoA_binding
ATP-grasp_2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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