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55  structures 767  species 2  interactions 1038  sequences 13  architectures

Clan: SOR (CL0503)

Summary

Superoxide reductase-like superfamily Add an annotation

According to SCOP this superfamily includes the superoxide reductase domain as well as the C-terminal domain of desulfoferrodoxin.

This clan contains 2 families and the total number of domains in the clan is 1038. The clan was built by A Bateman.

Literature references

  1. Stout J, Van Driessche G, Savvides SN, Van Beeumen J;, Protein Sci. 2007;16:589-601.: X-ray crystallographic analysis of the sulfur carrier protein SoxY from Chlorobium limicola f. thiosulfatophilum reveals a tetrameric structure. PUBMED:17327392 EPMC:17327392

Members

This clan contains the following 2 member families:

Desulfoferrodox SoxY

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Desulfoferrodox (PF01880) 594 (57.2%) View
SoxY (PF13501) 444 (42.8%) View
Total: 2 Total: 1038 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 2 interactions for this clan. More...

Interacting families
A B
Desulfoferrodox Desulfoferrodox
Desulfoferrod_N

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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