HMMER3/b [3.0 | March 2010] NAME Crp ACC PF00325.15 DESC Bacterial regulatory proteins, crp family LENG 32 ALPH amino RF no CS yes MAP yes DATE Sun Oct 7 09:41:03 2012 NSEQ 12 EFFN 8.206055 CKSUM 2529611046 GA 20.50 14.00; TC 20.50 14.20; NC 20.40 13.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.6644 0.71979 STATS LOCAL VITERBI -7.0325 0.71979 STATS LOCAL FORWARD -4.4744 0.71979 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.65312 4.53594 3.28363 2.70441 3.75258 2.61833 4.63564 2.46205 2.91339 1.93624 3.43876 3.66247 4.35460 3.26977 2.42513 2.84975 2.52761 2.63058 5.59371 4.26837 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.00000 * 1 4.80829 5.93991 6.93943 6.45760 4.57797 6.51822 7.13384 1.07253 6.42449 0.74077 4.26936 6.70817 6.48844 6.35014 6.43965 6.00574 5.04080 2.11059 6.96338 5.99651 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 2 2.27539 5.75259 2.11536 2.99725 5.08265 4.06588 4.25599 4.55560 2.27663 4.05214 4.80052 3.54177 1.85478 3.35864 2.04164 3.25829 2.69018 2.51790 6.19737 4.79854 2 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 3 4.95808 6.10255 7.00216 6.44299 4.30393 6.49811 6.83791 2.19232 6.34732 1.05187 0.99046 6.69274 6.40116 6.10332 6.24272 5.94172 5.15829 2.13591 6.64834 5.76033 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 4 2.33801 5.59642 4.20340 3.70539 5.52161 2.96527 4.90168 4.99131 1.93570 4.54412 5.30276 4.11242 4.78426 4.04403 4.12737 1.10656 1.49653 4.44661 6.70279 5.38160 4 - - 2.68645 4.42252 2.77546 2.73150 3.46381 2.40540 3.72521 3.29381 2.67768 2.69182 4.24717 2.90374 2.73766 3.18173 2.89828 2.37768 2.77546 2.98545 4.58504 3.61530 0.16768 1.87810 6.50686 0.68583 0.70051 0.48576 0.95510 5 4.47900 6.50202 5.02263 4.21149 5.23805 5.03899 2.00191 5.33292 3.02814 4.67977 5.59680 2.30461 5.36429 3.98403 0.64568 4.45436 4.59815 5.03976 2.65645 4.97876 7 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 6 2.66856 5.95718 3.49636 2.43179 5.31749 2.84443 4.41486 4.80467 3.18759 4.28596 5.03804 2.71662 4.59288 0.84341 3.68785 3.41705 2.53022 4.36546 6.42138 5.00266 8 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 7 1.95114 6.92152 1.18736 1.06510 6.20389 4.43015 4.99084 5.76582 4.04347 5.20518 6.04759 3.87056 5.06639 2.47156 4.68552 4.06200 4.50015 5.29041 7.34445 5.77970 9 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 8 5.02076 6.13540 7.08578 6.59284 4.42881 6.66199 7.13202 0.54374 6.52635 1.13464 4.13443 6.88578 6.54349 6.31051 6.45531 6.18636 5.23754 3.25823 6.83882 5.92009 10 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 9 0.43125 5.62264 5.87899 5.92973 6.53370 1.29551 6.59597 6.08462 6.01377 5.76934 6.51041 5.31063 5.28439 6.05907 5.97563 3.93611 4.31754 5.09514 7.79594 6.86385 11 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 10 3.40923 5.93382 1.52769 1.92112 5.27874 4.12362 4.34582 4.76818 2.16670 4.23604 4.97921 1.91713 4.54443 2.42942 2.36991 3.36167 3.64368 4.32531 6.35978 4.94200 12 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 11 1.97925 5.09981 5.65220 5.07600 1.51671 4.90438 5.01008 2.31564 4.86606 2.07396 4.09041 5.01702 5.24327 4.95024 4.85995 4.22448 3.98108 3.28578 5.36091 1.34137 13 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 12 4.40133 2.39697 6.51823 6.01863 4.70356 5.96395 6.56656 1.69094 5.93326 0.84051 4.45428 6.14028 6.15255 6.06688 6.01120 5.37768 4.64872 1.50577 6.79650 5.66210 14 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 13 2.06976 5.69456 5.80782 5.86997 6.58494 0.22168 6.61822 6.15607 6.02822 5.83073 6.58407 5.34760 5.34135 6.08131 6.00759 4.01133 4.39356 5.17118 7.81132 6.89819 15 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 14 2.13860 1.84141 5.46899 4.98619 4.50165 4.38658 5.35429 3.83666 4.82123 1.06853 4.51213 4.85459 5.00906 4.98089 4.89452 1.92911 2.43324 3.57605 6.01079 4.84421 16 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 15 1.68787 5.46714 5.93493 5.87102 6.33505 4.26938 6.43749 5.83302 5.78763 5.53331 6.26587 5.17742 5.14870 5.86885 5.78616 1.60653 0.59961 4.89282 7.67674 6.66741 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 16 3.65500 5.05157 5.35553 4.75220 4.16605 4.83132 5.16294 1.62822 4.47403 2.39465 4.12417 4.88476 2.72651 4.76242 1.08981 4.14687 3.88983 1.94725 5.76397 4.58460 18 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 17 4.53848 6.49639 4.09814 0.31233 6.03057 4.88128 5.73214 4.67564 4.78931 4.89517 6.04788 4.64206 5.57379 4.98402 5.23710 4.61215 4.92713 1.87600 7.44258 6.12601 19 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 18 3.56441 5.42717 5.60434 5.37570 5.64765 4.31401 6.02941 5.00635 5.23829 4.73509 2.34040 5.04471 5.13171 5.46443 5.34707 2.12048 0.40578 4.47399 7.09108 5.95977 20 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 19 2.34153 5.60784 6.60486 6.20523 5.19962 6.01995 7.13481 2.10884 6.19417 3.58408 4.88148 6.30983 6.31504 6.50664 6.39510 5.50403 4.69207 0.34739 7.43024 6.15820 21 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 20 3.58232 5.56172 4.90114 4.72559 6.19894 1.68159 5.87387 5.71052 4.93971 5.33642 6.08141 2.24439 5.08773 5.13663 5.24525 0.78672 1.86532 4.87182 7.47413 6.30255 22 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 21 6.19822 7.34698 6.69926 6.26709 7.23989 5.92875 6.68322 7.24903 5.04968 6.43454 7.56025 6.49167 6.50244 6.04109 0.03107 6.35737 6.46944 6.90525 7.71981 7.15010 23 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 22 3.54479 4.90835 5.48856 4.88055 3.95247 4.73421 5.07351 2.25686 4.67777 1.37778 2.34970 4.88815 5.08100 3.02970 4.69558 4.04969 1.90501 1.59743 5.54979 4.38408 24 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 23 5.21244 6.32461 7.19781 6.60308 1.83977 6.71065 6.87367 3.49607 6.49563 0.44004 2.67862 6.91242 6.47519 6.09416 6.30149 6.16795 5.38068 2.70275 6.56766 5.71284 25 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 24 3.59367 5.69136 4.37176 3.96924 5.79835 1.26133 5.13414 5.26221 1.39491 4.80677 5.57959 4.32076 4.94474 4.29417 4.19933 2.56444 1.42482 4.66653 6.93684 5.66383 26 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 25 3.49749 5.91535 1.63238 3.19996 5.26618 4.24629 4.37702 4.71978 1.68528 4.19498 2.73444 3.72277 4.63247 3.48473 1.38867 3.46772 3.71549 4.31605 6.30815 3.22447 27 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 26 5.46453 6.51319 7.22708 6.77806 1.71713 6.79884 6.39073 3.66674 6.66741 0.31691 4.05422 6.87184 6.59014 6.19242 6.42637 6.34737 5.63018 4.11562 6.20901 4.86314 28 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 27 2.45645 5.89116 3.64068 1.81808 5.25462 2.89152 4.31549 4.72633 2.45574 4.18735 4.93455 3.62313 4.54759 1.73746 1.45025 3.36354 3.62763 4.29330 6.29774 4.91330 29 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 28 2.31659 5.84019 2.48973 1.35330 5.18843 4.08323 4.27535 4.67391 1.66268 4.14382 4.88209 3.54937 4.48339 2.64915 2.32667 3.28655 3.55833 4.23297 6.26721 4.85771 30 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 29 3.28165 5.79515 2.40208 1.79688 5.14152 4.05318 4.24084 3.12835 1.57651 4.10074 4.83565 2.73229 4.44743 2.14218 2.74696 2.56325 3.51283 4.18652 6.22671 4.81514 31 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 30 3.87873 6.14649 3.82199 3.61044 5.96910 0.85520 4.97855 5.44562 1.35661 4.91474 5.71768 2.42377 5.01319 4.12598 4.04730 2.71921 4.22118 4.91948 7.00783 5.66135 32 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 31 4.48146 5.73434 6.47977 5.89757 4.22876 5.82094 6.17761 3.25410 5.73734 0.62834 1.94368 6.00369 5.96993 5.68834 5.69925 5.19105 3.00613 1.77476 6.32370 5.30929 33 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00458 5.78452 6.50686 0.61958 0.77255 0.48576 0.95510 32 4.85134 5.98624 6.93889 6.49440 4.60067 6.50331 7.14509 0.29304 6.43361 1.92665 4.31840 6.73333 6.51517 6.39457 6.45561 6.03797 5.09324 2.98964 6.97470 5.94320 34 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00308 5.78302 * 0.61958 0.77255 0.00000 * //