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53  structures 3218  species 0  interactions 10624  sequences 124  architectures

Clan: PepSY (CL0320)

Summary

PepSY domain-like superfamily Add an annotation

This family includes the PepSY domain as well as a family of uncharacterised proteins.

This clan contains 8 families and the total number of domains in the clan is 10624. The clan was built by A Bateman.

Members

This clan contains the following 8 member families:

BLIP DUF2874 DUF3192 DUF3862 PepSY PepSY_2 SmpA_OmlA YPEB

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
PepSY (PF03413) 4684 (44.1%) View
SmpA_OmlA (PF04355) 2731 (25.7%) View
DUF2874 (PF11396) 1589 (15.0%) View
PepSY_2 (PF13670) 928 (8.7%) View
YPEB (PF14620) 303 (2.9%) View
DUF3862 (PF12978) 255 (2.4%) View
DUF3192 (PF11399) 113 (1.1%) View
BLIP (PF07467) 21 (0.2%) View
Total: 8 Total: 10624 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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