Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
60  structures 1654  species 1  interaction 2070  sequences 16  architectures

Clan: PgaPase (CL0379)

Summary

Pyroglutamate aminopeptidase superfamily Add an annotation

This is a collection of pyrrolidone carboxyl peptidase or pyroglutamate aminopeptidase families from bacteria and archaea.

This clan contains 2 families and the total number of domains in the clan is 2070. The clan was built by A Bateman.

Members

This clan contains the following 2 member families:

DUF976 Peptidase_C15

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

Loading domain graphics...

Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Peptidase_C15 (PF01470) 2041 (98.6%) View
DUF976 (PF06162) 29 (1.4%) View
Total: 2 Total: 2070 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls

Hide

This tree shows the occurrence of the domains in this clan across different species. More...

Loading...

Interactions

There is 1 interaction for this clan. More...

Interacting families
A B
Peptidase_C15 Peptidase_C15

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

Loading structure mapping...