HMMER3/b [3.0 | March 2010] NAME Bombesin ACC PF02044.12 DESC Bombesin-like peptide LENG 14 ALPH amino RF no CS yes MAP yes DATE Thu Oct 4 18:13:30 2012 NSEQ 12 EFFN 12.000000 CKSUM 2087235631 GA 18.10 18.10; TC 19.60 18.40; NC 16.80 16.60; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -5.8698 0.72349 STATS LOCAL VITERBI -5.7978 0.72349 STATS LOCAL FORWARD -4.4080 0.72349 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.59506 6.75236 5.72947 5.50884 3.41339 1.67787 2.63781 4.44085 2.04659 2.84930 2.63580 3.38238 4.56947 3.18574 3.60647 2.35124 4.63359 2.74517 2.64638 6.10797 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.00000 * 1 4.24515 6.12253 5.94138 5.58485 6.48928 0.50458 6.18296 5.75433 4.64627 5.51218 6.40060 5.45528 5.68604 5.45459 1.66890 4.44632 4.75985 2.05020 7.62514 6.57015 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 2 4.24894 6.55525 3.94946 3.85752 6.40598 4.69535 5.41273 5.93776 4.32498 5.42204 6.23172 0.80851 2.12366 1.72500 4.81295 1.98221 4.62403 5.36756 7.53822 6.11045 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 3 4.98305 6.72836 5.18431 4.80402 4.81841 5.51015 1.40352 5.09769 3.96912 1.32666 5.51916 5.13647 5.92914 0.98431 4.13978 5.05031 5.17819 5.08293 6.37941 4.85133 3 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 4 7.40485 7.91290 7.43073 7.51278 6.76758 6.53207 7.65605 8.10975 7.63032 7.14149 8.54442 7.74170 7.15453 7.90111 7.39470 7.73775 7.77821 7.87873 0.01162 6.76657 4 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 5 0.03189 6.66539 6.79445 6.86347 7.30424 5.41506 7.43936 7.03036 6.92368 6.62304 7.53484 6.40360 6.24491 7.05563 6.81601 5.12246 5.48503 6.17994 8.23187 7.58895 5 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 6 4.77218 5.94010 6.99149 6.60050 5.56031 6.51419 7.68162 2.06818 6.61989 3.89769 5.21311 6.75640 6.73959 6.97004 6.85833 6.01841 2.49327 0.30624 7.89838 6.60074 6 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 7 6.51103 7.66043 7.20209 7.29004 7.93746 0.01140 7.92865 8.19824 7.53073 7.39286 8.60705 7.43656 6.97558 7.78352 7.34548 6.78541 7.03034 7.59004 8.34720 8.16932 7 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 8 4.54283 6.44056 5.31659 5.34638 5.88537 5.08067 0.29981 6.58069 5.54914 6.04553 6.98309 5.48694 5.88933 5.89837 5.74051 1.64001 5.09154 5.80586 7.33802 5.84231 8 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 9 5.87975 6.89615 7.51429 7.14286 0.82728 7.09120 6.43916 4.09476 7.02765 0.69735 4.47583 7.07411 6.93407 6.52898 6.76614 6.66056 6.04451 4.54734 6.32298 4.84265 9 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 10 6.41991 7.55260 7.24577 7.26501 6.60651 6.32731 7.69342 6.29347 7.25150 5.32052 0.02272 7.39245 6.96745 7.52746 7.11643 6.76911 6.86956 6.41558 7.97362 7.15206 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 11 6.51103 7.66043 7.20209 7.29004 7.93746 0.01140 7.92865 8.19824 7.53073 7.39286 8.60705 7.43656 6.97558 7.78352 7.34548 6.78541 7.03034 7.59004 8.34720 8.16932 11 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 12 6.57724 7.74101 6.83593 6.45719 7.69704 6.28342 6.97461 7.61787 0.02230 6.80133 7.90821 6.73374 6.84749 6.30160 5.41948 6.70230 6.81693 7.27746 8.09607 7.55931 12 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 13 5.33936 7.16843 6.44991 5.04549 6.99754 5.69776 5.28877 6.12688 0.24587 5.34486 6.28680 5.22338 5.96835 4.41599 1.89113 5.29643 5.33977 5.86328 7.19089 6.25640 13 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00322 6.13491 6.85726 0.61958 0.77255 0.48576 0.95510 14 4.82345 6.61874 6.52334 6.59419 7.16812 5.35390 7.31310 7.07931 6.76406 6.62470 7.50169 6.26307 6.18697 6.89970 6.71579 0.03657 5.41341 6.16373 8.16965 7.37541 14 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00217 6.13386 * 0.61958 0.77255 0.00000 * //