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11  structures 380  species 0  interactions 6736  sequences 168  architectures

Clan: Vps51 (CL0295)

Summary

Vps51 domain superfamily Add an annotation

This clan includes an N-terminal domain from several vesicle transport proteins that are related to Vps51.

This clan contains 16 families and the total number of domains in the clan is 6736. The clan was built by A Bateman.

Members

This clan contains the following 16 member families:

COG2 COG5 COG6 Dor1 DUF2450 Exo70 Sec15 Sec3_C Sec3_C_2 Sec5 Sec6 Sec8_exocyst Vps51 Vps52 Vps53_N Zw10

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Exo70 (PF03081) 882 (13.1%) View
Vps51 (PF08700) 831 (12.3%) View
Sec6 (PF06046) 580 (8.6%) View
Vps52 (PF04129) 461 (6.8%) View
DUF2450 (PF10475) 433 (6.4%) View
Sec15 (PF04091) 418 (6.2%) View
Sec3_C (PF09763) 414 (6.1%) View
Dor1 (PF04124) 407 (6.0%) View
Vps53_N (PF04100) 406 (6.0%) View
COG6 (PF06419) 369 (5.5%) View
Sec5 (PF15469) 361 (5.4%) View
COG2 (PF06148) 316 (4.7%) View
Sec8_exocyst (PF04048) 297 (4.4%) View
COG5 (PF10392) 280 (4.2%) View
Zw10 (PF06248) 279 (4.1%) View
Sec3_C_2 (PF15278) 2 (0.0%) View
Total: 16 Total: 6736 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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