HMMER3/b [3.0 | March 2010] NAME Extensin_1 ACC PF02095.10 DESC Extensin-like protein repeat LENG 10 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 13:30:49 2012 NSEQ 28 EFFN 28.000000 CKSUM 3644041128 GA 15.00 0.20; TC 15.20 0.20; NC 14.60 0.10; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -5.4756 0.73981 STATS LOCAL VITERBI -5.4877 0.73981 STATS LOCAL FORWARD -3.4946 0.73981 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 4.76715 7.30412 5.73364 2.31993 5.19260 4.82618 3.02066 3.56480 1.79751 4.03260 6.77384 4.46151 1.04892 4.52820 5.51478 4.53963 4.06907 2.01809 7.75081 2.57336 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.00000 * 1 7.33957 8.50963 7.69795 7.76728 8.17705 7.09941 2.51221 8.91806 7.99189 8.08685 9.31291 8.01874 0.09131 8.31784 7.93740 7.56901 7.83170 8.37032 8.98008 8.23176 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 2 5.03389 6.96401 6.17513 6.21276 7.70691 5.64410 7.36923 7.33227 6.35305 6.91749 7.71745 6.21264 0.14795 3.04890 6.51238 5.21980 2.82979 6.39904 8.87551 7.83128 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 3 2.90268 6.31618 7.10583 2.49098 5.64597 6.46571 6.98168 2.67720 6.43999 2.40225 5.50728 6.63084 6.76659 6.63547 6.51908 5.83258 2.83903 0.47890 7.42236 6.21729 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 4 6.23786 8.19336 5.11013 3.18560 4.99011 6.22909 1.34942 7.01486 6.04445 6.14401 7.45291 3.23803 6.86607 6.07798 6.48381 6.00704 6.53743 6.81513 6.64812 0.46871 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 5 5.62136 7.58774 6.09956 5.53633 7.63616 2.80742 2.84986 6.89698 0.22248 6.18356 7.09878 5.80009 6.55483 5.29071 4.40340 5.64777 3.25431 6.48273 8.07548 7.05541 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 6 8.06441 8.73520 8.25923 8.35042 8.90608 7.32307 8.89304 9.31652 8.55070 8.37694 9.71521 8.64098 0.00382 8.85356 8.30529 8.42663 8.50542 8.88881 9.20728 9.14627 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 7 5.10677 7.08882 5.35059 5.22562 6.67050 5.64570 3.41533 6.43308 5.00888 2.71402 6.87495 5.58755 0.31479 3.20054 5.24087 2.50419 5.51878 5.97607 7.94687 6.59700 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 8 5.64755 6.78527 7.73378 7.36270 3.21316 7.32781 7.43634 1.57183 7.34382 4.61397 5.94842 7.38079 7.49659 7.51933 7.48180 6.80370 5.90738 0.40705 7.54421 2.81823 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 9 5.66009 7.96460 4.82900 0.22257 6.53934 5.83326 6.16344 6.75394 3.13224 6.19639 7.18344 5.31761 6.44003 5.40980 5.11164 5.54076 5.91656 3.29069 7.84808 2.62530 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00143 6.94432 7.66666 0.61958 0.77255 0.48576 0.95510 10 5.85000 8.13042 5.09641 3.07394 7.72467 5.98233 2.94538 7.03286 0.22142 6.30225 7.24631 2.82631 6.51083 5.25950 4.60025 5.70614 6.01066 6.68854 8.22935 7.06418 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00097 6.94385 * 0.61958 0.77255 0.00000 * //