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38  structures 4060  species 1  interaction 6337  sequences 17  architectures

Clan: GatB_YqeY (CL0279)

Summary

YqeY-like superfamily Add an annotation

This superfamily includes a domain from GatB as well as one from YqeY. Although being structurally distinct they share a common sequence relationship.

This clan contains 2 families and the total number of domains in the clan is 6337. The clan was built by A Bateman.

Members

This clan contains the following 2 member families:

GatB_Yqey YqeY

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
GatB_Yqey (PF02637) 3872 (61.1%) View
YqeY (PF09424) 2465 (38.9%) View
Total: 2 Total: 6337 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There is 1 interaction for this clan. More...

Interacting families
A B
GatB_Yqey GatB_N

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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