HMMER3/b [3.0 | March 2010] NAME NHL ACC PF01436.16 DESC NHL repeat LENG 28 ALPH amino RF no CS yes MAP yes DATE Sun Oct 7 12:11:53 2012 NSEQ 108 EFFN 108.000000 CKSUM 3878027597 GA 20.00 20.00; TC 20.00 20.00; NC 19.90 19.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.9349 0.72988 STATS LOCAL VITERBI -7.2357 0.72988 STATS LOCAL FORWARD -3.7323 0.72988 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.75165 3.62201 2.61203 3.40169 2.96711 2.61941 3.19605 2.89600 3.35600 2.41507 4.59516 2.73560 3.22419 3.43783 3.04250 2.93370 3.09306 2.11420 4.38775 3.45045 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.00000 * 1 5.64456 7.01135 7.62279 7.00742 0.97002 6.81992 7.14630 4.28686 6.79029 0.90397 4.38265 4.15943 7.17253 6.90686 3.98441 6.13375 2.30290 4.32735 7.61344 3.53814 1 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 2 2.84088 2.22566 2.86493 3.95767 3.22281 2.97534 4.41838 4.59590 3.24704 2.68664 4.47516 2.07321 4.14948 2.78384 2.21233 2.63254 2.93776 4.10386 3.70884 3.04842 2 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 3 3.96571 3.33661 2.91251 2.83221 2.69781 2.99128 2.85256 3.54331 3.21383 2.90660 3.33477 2.32581 6.50122 2.51402 2.39375 2.50847 3.68909 3.56922 4.55448 2.51244 3 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 4 2.72376 3.90856 8.85921 8.68561 7.82242 7.23927 9.22450 3.90636 8.56858 3.92624 7.55325 8.09291 0.15572 8.65897 8.55663 6.74102 6.81652 4.32195 9.85605 8.75483 4 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 5 2.61535 7.82725 4.24709 2.72615 7.17092 3.18145 1.35859 3.49590 4.07750 2.77710 6.86828 3.04509 6.48766 2.72966 3.00481 2.41031 2.54783 3.10755 2.93174 4.97916 5 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 6 3.49674 3.72451 1.66588 5.32987 3.93862 0.61366 6.58401 6.88155 2.87073 6.38019 7.12332 5.84517 4.49709 5.69190 3.77827 2.63589 4.21752 6.41151 8.51821 7.13080 6 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 7 3.65179 7.92617 8.85640 8.36224 3.88552 8.31668 8.93582 1.53542 8.28445 1.18183 4.02236 8.49011 8.49805 8.42582 8.36940 7.73508 3.15778 0.99993 9.15898 8.02085 7 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 8 0.80743 2.17972 3.35134 4.21555 6.82047 4.08127 6.38344 4.33486 4.06905 4.41511 6.64526 5.70633 6.57105 4.27216 3.08008 2.88938 2.28948 2.44616 8.07478 3.94424 8 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 9 2.77180 4.57546 7.50049 6.88400 3.53559 6.69194 7.02629 2.08044 6.66525 2.14761 3.37493 6.85954 7.05549 4.59814 4.68018 3.28935 3.89731 0.76558 4.63894 2.75514 9 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06495 8.27255 2.77048 0.61958 0.77255 0.48576 0.95510 10 2.99939 3.64041 1.11760 4.25489 2.92263 2.74879 3.94183 3.68967 6.21953 2.59445 3.83832 2.13659 6.91179 6.43340 6.38793 2.37773 2.94791 2.94898 7.51377 6.32344 10 - - 2.68357 4.42635 2.77766 2.72813 3.46764 2.40923 3.71774 3.29764 2.68151 2.69765 4.25100 2.90756 2.72029 3.18556 2.89651 2.38180 2.76341 2.98928 4.58887 3.61913 0.48681 1.02313 3.65153 0.11637 2.20860 0.07054 2.68666 11 2.68652 4.18822 2.15859 2.78222 7.15626 3.54193 3.97322 4.68351 2.44134 4.04789 6.85013 2.27016 2.44624 2.98793 3.15266 1.79957 2.50347 3.76775 3.83683 6.82993 13 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00039 8.24805 8.97040 0.61958 0.77255 0.14780 1.98487 12 2.43856 3.24811 1.76721 3.41219 7.17960 2.20333 4.25334 6.66655 2.70181 2.88124 4.01073 2.03919 6.48601 2.74005 3.26866 2.25983 2.81030 6.22452 8.26499 6.85321 14 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 13 5.58375 8.10663 2.30241 3.92720 7.45334 0.55227 3.65393 6.94097 3.97236 3.00706 7.15370 2.11716 6.70844 3.64804 3.33099 5.53392 5.81807 4.36102 8.52749 7.11249 15 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 14 3.24295 7.83287 2.06730 2.36900 4.40229 3.16038 2.43411 4.54565 3.20564 2.49072 6.87320 2.24281 6.48609 2.46613 2.35819 2.44750 2.85216 3.49469 8.26480 6.85309 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 15 4.20682 8.07351 9.05390 8.58352 2.51852 8.58537 9.23022 1.30180 8.54059 1.33963 6.78536 8.75708 8.68960 8.63188 8.62546 8.03992 7.15853 1.06970 9.29645 3.75800 17 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 16 3.33838 3.03072 7.50247 6.88615 2.60175 4.14260 7.02760 2.26075 6.66743 2.06169 6.01448 3.17496 7.05757 6.79549 6.66992 6.00607 5.75527 1.99219 2.68299 1.09936 18 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 17 4.22260 7.99363 9.09104 8.70644 7.63999 8.74880 9.97742 1.84163 8.76396 2.42989 7.26424 8.92435 8.88669 9.15333 9.04909 8.27736 3.14815 0.36716 10.09453 8.76871 19 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 18 0.98346 3.10723 7.51913 3.17376 6.07057 2.26452 7.09308 3.63417 6.70790 2.91817 6.09598 6.89119 7.08850 6.84214 6.72307 2.64380 1.54572 2.85694 7.59938 6.42387 20 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 19 7.03071 3.92282 0.24796 2.13998 9.21138 6.93834 7.70937 8.88272 7.06692 8.27285 4.34389 3.13192 7.69036 6.91679 7.94566 3.96133 7.39248 8.33473 10.42680 8.67877 21 - E 2.68630 4.42631 2.77925 2.72951 3.46760 2.40119 3.71401 3.29039 2.68146 2.69761 4.25095 2.90444 2.74145 3.17449 2.88607 2.38076 2.77375 2.98924 4.58883 3.61909 0.28847 1.43508 4.38234 0.45233 1.01100 0.48576 0.95510 20 3.27548 3.55948 5.81026 3.11930 2.95053 2.96240 3.65779 6.09817 3.30152 2.76565 6.55430 2.35223 6.59564 5.58620 2.20951 1.65499 2.24493 2.53357 5.20334 2.79028 24 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.26011 8.98245 0.61958 0.77255 0.22361 1.60756 21 3.07514 3.08205 3.16004 1.70009 4.98871 1.88626 2.82178 6.66483 3.04511 6.13787 4.00639 1.69763 3.85700 5.37579 3.22176 3.13840 3.93184 4.81525 4.71367 2.70474 25 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 22 3.13515 7.81870 3.61422 5.01896 7.15835 4.00140 2.40073 6.64051 3.50624 3.55942 4.77327 0.82341 2.69385 5.38244 2.53465 2.82767 2.90294 3.83162 8.25464 4.00479 26 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 23 3.22257 4.53479 4.55875 5.02235 3.40969 2.67603 0.93525 6.62960 3.30847 3.43581 4.19191 2.05137 6.49182 3.23293 2.89567 2.26005 4.29417 6.19879 8.25025 4.86574 27 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 24 3.09847 2.61643 5.62401 3.38261 4.67214 6.12229 3.16212 6.49781 2.86301 3.02764 4.27465 3.99219 6.51468 2.22701 0.96195 2.75182 3.07248 3.20101 4.88791 6.81051 28 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 25 7.11647 8.23613 9.28594 2.84424 4.62381 8.91926 9.69814 1.29713 8.84518 1.72254 3.93322 9.10383 8.89643 8.84700 8.92112 8.43483 7.35865 0.78234 9.50016 8.50026 29 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 26 3.02298 4.48118 6.95861 4.54511 2.62231 3.16918 3.88074 3.16953 2.31659 2.62100 4.59143 6.57843 6.96629 1.58096 2.85468 3.40186 3.43523 2.10515 2.16348 6.38991 30 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 27 3.31305 2.64867 3.95376 4.13316 6.93474 3.16159 3.72574 2.21652 1.38464 4.17046 6.72108 5.65128 6.53979 2.88619 3.23988 4.44264 4.11822 1.28475 4.78650 6.77545 31 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00038 8.27255 8.99490 0.61958 0.77255 0.48576 0.95510 28 4.44251 4.47778 7.50490 6.88845 0.72319 6.69653 7.03074 2.84104 6.66977 1.53579 4.22394 6.86413 4.28106 6.79758 6.67217 6.00854 4.04199 3.49342 4.40620 2.13240 32 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00026 8.27243 * 0.61958 0.77255 0.00000 * //