HMMER3/b [3.0 | March 2010] NAME Involucrin ACC PF00904.12 DESC Involucrin repeat LENG 10 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 01:28:01 2012 NSEQ 129 EFFN 129.000000 CKSUM 1630719357 GA 30.00 0.10; TC 30.90 0.30; NC 22.00 -0.10; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -5.5528 0.75358 STATS LOCAL VITERBI -5.7579 0.75358 STATS LOCAL FORWARD -2.7051 0.75358 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 4.82772 5.66296 4.67470 1.54170 7.51094 2.68800 2.90372 5.73986 2.51753 1.94781 5.48589 4.70553 2.95415 1.26137 4.62223 5.14337 5.08540 3.26540 6.51151 5.25229 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.00000 * 1 5.75546 3.72703 7.73773 7.12314 6.20127 6.92951 7.26940 3.65546 6.90596 0.71482 3.83477 7.10017 1.10543 3.67138 6.90791 3.98022 4.21800 3.30968 7.75141 6.57945 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 2 7.16708 10.08286 3.38219 0.20400 9.29283 3.66778 7.82163 8.94010 3.84601 8.33252 9.30852 6.52930 7.83216 2.86720 7.91144 6.94035 3.98782 3.76676 10.48026 8.76649 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 3 7.26573 9.95443 6.02719 2.02837 9.32302 3.98112 2.04215 8.82880 2.72959 8.15471 9.13107 3.92898 7.90500 0.46500 6.89796 7.05394 7.54804 8.38563 10.18807 8.72640 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 4 7.52407 9.37726 8.60565 2.85492 9.20325 7.89469 3.98254 8.29258 3.58487 3.86175 8.44785 7.37851 8.14855 0.18338 3.26562 7.47101 7.50975 8.03467 9.36972 8.42712 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 5 5.61985 8.10726 3.42461 0.57849 7.45387 3.84813 6.55606 6.92931 3.13913 3.02207 4.09752 5.84270 6.77215 2.18985 3.89919 5.58238 5.84870 2.07183 8.53017 7.13421 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 6 3.06355 8.62349 6.61924 3.13012 8.08629 0.58519 6.94917 7.47714 1.86212 3.62377 7.67439 6.42951 3.74036 2.29668 3.79781 6.22847 6.45183 7.08497 4.30511 7.65599 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 7 7.41016 9.60426 6.73773 3.32064 9.26568 7.54064 3.05766 8.51208 2.51207 7.76034 8.71317 6.99492 3.15705 0.24241 5.97600 7.27167 7.53850 8.19022 9.66796 8.56015 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 8 6.62776 8.52782 6.50749 2.99720 7.92626 7.12580 8.03924 7.25202 7.13291 0.47439 7.83137 6.99210 2.27482 1.98146 7.48929 3.62110 7.03796 2.97045 9.50546 8.27057 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 9 7.27214 10.00001 5.99527 0.81558 9.34957 3.23212 7.78227 8.87853 0.89638 8.20919 9.19437 3.53103 7.90547 2.61019 7.01984 7.05395 7.56660 8.42281 10.25490 8.75637 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00032 8.44899 9.17133 0.61958 0.77255 0.48576 0.95510 10 3.83324 4.64042 4.07556 5.97013 6.43947 4.17334 1.05348 5.79877 5.92005 1.52794 6.41178 3.44034 3.99502 2.49877 4.51981 5.85416 3.86870 1.94502 7.89270 3.02702 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00021 8.44888 * 0.61958 0.77255 0.00000 * //