HMMER3/b [3.0 | March 2010] NAME HS1_rep ACC PF02218.10 DESC Repeat in HS1/Cortactin LENG 37 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 06:39:38 2012 NSEQ 18 EFFN 2.008301 CKSUM 4110222166 GA 21.00 21.00; TC 21.50 22.00; NC 20.80 20.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.0817 0.71956 STATS LOCAL VITERBI -7.5742 0.71956 STATS LOCAL FORWARD -4.0726 0.71956 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.63748 4.93797 2.39718 2.77412 3.02471 1.96389 3.24583 3.71248 2.44530 3.34744 4.33507 3.57016 4.22123 2.88376 3.13363 2.49318 3.30132 2.83987 4.74310 2.96119 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.00000 * 1 3.84642 5.48444 4.66043 4.67228 5.68533 0.15092 5.67573 5.53284 4.94577 5.05507 6.07930 4.82831 4.88605 5.21182 5.03936 4.04769 4.37836 4.91781 6.52099 5.83235 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 2 4.60828 5.58583 5.46928 5.37293 0.60002 5.13120 3.84047 4.16299 5.16165 3.33131 4.69932 4.70084 5.39627 4.85940 4.99227 4.54478 4.81016 4.12854 3.91964 1.37752 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 3 3.84642 5.48444 4.66043 4.67228 5.68533 0.15092 5.67573 5.53284 4.94577 5.05507 6.07930 4.82831 4.88605 5.21182 5.03936 4.04769 4.37836 4.91781 6.52099 5.83235 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 4 3.84642 5.48444 4.66043 4.67228 5.68533 0.15092 5.67573 5.53284 4.94577 5.05507 6.07930 4.82831 4.88605 5.21182 5.03936 4.04769 4.37836 4.91781 6.52099 5.83235 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 5 3.64929 5.69676 4.20144 3.35990 5.30337 4.16986 3.96572 4.58075 0.65909 3.91509 4.80918 3.68952 4.50140 3.09308 1.77650 3.62194 3.75980 4.27021 5.85880 4.78523 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 6 4.53706 5.55545 5.37642 5.22122 0.78156 5.08582 2.43693 4.21973 5.02252 3.42744 4.74883 4.63919 5.35244 4.78231 4.90786 4.47451 4.73439 4.14022 3.90161 1.29027 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 7 3.84642 5.48444 4.66043 4.67228 5.68533 0.15092 5.67573 5.53284 4.94577 5.05507 6.07930 4.82831 4.88605 5.21182 5.03936 4.04769 4.37836 4.91781 6.52099 5.83235 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 8 3.51278 4.76365 5.47560 5.03784 4.08295 4.98336 5.78639 1.74936 4.94145 2.52919 3.84815 5.18753 5.29227 5.22289 5.11745 4.43128 3.79443 0.55089 6.17165 4.93281 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 9 3.16184 5.74829 2.27630 1.56064 5.05308 3.56328 4.00036 4.56938 2.90224 4.03609 4.84244 3.01565 4.12686 1.22341 3.44525 3.06131 3.42718 4.12767 6.17291 4.69333 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 10 2.61598 5.19898 3.03059 2.34109 4.52373 3.53487 3.71691 3.98931 1.83142 3.49180 3.68100 3.01282 3.92671 2.42408 2.49566 2.28412 2.39920 3.57905 5.64074 4.25177 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 11 3.42551 6.14513 0.72281 1.99248 5.40441 3.57020 4.17477 4.97435 3.27410 4.42018 5.29703 3.01096 4.23405 2.67634 3.93156 3.26333 3.72766 4.50794 6.56575 4.98418 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 12 3.34227 5.49877 3.78884 3.09354 5.02414 3.96739 3.91050 4.35984 1.76833 3.77147 4.62404 3.49581 4.33465 3.03664 0.92994 2.47471 3.51238 4.01705 5.79393 4.62947 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 13 2.56261 4.43035 3.69915 3.12721 3.55858 3.74540 4.00022 2.91403 2.79969 2.62972 2.18574 3.51115 4.12292 2.10063 3.37304 2.99786 2.98230 2.12131 3.62599 3.78913 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 14 4.01523 6.06730 0.26002 3.13438 5.59734 3.98623 4.85350 5.40535 4.10846 4.88193 5.93279 3.70977 4.68722 4.13116 4.68087 3.93011 4.38466 4.97776 6.57962 5.42054 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 15 2.39575 5.19949 3.10889 2.59018 4.57905 3.58933 3.79963 4.02171 1.24857 3.53529 4.31607 3.11003 3.44102 2.69965 2.87685 2.44003 3.08603 3.62678 5.68516 4.33452 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 16 2.11560 3.03406 4.47575 4.16844 4.79494 3.28003 4.95490 4.17371 4.08803 3.92225 4.74185 3.95558 4.09270 4.31389 4.27736 0.60788 3.07509 3.55810 6.17823 5.04105 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 17 0.32222 4.76834 4.43431 4.33367 5.00944 3.56237 5.23065 4.27522 4.37603 4.10986 5.09263 4.22891 4.37256 4.64398 4.52148 3.13255 3.46334 3.77284 6.33727 5.26241 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 18 3.51049 4.78725 5.37400 4.91206 3.87099 4.89266 5.54087 2.04688 4.76977 1.84499 3.68064 5.06794 5.19587 5.01419 4.91478 4.32304 3.78401 0.64803 5.91190 4.70104 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 19 3.84642 5.48444 4.66043 4.67228 5.68533 0.15092 5.67573 5.53284 4.94577 5.05507 6.07930 4.82831 4.88605 5.21182 5.03936 4.04769 4.37836 4.91781 6.52099 5.83235 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 20 4.47269 5.50751 5.39427 5.22355 0.99566 5.06270 1.85024 4.16140 5.02331 3.40359 4.70176 4.63572 5.32978 4.77595 4.90136 4.44502 4.67123 4.07159 1.89485 1.84397 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 21 3.51144 6.24326 0.75435 1.54980 5.51013 3.58786 4.24250 5.10347 3.40761 4.54771 5.45563 3.03599 4.27612 3.42742 4.10841 3.33490 3.82792 4.62806 6.67599 5.07875 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 22 4.27034 5.54155 4.74755 4.50907 2.35693 4.80511 1.95729 4.23984 4.28220 3.47822 4.75504 4.39797 5.15306 4.44743 4.38622 4.23219 4.49221 4.12513 4.02524 0.60036 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 23 2.79104 5.16661 3.07711 2.11051 4.47441 3.56873 3.74583 3.47306 1.94972 3.44492 4.22183 3.05768 3.96157 1.75344 2.89894 2.77732 3.01851 2.82593 5.61407 4.24863 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 24 2.21063 5.13744 2.91180 1.66627 4.72911 1.54746 4.02250 4.19179 2.88255 3.74398 4.53855 3.14830 4.05167 3.17134 3.37302 2.50855 3.18647 3.74401 5.92760 4.54699 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 25 2.90478 5.34057 3.06081 2.01050 4.70511 3.03966 3.78263 4.15807 1.28752 3.62926 4.39975 3.09038 4.02315 2.89228 2.59218 2.61934 3.12839 3.74682 5.74384 4.38348 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 26 3.07832 4.51155 4.66438 4.11876 3.60311 4.23018 4.70049 2.33736 3.98515 1.46570 3.49911 4.30597 4.61306 4.21767 4.16066 3.56881 1.71248 1.57493 5.32119 4.14501 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 27 2.45825 5.38154 2.56278 1.40751 4.71148 3.14321 3.79921 4.20115 2.59085 3.68274 4.43900 2.71740 3.97723 2.61220 3.10200 2.30042 3.10618 3.76658 5.82138 4.39384 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 28 3.32252 5.47763 3.68703 3.04406 4.86788 3.95519 3.90779 4.23751 0.78758 2.96917 4.55255 3.46527 4.32116 2.57494 2.43336 3.31147 3.49121 3.92425 5.74971 4.55154 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 29 3.42634 5.35027 3.54044 3.34922 4.25549 3.89922 0.54370 4.47063 3.28402 3.97763 4.93872 3.76992 3.06762 3.78867 3.56892 3.49619 3.77451 4.11055 5.63811 4.18873 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 30 1.82387 3.69038 3.12010 1.71995 4.33813 3.52928 3.81573 3.76931 2.60554 3.34969 4.14531 2.75103 3.96132 2.95422 3.07401 2.50475 2.75874 3.40367 5.56602 4.21735 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 31 2.88049 4.78080 4.09241 4.00840 4.97707 3.50724 5.05138 4.64220 4.14295 4.31574 5.20599 4.04597 4.31496 4.42770 4.35086 0.35933 3.42425 3.98649 6.28490 5.08803 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 32 3.35574 5.52753 3.20965 2.92537 4.44207 3.84479 3.14969 4.38433 2.62543 3.82836 4.73764 3.40740 4.34271 0.74139 2.90296 3.33141 3.59483 4.04690 5.67714 4.25679 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 33 2.61718 5.19876 3.16525 2.58688 4.52739 3.61475 3.75900 3.96195 1.42618 3.47647 4.25849 3.10666 4.00031 2.48805 2.38798 2.82997 2.54696 3.07899 5.62723 4.28483 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 34 4.01523 6.06730 0.26002 3.13438 5.59734 3.98623 4.85350 5.40535 4.10846 4.88193 5.93279 3.70977 4.68722 4.13116 4.68087 3.93011 4.38466 4.97776 6.57962 5.42054 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 35 2.45348 4.66127 3.84202 3.49131 3.41471 3.68603 4.21308 3.48829 3.46968 3.16210 4.10782 3.73861 4.27448 3.77377 3.75186 2.34038 3.25459 3.20321 4.97534 0.93432 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 36 1.38374 4.48347 4.09523 3.68409 4.43604 3.37774 4.60815 3.69717 3.64674 3.50500 4.37169 3.77809 4.10085 3.92080 3.93850 1.18299 3.06696 2.27624 5.84373 4.64664 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01463 4.62776 5.35010 0.61958 0.77255 0.48576 0.95510 37 2.80449 5.23800 2.81960 2.50944 4.58247 3.56241 3.74336 4.04286 1.45682 3.53701 4.29793 3.04494 3.96142 2.85076 2.44712 2.26546 2.53231 3.63238 5.67545 4.29796 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00987 4.62300 * 0.61958 0.77255 0.00000 * //