Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 4993  species 0  interactions 52424  sequences 68  architectures

Clan: LysE (CL0292)

Summary

LysE transporter superfamily Add an annotation

This clan includes a diverse range of transporter families [1].

This clan contains 10 families and the total number of domains in the clan is 52424. The clan was built by A Bateman.

Literature references

  1. Vrljic M, Garg J, Bellmann A, Wachi S, Freudl R, Malecki MJ, Sahm H, Kozina VJ, Eggeling L, Saier MH Jr, Eggeling L, Saier MH Jr; , J Mol Microbiol Biotechnol. 1999;1:327-336.: The LysE superfamily: topology of the lysine exporter LysE of Corynebacterium glutamicum, a paradyme for a novel superfamily of transmembrane solute translocators. PUBMED:10943564 EPMC:10943564

Members

This clan contains the following 10 member families:

BacA Cad Colicin_V DUF204 DUF475 LysE MarC TauE TerC UPF0016

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

Loading domain graphics...

Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
LysE (PF01810) 13176 (25.1%) View
TauE (PF01925) 12351 (23.6%) View
TerC (PF03741) 6495 (12.4%) View
BacA (PF02673) 4568 (8.7%) View
MarC (PF01914) 4024 (7.7%) View
DUF204 (PF02659) 3883 (7.4%) View
Colicin_V (PF02674) 3878 (7.4%) View
UPF0016 (PF01169) 2676 (5.1%) View
Cad (PF03596) 922 (1.8%) View
DUF475 (PF04332) 451 (0.9%) View
Total: 10 Total: 52424 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls

Hide

This tree shows the occurrence of the domains in this clan across different species. More...

Loading...