HMMER3/b [3.0 | March 2010] NAME fn1 ACC PF00039.13 DESC Fibronectin type I domain LENG 39 ALPH amino RF no CS yes MAP yes DATE Thu Oct 4 07:57:21 2012 NSEQ 20 EFFN 4.995117 CKSUM 1070365773 GA 20.70 20.70; TC 20.80 21.30; NC 20.50 20.60; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.8266 0.71952 STATS LOCAL VITERBI -8.4172 0.71952 STATS LOCAL FORWARD -4.1502 0.71952 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.00570 2.26206 2.98831 2.66877 3.53954 2.33327 3.62550 3.47073 2.80723 3.06638 3.84042 3.20515 3.91792 2.84726 2.74895 2.87847 2.86740 3.08057 3.53322 3.12755 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.00000 * 1 5.08468 0.04552 6.38921 6.44130 6.55305 5.21499 6.90321 6.33160 6.45098 5.92696 7.12184 6.32869 5.94551 6.72802 6.29378 5.35172 5.62904 5.88260 7.35797 6.78273 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 2 3.07098 4.78680 3.95640 3.38845 1.66240 4.05217 2.75139 2.73090 3.33953 2.99755 3.89024 3.13184 4.43127 2.79536 2.29906 3.29745 2.84543 2.53582 5.36692 2.90798 2 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 3 3.56697 6.09156 0.77397 1.89746 5.41700 4.00655 4.45618 4.88816 3.38378 4.40948 5.21892 3.47703 4.56732 3.60041 3.94524 3.48534 2.39174 3.04484 6.57829 5.10854 3 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.49776 5.34579 0.94845 0.61958 0.77255 0.48576 0.95510 4 2.90372 5.39703 3.03064 1.74899 4.73804 3.62917 3.84249 4.21752 2.20986 3.69689 4.44711 3.09820 2.14006 2.22232 3.05554 2.28800 3.13696 3.78726 5.82819 4.42261 4 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01159 4.85962 5.58196 0.61958 0.77255 0.16468 1.88497 5 2.67915 5.55891 2.03739 1.99753 4.90401 2.99034 4.00386 4.39097 2.28038 3.86420 4.59998 2.37570 3.44231 2.32000 3.23529 3.00615 3.27687 3.94965 5.99109 2.68331 5 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.24707 5.34579 1.54109 0.61958 0.77255 0.48576 0.95510 6 2.52597 4.91104 3.60730 2.63244 4.20082 3.82387 4.19240 3.57114 3.08981 2.39265 4.11414 3.54543 4.27617 3.42099 3.50000 2.45860 1.09536 3.28798 5.57145 4.29826 6 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00903 5.10775 5.83009 0.61958 0.77255 0.23402 1.56708 7 3.18709 5.26156 3.68259 3.10751 4.50517 1.31961 4.19736 3.89214 2.90278 2.60030 4.35737 3.59070 4.40671 2.17383 2.09813 3.25334 3.41500 2.71981 5.77238 4.48596 7 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 8 3.05194 5.08677 3.57045 3.01042 4.28297 3.92452 4.14097 2.96099 2.44345 3.32592 2.90665 2.89383 4.31150 2.73520 2.62344 2.54682 1.92677 2.26715 5.62035 2.93624 8 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 9 3.06915 4.78246 3.95870 2.58622 2.33425 4.05175 2.67234 2.54227 3.34439 2.99316 3.17414 3.16491 4.43088 3.64460 3.69516 2.19383 1.93255 2.53336 5.36533 4.13235 9 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 10 5.58910 6.38851 6.25102 6.29532 2.04431 5.90688 4.44797 5.10013 6.05869 4.15452 5.58880 5.40150 6.15323 5.60817 5.78548 5.34882 5.77341 5.08354 4.51112 0.24766 10 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 11 2.50920 5.51884 3.30327 2.74635 4.85219 3.81893 2.59376 4.32814 2.20054 2.81075 4.56304 2.77156 4.21171 1.81200 2.27389 2.53929 3.27180 3.19090 5.95756 4.55648 11 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 12 3.13957 5.00510 3.79228 2.49942 4.18278 4.04969 4.26919 1.60453 2.44274 3.21715 4.10204 3.69194 4.43330 2.23254 3.50744 3.29109 3.36868 1.65409 5.57295 4.31373 12 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 13 3.63835 6.08316 3.16159 3.01429 5.44977 0.83763 2.50933 4.99234 3.34398 4.47454 5.29752 1.90779 4.63764 2.86192 3.80876 3.56939 3.91842 4.55955 6.58327 5.14543 13 - T 2.68622 4.42229 2.77524 2.73127 3.46358 2.40468 3.72499 3.29358 2.67745 2.69359 4.24694 2.90351 2.73744 3.18151 2.89805 2.37891 2.77524 2.98523 4.58481 3.61507 0.08644 2.51953 6.06814 0.20138 1.70157 0.48576 0.95510 14 3.44056 6.00782 1.14989 1.44404 5.32302 3.96163 4.32642 4.82930 3.18379 4.29946 3.08828 3.41612 4.47532 2.13528 3.72106 3.36127 3.69405 4.38653 6.43732 4.97690 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 15 3.04809 5.50902 3.31550 2.33156 4.83715 3.82703 4.01254 2.94922 2.49601 3.80512 4.55517 3.30237 4.21972 2.04491 2.54935 1.89315 1.85462 3.89073 5.95029 4.55454 16 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 16 5.56442 6.36705 6.25794 6.28957 2.24485 5.90944 4.43272 5.08048 6.04069 4.14539 5.56739 5.38833 6.14509 5.59087 5.76839 5.33264 5.74198 5.05658 0.34982 2.21554 17 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 17 2.45255 5.51137 2.59717 1.64902 4.84172 3.81473 3.13440 4.31749 2.74451 2.11610 4.55598 3.28798 4.20822 2.77075 2.69801 2.67685 3.26736 3.89410 5.95284 3.01431 18 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 18 4.51705 6.41012 5.47272 4.22021 6.18741 4.92416 4.53938 5.33970 1.05857 4.57997 5.51022 4.43314 5.20095 3.66482 0.68244 4.47495 4.54027 5.06576 6.45082 5.48337 19 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 19 3.04517 5.25912 3.43790 2.59845 4.50111 3.87354 4.07596 3.92004 2.57226 3.06311 3.49507 3.40093 1.83525 2.54773 2.78869 3.07576 2.07677 2.71018 5.75876 3.10789 20 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 20 3.03428 5.51962 2.87617 2.08352 4.85417 3.21715 2.39847 4.33277 2.42138 3.26776 3.17678 3.28359 4.20523 2.59719 2.55719 2.48810 3.26543 2.95913 5.95865 2.71104 21 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 21 3.04908 5.54429 2.31490 1.87265 4.88138 2.95936 3.38255 4.36290 2.75214 2.25338 4.58761 2.86701 4.21452 1.83502 3.24495 3.01338 3.28089 3.18829 5.98117 4.57315 22 - T 2.68646 4.42253 2.77547 2.73106 3.46382 2.40504 3.72522 3.29382 2.67768 2.69383 4.24560 2.90336 2.73767 3.18174 2.89643 2.37873 2.77495 2.98546 4.58505 3.61531 0.56127 0.85050 6.06814 0.16108 1.90533 0.48576 0.95510 22 2.21280 5.16519 4.47987 4.32794 5.77533 0.64659 5.48626 5.27947 4.57395 4.91446 5.66930 2.73616 4.69596 4.75893 4.87428 1.74901 3.73713 4.46198 7.06413 5.89367 25 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 23 2.24039 5.04102 3.61285 3.05220 3.00034 3.93988 2.27601 3.61377 2.28668 3.27531 3.17985 2.50854 4.32596 2.93106 3.46495 2.54168 3.28523 2.67576 3.66009 3.14542 26 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 24 2.73142 4.70796 4.14640 3.57068 3.83074 4.10807 4.37351 2.42450 2.68648 2.57679 1.91900 3.92116 4.48321 2.88511 1.99973 3.36797 3.31714 1.98852 5.30160 4.08611 27 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 25 2.40819 3.44267 4.99126 2.87068 3.57224 4.25660 4.58659 2.91175 4.18005 1.54912 2.04548 4.39678 4.62085 4.32385 4.21191 3.56498 3.32672 1.92876 3.37582 2.86909 28 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 26 3.03646 5.53596 2.78721 1.82150 4.87631 3.81071 3.99893 4.35896 2.73549 2.69259 4.57799 2.76646 4.20465 2.00790 2.32688 2.28089 3.26767 2.84726 5.97132 4.56320 29 - E 2.68628 4.42235 2.77491 2.73133 3.46364 2.40523 3.72402 3.29364 2.67751 2.69365 4.24700 2.90357 2.73750 3.18157 2.89811 2.37897 2.77530 2.98529 4.58487 3.61309 0.20540 1.69631 6.06814 0.10549 2.30141 0.48576 0.95510 27 5.08468 0.04552 6.38921 6.44130 6.55305 5.21499 6.90321 6.33160 6.45098 5.92696 7.12184 6.32869 5.94551 6.72802 6.29378 5.35172 5.62904 5.88260 7.35797 6.78273 31 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 28 3.05290 5.11274 3.55151 2.40847 4.31479 3.91832 4.13175 3.11088 2.97384 3.35443 4.19447 3.49062 4.30565 2.19482 2.43147 3.13044 1.52475 2.78419 3.89237 3.07178 32 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00711 5.34579 6.06814 0.61958 0.77255 0.48576 0.95510 29 5.08468 0.04552 6.38921 6.44130 6.55305 5.21499 6.90321 6.33160 6.45098 5.92696 7.12184 6.32869 5.94551 6.72802 6.29378 5.35172 5.62904 5.88260 7.35797 6.78273 33 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.15561 5.34579 1.97082 0.61958 0.77255 0.48576 0.95510 30 3.02865 4.42199 4.86726 4.26070 2.01574 4.18519 4.50952 2.41650 2.71818 1.42484 3.52602 4.30509 4.54813 4.22556 4.12392 3.49142 2.76729 2.35661 5.03728 2.47986 34 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00824 5.19842 5.92076 0.61958 0.77255 0.92144 0.50741 31 4.86977 6.34904 5.72109 5.78628 6.63542 0.05133 6.63659 6.68666 6.07791 6.06815 7.16049 5.89376 5.72872 6.31597 6.03773 5.09595 5.41303 6.01458 7.26751 6.82262 35 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.10208 5.19842 2.39126 0.61958 0.77255 0.92144 0.50741 32 2.51665 5.38086 3.19283 2.35759 3.05253 2.22576 3.90649 4.16820 2.65133 3.67510 4.43011 1.76360 4.10890 2.55107 2.52857 2.91013 3.16726 3.75825 5.82926 4.43509 36 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00905 5.10539 5.82774 0.61958 0.77255 0.46649 0.98671 33 3.20517 5.71578 2.65689 2.76774 5.05994 1.09245 4.13524 4.54869 2.91702 4.02713 4.78597 2.34668 4.31243 2.79311 2.51763 2.73955 3.44848 4.11217 6.16189 4.73780 37 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00770 5.26603 5.98838 0.61958 0.77255 0.75232 0.63728 34 3.04495 5.20651 3.47649 2.91099 4.44770 3.87712 4.07238 2.87125 2.21319 3.46372 4.28542 3.42021 4.26611 3.22914 1.61655 1.84144 2.52490 2.78345 5.71190 4.39260 38 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00770 5.26603 5.98838 0.61958 0.77255 0.34919 1.22166 35 3.19753 5.11077 4.52640 4.22462 5.07833 0.56753 5.20546 4.62567 4.24389 4.29630 5.13274 4.33142 2.60021 4.52798 4.52876 2.48256 3.68457 4.10277 2.72196 5.21530 39 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.23770 5.34579 1.57605 0.61958 0.77255 0.48576 0.95510 36 2.98439 5.46550 2.43425 1.56813 4.79842 3.73375 2.82618 4.27569 2.66847 2.45586 4.51212 3.20452 4.13904 3.03776 1.92721 2.94841 3.21612 3.85089 5.89914 4.49692 40 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00894 5.11704 5.83939 0.61958 0.77255 0.70767 0.67883 37 1.80139 4.50081 4.99686 4.39628 2.09964 4.28490 4.58343 2.12906 4.20153 2.58262 3.57362 4.41551 4.64300 4.34005 4.23765 3.59716 3.35434 2.38883 1.63021 3.83743 41 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00822 5.20141 5.92376 0.61958 0.77255 0.91474 0.51186 38 2.68399 5.48027 3.23571 2.67775 4.82562 3.75432 2.54628 4.30643 1.97971 3.78243 4.52223 2.83498 4.14685 2.09612 2.31190 2.54007 2.16738 3.87136 5.90990 4.50636 42 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00822 5.20141 5.92376 0.61958 0.77255 0.28842 1.38408 39 5.08468 0.04552 6.38921 6.44130 6.55305 5.21499 6.90321 6.33160 6.45098 5.92696 7.12184 6.32869 5.94551 6.72802 6.29378 5.35172 5.62904 5.88260 7.35797 6.78273 43 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00479 5.34347 * 0.61958 0.77255 0.00000 * //