HMMER3/b [3.0 | March 2010] NAME Clathrin_propel ACC PF01394.15 DESC Clathrin propeller repeat LENG 37 ALPH amino RF no CS yes MAP yes DATE Thu Oct 11 22:10:22 2012 NSEQ 71 EFFN 71.000000 CKSUM 1146040450 GA 21.30 21.30; TC 21.90 21.30; NC 20.90 21.20; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.3495 0.73432 STATS LOCAL VITERBI -7.8216 0.73432 STATS LOCAL FORWARD -3.2964 0.73432 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.72467 3.98845 3.02263 3.00777 3.16565 2.83132 3.92054 2.41269 2.93704 2.56380 3.69379 2.68089 3.25536 3.11549 3.34622 2.62740 2.73250 2.46703 4.11075 3.60477 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.00000 * 1 2.07708 4.36388 2.74736 3.19858 6.76382 1.79152 2.89488 6.24491 4.63326 1.79838 6.46821 1.83942 2.70357 3.09680 5.12489 3.87334 3.58246 4.16595 7.86259 4.29797 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 2 1.76180 6.96953 5.57584 5.01486 6.15134 5.89176 6.11447 2.13119 3.75185 4.01746 4.14959 2.30244 2.00429 2.52195 2.33703 3.03398 2.54642 2.37337 7.51435 6.23061 2 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 3 2.75516 3.59190 3.62820 2.82054 2.73568 2.66369 6.10193 2.10140 4.97354 2.69776 2.62242 1.69973 4.24890 4.01285 3.11343 2.59825 2.88737 3.70517 7.52929 6.24075 3 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 4 2.71269 3.72239 6.23244 5.65707 1.79343 6.11991 6.39996 2.70192 5.58052 4.85735 5.76611 1.94619 2.60849 3.09174 2.21926 1.87665 2.35435 3.49643 7.25547 6.04647 4 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.07290 7.85709 2.66045 0.61958 0.77255 0.48576 0.95510 5 1.84551 7.37697 3.43756 2.16275 6.72346 2.79511 5.82318 6.21042 2.70501 5.68286 6.41727 3.07467 2.87886 1.50565 2.79251 2.15768 3.32008 4.15193 7.80881 6.39701 5 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00062 7.78481 8.50716 0.61958 0.77255 0.09101 2.44199 6 2.81932 7.42909 1.98780 2.77386 3.65286 5.70703 3.56045 1.65823 4.63144 5.73208 6.47116 2.53541 2.48202 2.32099 4.03112 3.00821 2.30130 3.44055 7.86501 4.07460 6 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 7 5.12356 6.49878 4.30759 6.46956 2.28701 3.14588 6.62600 1.15478 6.25494 2.52508 2.61316 2.21265 3.90091 6.38661 4.16598 3.06818 2.80941 2.41628 7.12050 4.04236 7 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 8 4.93053 7.43569 1.97629 3.81996 6.77844 2.97119 5.89246 2.11341 2.03142 4.18992 6.47695 1.86329 6.09858 3.77750 3.90208 2.68233 2.10250 2.44716 7.86976 3.50947 8 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 9 2.32027 6.49853 7.10534 6.48898 0.84023 4.09440 6.63149 4.10113 6.27035 3.74002 3.56351 6.46465 2.68017 6.39853 6.27299 5.60909 4.04205 2.74283 7.12054 1.52468 9 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 10 3.89972 3.84216 2.25459 2.27103 6.76021 5.70873 5.89663 3.98895 2.69404 3.82591 6.46602 3.68108 1.89737 4.99560 2.22076 2.52962 2.38142 2.77193 2.23677 6.45476 10 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 11 2.54339 2.21242 3.45110 3.16499 6.75120 2.08557 5.89994 4.20160 2.39091 5.71788 6.46101 3.15304 6.10470 4.99999 5.13006 1.89060 1.64557 2.35312 7.85684 6.45275 11 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.18558 7.85709 1.77793 0.61958 0.77255 0.48576 0.95510 12 1.19443 2.60654 2.15653 5.98763 5.95838 6.03097 6.64356 5.30740 5.90247 2.83256 5.95756 1.95485 6.54224 6.13670 6.12439 2.36220 2.82296 2.07030 7.44760 6.25420 12 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.67221 8.39456 0.61958 0.77255 2.71440 0.06854 13 2.43170 7.09854 3.10566 2.57709 4.59088 3.90024 5.78493 1.96651 2.50618 2.70572 2.72694 5.09153 1.95080 3.47278 5.03326 3.82929 1.75055 5.44994 7.57681 4.06238 13 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.67221 8.39456 0.61958 0.77255 2.71440 0.06854 14 3.48942 7.26225 2.66481 2.37328 3.97965 5.53639 2.61728 3.42054 3.43100 2.70696 1.80222 1.94204 5.92977 2.50870 3.71362 3.70910 2.50881 5.65073 7.69734 2.95707 14 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.67221 8.39456 0.61958 0.77255 2.71440 0.06854 15 4.76029 7.26992 3.74938 1.27801 6.61456 4.08216 2.47807 3.50336 2.70957 3.49787 3.34081 2.38896 2.43304 2.76831 4.94891 3.47861 3.17968 2.30193 7.70286 6.29216 15 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.67221 8.39456 0.61958 0.77255 2.71440 0.06854 16 3.08669 7.27378 3.24318 3.61873 6.62018 3.94494 3.98552 6.10709 1.69330 5.57963 6.31409 3.22652 1.97714 3.74116 4.94742 0.97622 3.36815 3.79391 4.40016 6.29391 16 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.67221 8.39456 0.61958 0.77255 0.04231 3.18373 17 3.66322 7.44152 2.22059 2.91306 6.78703 3.91701 4.19158 3.94840 3.10764 5.74699 4.20983 2.84178 2.38567 3.45758 5.11788 2.89469 1.99633 3.49971 1.26597 6.46273 17 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 18 3.25933 3.53983 3.47154 3.25600 3.59275 2.85334 4.05529 2.41695 1.90357 1.60317 4.37682 2.92204 6.12115 3.86028 2.24772 3.27081 3.42394 2.93567 7.81308 6.42552 18 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 19 3.12592 6.64281 4.22470 5.69310 1.99358 2.01577 3.14664 2.94542 2.82594 3.05507 4.02169 3.43157 3.20906 3.76001 5.87765 2.30572 3.53470 2.23277 3.88206 2.38600 19 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 20 2.99272 2.32239 3.36760 3.37734 3.80337 3.85620 6.49937 1.48562 3.39237 1.56895 5.69235 3.13160 3.68870 6.06485 6.02763 3.82158 3.94527 1.90545 7.18852 5.99604 20 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 21 3.95540 2.14219 4.09864 6.48008 2.37483 6.29416 6.62813 1.45073 3.81512 1.78030 3.84976 2.43086 6.65778 6.39261 4.22033 4.13747 3.18479 2.14146 7.11946 3.83688 21 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 22 1.26663 3.32368 7.12331 6.50879 5.61103 1.53851 6.65398 1.98436 6.29098 2.70837 4.21025 6.48332 6.67776 6.41970 6.29420 3.09087 2.40908 2.35943 7.14343 5.96766 22 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 23 5.13146 6.50346 7.11116 6.49491 4.23618 6.30326 6.63793 1.24730 6.27643 1.84726 2.90990 6.47083 6.66635 6.40448 2.13689 2.94123 3.07020 1.71228 7.12649 2.68254 23 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 24 2.31443 2.98889 2.98390 2.54572 6.77401 2.97925 4.26824 3.92293 2.05156 2.41222 4.43097 1.92981 6.09938 4.99097 2.18932 2.39132 5.16200 3.20387 7.86758 6.45888 24 - E 2.68516 4.43275 2.77560 2.73224 3.46973 2.40530 3.72461 3.29578 2.67739 2.70253 4.24986 2.90627 2.72745 3.15468 2.89582 2.38047 2.77453 2.98851 4.59527 3.62553 0.91225 0.87891 1.69748 1.26158 0.33297 0.48576 0.95510 25 3.88991 6.95355 5.20407 3.40265 6.18300 1.84498 5.82847 2.43454 2.78525 1.79825 3.25446 2.46370 3.07513 2.33118 5.09778 3.07412 2.53642 2.80465 7.46237 6.13436 32 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.07097 7.65503 2.68765 0.61958 0.77255 1.97510 0.14937 26 1.93647 7.09568 2.67189 4.45900 6.39121 5.50756 5.70065 4.01976 3.37030 2.42416 3.36595 3.76350 3.39913 2.49990 2.22060 2.85331 1.84003 2.09174 7.55921 6.18029 33 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00074 7.60519 8.32754 0.61958 0.77255 0.11955 2.18323 27 3.36879 4.11477 3.20668 3.92560 6.73176 3.11970 5.88077 2.31262 2.09172 5.69844 6.44162 2.35614 4.37392 4.98082 2.54223 2.61103 1.87157 1.96274 2.97446 6.43344 34 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02072 7.83735 3.90657 0.61958 0.77255 1.15858 0.37678 28 2.34398 7.40612 2.56049 3.18052 6.75230 2.16873 5.85319 4.34141 1.69776 3.61661 6.44649 2.65216 6.05975 2.26612 2.86961 3.57256 2.58064 2.82981 7.83814 3.09693 35 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00060 7.81723 8.53958 0.61958 0.77255 0.61683 0.77578 29 2.98570 7.42623 3.85382 4.60591 6.77227 0.75709 5.87443 3.57346 3.66216 5.73206 6.46705 2.29230 3.80725 3.38330 3.26831 2.87163 2.04491 5.81748 7.85871 6.44733 36 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00059 7.83737 8.55972 0.61958 0.77255 1.15806 0.37701 30 2.54246 7.41822 5.16276 3.50983 3.00981 5.68669 4.00248 4.09179 1.91688 4.14421 6.45939 2.38297 2.93836 1.86206 2.72347 1.93652 3.37565 4.14708 7.85207 2.62951 37 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00059 7.83737 8.55972 0.61958 0.77255 0.21870 1.62740 31 3.77036 6.72973 7.37924 6.77633 5.83224 6.59698 3.67613 2.12372 6.57104 1.34705 1.92981 6.76578 6.94422 6.70160 6.58119 3.51729 5.61613 0.97382 7.42559 6.25222 38 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 32 3.86757 6.50276 7.04851 3.66044 2.66323 6.28747 1.86772 3.09161 6.22887 2.14119 5.62151 6.43756 6.65153 1.20169 6.25026 3.90560 3.45966 2.27929 7.12393 2.34163 39 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 33 3.95569 6.49753 7.10447 6.48802 4.02178 2.94339 2.02980 1.34345 6.26932 1.23312 4.28749 6.46365 6.65961 6.39750 6.27190 2.98010 5.35725 2.08092 7.11960 3.93461 40 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 34 3.69712 6.51441 7.12229 6.50690 1.59311 2.94323 6.64570 1.78927 6.28860 3.72587 3.36888 6.48197 6.67784 6.41597 6.29102 5.62758 5.37537 1.62704 2.21065 1.79558 41 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 35 5.80582 4.11923 1.27338 1.94177 7.75194 6.21615 6.66117 7.28144 2.88455 6.73469 7.52660 2.33759 6.77954 5.79774 6.16094 1.14084 2.64314 6.81779 8.86700 7.36811 42 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 36 3.92816 3.49091 7.19988 6.58876 5.68560 6.40128 6.74530 1.55809 2.95206 1.40652 2.86955 6.56893 3.79230 6.50673 6.38146 5.71643 3.68907 1.14408 7.23124 6.05420 43 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 37 3.33363 7.47048 1.73108 1.02771 3.14051 2.30896 5.91291 6.30375 3.17077 3.53030 6.51147 2.30421 6.11769 3.12869 5.14500 3.05836 5.18658 5.86156 7.90226 6.48903 44 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00039 7.85691 * 0.61958 0.77255 0.00000 * //