HMMER3/b [3.0 | March 2010] NAME Ribosomal_L36 ACC PF00444.13 DESC Ribosomal protein L36 LENG 38 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 16:04:52 2012 NSEQ 108 EFFN 6.990601 CKSUM 1706846534 GA 21.70 21.70; TC 22.00 21.80; NC 21.60 21.40; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.7606 0.71956 STATS LOCAL VITERBI -7.9015 0.71956 STATS LOCAL FORWARD -3.9653 0.71956 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.01893 3.07150 3.57865 3.30515 3.82271 3.10407 3.40206 2.78663 1.93129 3.03954 3.41831 3.16113 3.56185 2.86741 2.10798 2.87501 3.40349 2.44850 5.49448 3.74491 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.00000 * 1 5.09501 6.27424 6.68488 6.36439 2.30233 6.09383 5.77557 3.73839 6.17868 2.68380 0.30451 6.22257 6.26490 5.95114 6.04004 5.64363 5.33920 4.05789 5.77682 4.24167 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 2 4.61954 6.60225 5.19834 4.27353 6.34378 3.76600 4.75089 5.52409 0.25933 4.78720 5.70240 4.55077 5.36338 3.39274 2.65837 4.57329 4.68165 5.22905 6.68452 5.67571 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 3 3.36031 4.77268 5.14221 4.56613 3.90916 4.50002 4.11579 2.06756 4.38761 2.97244 3.91882 4.04295 4.88858 4.56871 4.46581 3.34216 2.91751 0.63789 5.44833 4.26536 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 4 3.25191 5.57990 3.58526 3.01983 4.86781 4.04895 2.53244 4.02842 1.89291 2.95725 4.63873 3.45616 4.43749 2.98966 1.28289 2.93658 3.47957 2.72595 6.04132 3.74322 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 5 1.72881 5.59027 3.57969 3.03229 5.01972 2.82086 4.27829 4.48429 2.70914 4.00569 4.76402 2.82215 3.10792 3.39087 3.51623 1.26708 2.59488 3.74128 6.16758 4.78642 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 6 1.96324 5.48287 3.94078 3.40701 5.06681 3.79830 4.56799 4.49511 2.91582 4.07825 4.87688 3.86110 4.61452 3.71851 2.81018 0.70999 3.64399 3.44596 6.28252 4.97084 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 7 3.53422 5.50190 6.48283 6.02415 4.81298 6.00314 6.76827 1.23682 5.98418 1.31815 4.52677 6.17708 6.18040 6.19911 6.12607 5.45093 4.58338 1.04141 6.98858 5.80184 7 - - 2.68561 4.42271 2.77566 2.73169 3.46400 2.40537 3.72540 3.29400 2.67620 2.69240 4.24736 2.90393 2.73786 3.18192 2.89789 2.37807 2.77566 2.98564 4.58523 3.61549 0.24539 1.53306 6.36249 0.99204 0.46334 0.48576 0.95510 8 3.41808 6.43276 4.92277 4.02362 6.05334 4.35952 4.64641 5.30878 0.41586 3.99582 5.50173 4.36671 5.19112 3.13421 2.05091 4.28324 4.42641 4.98560 6.57337 5.49011 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 9 2.88477 5.69473 3.00162 2.88790 5.03654 3.39899 4.15423 4.17355 1.11772 3.23945 4.73625 2.77466 3.52995 2.89006 2.49341 2.86052 3.05376 3.63904 6.12936 3.62547 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 10 3.26892 4.76549 4.66270 4.07622 3.17081 4.35848 4.65336 1.72885 3.48470 2.42301 2.68922 4.31065 3.72225 3.67339 1.22852 3.64064 3.05168 3.01996 5.37383 4.17923 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06119 5.64015 2.88591 0.61958 0.77255 0.48576 0.95510 11 3.39412 0.77839 2.80731 3.29807 4.90553 4.12829 2.61446 4.34547 3.32569 3.95298 4.78178 3.78618 4.62039 3.69780 3.13751 2.49478 3.67802 3.99626 6.17797 4.85311 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00559 5.58455 6.30690 0.61958 0.77255 0.35446 1.20915 12 2.90693 5.70562 2.40388 1.77029 5.05182 3.67754 4.15241 4.53858 1.74714 3.38106 4.74601 2.88961 2.87920 3.15220 2.08747 2.73711 3.42345 3.94264 6.13757 4.72593 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 13 3.01455 5.70027 1.70647 2.70343 4.13279 2.63921 2.28678 4.52943 2.13158 3.53808 4.74124 2.28435 4.35966 3.25016 3.24212 2.58078 3.42335 4.09031 6.13360 3.76661 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 14 2.70093 0.50147 3.04982 3.78291 5.23786 4.16543 4.99668 4.65888 3.90986 4.30136 5.13139 3.27696 4.80579 4.21412 3.35051 3.16350 3.84859 4.22356 6.55402 5.28089 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 15 3.20528 5.01839 3.52216 2.89936 4.16539 3.73458 4.19667 3.76034 1.26982 3.72783 4.61685 3.49967 4.39586 2.11617 2.17971 3.13585 3.29553 3.48259 6.02821 2.45395 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 16 3.14053 4.66077 5.23180 4.61819 2.61233 4.45369 4.78737 1.50018 3.44166 2.06860 3.27962 4.24628 3.45027 4.54209 4.42189 3.76459 3.20283 1.32575 5.28575 4.10929 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 17 3.38886 4.75476 5.33143 4.72504 3.26595 4.57848 4.92037 1.47279 3.59874 2.53390 3.85939 4.73032 4.93404 4.05990 4.54393 3.89329 3.62225 0.87932 5.41366 3.88193 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 18 3.22230 6.04507 4.34525 3.63114 5.47369 4.55378 4.51189 4.83019 1.50164 4.28762 5.12441 4.06245 4.90481 3.63768 0.70786 3.30502 4.03420 3.51267 4.76050 5.15549 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 19 4.15512 6.06769 4.93794 4.08310 5.45303 4.81235 4.68449 4.79094 2.74210 4.29808 5.19907 4.39973 5.15517 3.84426 0.35489 4.21115 3.39242 3.45195 6.37799 3.82002 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 20 3.21982 5.72392 3.47130 2.64073 4.42403 3.19898 3.01347 4.55555 1.30140 4.02669 4.76505 2.60590 4.38225 2.90335 1.64852 3.03386 3.44919 4.11735 6.14983 4.45423 23 - - 2.68544 4.42276 2.77570 2.73174 3.46405 2.40563 3.72545 3.29405 2.67668 2.69406 4.24740 2.90088 2.73790 3.17993 2.89698 2.37937 2.77570 2.98569 4.58528 3.61554 0.12059 2.19038 6.36249 1.67885 0.20652 0.48576 0.95510 21 3.81072 6.21941 3.70551 2.91188 5.64704 0.63622 4.55216 5.07435 2.16242 4.50024 5.30713 3.05118 4.82764 3.67372 2.62843 3.52429 4.02786 4.66892 6.56824 5.25238 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 22 3.24611 5.29562 3.91522 3.33151 4.49253 4.20118 4.38125 3.06673 2.02658 3.52517 4.38365 3.34462 4.58060 3.58769 1.15151 3.43335 3.37539 2.27044 5.81824 2.53383 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 23 3.27553 4.66285 5.15912 4.54915 3.75619 3.57529 4.76527 1.95792 4.35085 1.37383 3.78130 3.86475 4.80046 3.70645 3.86008 3.74379 2.57560 1.51235 3.34966 4.10562 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 24 3.28998 4.67895 5.15478 4.54769 2.24885 4.44705 3.52596 2.65197 4.35280 2.41067 3.03595 4.57473 4.81124 4.50062 2.20569 3.52764 3.52205 2.71898 4.79468 1.21599 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 25 3.28884 5.37706 6.22420 5.77142 4.86950 5.64623 6.43826 1.28612 5.70041 3.40979 4.63375 3.82386 5.95635 5.96344 5.84826 5.07360 4.41298 0.57138 6.85077 5.61192 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 26 3.27231 4.68881 4.99378 3.53789 3.18160 4.41279 4.73253 0.85173 3.57690 2.46724 3.80613 4.49156 4.77900 4.15267 3.14103 3.49778 3.16218 2.22535 5.30646 3.54948 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 27 3.53888 0.51587 4.94587 4.69375 5.72258 4.23754 5.58543 5.20550 4.33643 4.85462 5.68205 1.66953 5.01682 4.87504 3.35342 3.28275 4.05228 4.58778 7.00336 5.83522 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.26915 5.64015 1.45921 0.61958 0.77255 0.48576 0.95510 28 3.25975 5.67974 3.52510 2.96587 5.07500 3.99678 4.14675 4.52434 1.00551 3.99029 4.75701 2.98498 1.97697 3.25317 2.79323 2.58337 3.18883 4.10815 6.09719 4.74821 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00688 5.37788 6.10022 0.61958 0.77255 0.18904 1.75883 29 1.90380 5.64979 3.35806 2.41650 4.97253 3.97640 4.16590 3.66916 1.96764 3.12272 4.69638 3.30429 4.06367 3.15632 2.99307 2.04571 2.03857 3.07228 6.09608 4.69902 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 30 3.20341 5.70764 2.17520 2.67564 5.04930 3.97285 2.65902 3.54665 2.71292 4.01130 4.74959 1.11605 4.36890 2.92863 3.26528 3.06741 3.09705 3.82345 6.14185 4.73210 39 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 31 2.87966 5.51167 3.75788 3.21349 4.84891 3.84682 4.37564 4.26312 2.43798 3.19120 4.66552 3.52856 0.74357 3.52507 3.25973 3.03119 3.57834 3.77914 6.07291 4.75568 40 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 32 4.57511 6.57732 5.27346 4.25570 6.30297 5.04209 4.72190 5.48722 1.04312 4.75293 5.65985 3.06111 5.33765 3.84380 0.75634 3.88024 4.63588 5.18946 6.65405 5.63869 41 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 33 4.21058 5.57838 5.50359 5.02772 1.76150 5.16867 0.60121 4.08773 4.85589 3.27279 4.05467 4.30836 5.50392 4.96697 3.61267 4.48412 4.43428 3.91911 4.13666 2.90271 42 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 34 4.35799 6.53758 4.37835 3.37781 6.14486 4.80142 4.71583 5.42773 0.31788 4.74520 5.62817 2.89833 5.19432 3.84251 2.96071 4.29349 4.09458 5.08906 6.69714 5.57590 43 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 35 1.84835 5.59327 3.63231 3.08252 4.92119 3.61204 3.66643 4.35644 3.00482 3.90699 4.69578 3.60280 4.48142 0.88832 3.02305 3.29633 3.37584 3.37263 6.09419 4.74511 44 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 36 3.06664 4.84768 4.13882 3.50579 4.73799 4.35881 4.46430 4.08338 2.17471 3.34405 3.60269 3.94895 4.72855 3.65217 0.66344 3.61918 3.73798 3.15712 5.98305 4.74332 45 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 37 3.58602 6.44920 3.45870 2.90361 6.09928 4.38791 4.98908 5.59815 3.79655 5.06047 5.93016 3.96243 5.04105 0.32003 4.20346 3.23934 4.41824 5.11309 7.16253 5.74933 46 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00529 5.64015 6.36249 0.61958 0.77255 0.48576 0.95510 38 2.90749 5.34451 3.79953 3.23140 4.57082 0.83058 4.34326 3.96230 2.46272 3.39640 3.20766 3.49712 4.52980 3.52583 2.95339 3.36421 3.51943 3.18215 5.87303 4.58040 47 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00356 5.63842 * 0.61958 0.77255 0.00000 * //