Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
267  structures 5456  species 3  interactions 15069  sequences 170  architectures

Clan: DSRM (CL0196)

Summary

DSRM-like clan Add an annotation

This clan contains RNA-binding domains.

This clan contains 3 families and the total number of domains in the clan is 15069. The clan was built by A Bateman.

Members

This clan contains the following 3 member families:

DND1_DSRM dsrm Ribosomal_S5

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

Loading domain graphics...

Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
dsrm (PF00035) 8915 (59.2%) View
Ribosomal_S5 (PF00333) 5805 (38.5%) View
DND1_DSRM (PF14709) 349 (2.3%) View
Total: 3 Total: 15069 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls

Hide

This tree shows the occurrence of the domains in this clan across different species. More...

Loading...

Interactions

There are 3 interactions for this clan. More...

Interacting families
A B
Ribosomal_S5 Ribosomal_S5
dsrm dsrm
Ribonuclease_3

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

Loading structure mapping...