HMMER3/b [3.0 | March 2010] NAME PepSY_TM ACC PF03929.11 DESC PepSY-associated TM helix LENG 27 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 12:04:01 2012 NSEQ 216 EFFN 216.000000 CKSUM 355271683 GA 21.50 19.00; TC 21.50 19.00; NC 21.40 18.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.1716 0.73636 STATS LOCAL VITERBI -7.2776 0.73636 STATS LOCAL FORWARD -3.1802 0.73636 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.52080 4.40259 3.89515 4.17271 2.78044 2.32343 3.41560 2.52397 4.06291 1.73293 3.21540 4.02587 3.81638 4.29283 3.48830 2.81513 2.95754 2.31665 3.20545 3.52351 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.00000 * 1 3.23702 7.56437 8.17065 7.55421 1.73463 4.57087 5.50315 2.21481 7.33560 1.91632 1.73319 3.74573 4.59068 4.51595 5.33219 2.78790 4.37861 2.72880 2.04781 4.08197 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 2 3.19961 8.48564 2.80442 4.80375 1.99364 1.84094 4.44948 7.31003 2.84559 2.10053 3.37837 3.67949 5.35078 3.26167 2.07934 3.30895 4.31527 4.82412 3.63206 2.39986 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 3 3.42897 8.49627 1.67499 3.15254 7.84248 2.76568 3.83781 4.22911 3.58619 2.59307 4.42727 4.37209 3.19376 2.47866 1.55259 2.72964 2.95657 4.21752 3.17641 7.51664 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.03497 8.96186 3.37455 0.61958 0.77255 0.48576 0.95510 4 3.17598 7.53021 8.13723 7.52074 3.06042 4.38935 7.66302 2.31715 7.30198 0.74756 2.47243 5.11056 3.08012 7.43015 4.61247 6.64061 4.46931 2.68462 2.56053 3.95169 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00020 8.92709 9.64943 0.61958 0.77255 2.28812 0.10698 5 3.29709 9.37208 8.66156 8.74036 6.69742 2.19479 0.26556 8.83351 9.05669 7.97417 9.28420 2.78206 8.98088 8.89480 9.04683 7.81253 8.22984 8.48644 4.61329 4.66582 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00020 8.92709 9.64943 0.61958 0.77255 0.63388 0.75615 6 2.70961 8.46727 4.11349 4.21349 2.30524 3.74454 3.47499 4.23060 2.30081 4.84544 4.49104 2.87267 7.13715 2.99439 1.37584 2.56446 2.47495 3.05306 4.25091 3.46373 6 - - 2.67798 4.52283 2.79682 2.77279 3.42457 2.27328 3.73084 3.28197 2.72618 2.65447 4.10571 2.94586 2.74333 3.20924 2.94051 2.44893 2.80531 2.99301 4.21339 3.66293 0.69073 0.69570 9.66745 2.29608 0.10609 0.11782 2.19697 7 2.64013 7.56889 5.31083 5.01555 3.04620 4.01728 7.68866 2.04165 5.07544 1.83784 2.54959 4.54583 4.93226 3.94027 4.00740 6.66663 3.81093 2.46516 1.89374 1.81477 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 8 2.38428 5.32579 8.17125 4.76713 2.53753 2.58759 7.69710 1.73379 7.33602 1.24709 4.79940 5.35530 4.56285 7.46421 7.33856 3.45561 3.17451 1.97762 8.18630 3.26498 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 9 2.72899 4.63734 5.24138 4.28129 3.68330 1.36850 4.54357 2.49709 7.33433 2.02751 3.16403 3.42997 7.72600 7.46295 7.33768 2.57909 3.66342 1.67966 3.68031 4.46008 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 10 2.38994 4.80663 2.82803 2.58506 2.81121 1.57030 7.65889 2.58477 7.19872 1.59145 3.68351 5.26443 4.43303 4.61091 4.99273 4.36507 3.10786 2.42248 4.47651 7.02453 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 11 2.60785 7.56435 8.17138 7.55490 2.14674 4.39694 7.69718 1.79895 7.33614 1.46711 4.67615 7.53042 4.53319 7.46431 7.33865 4.82460 2.73950 1.54436 2.49040 4.84676 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 12 1.50367 2.51326 8.17383 7.55749 2.38898 3.66457 7.70006 3.14256 7.33883 1.77859 3.45080 7.53303 7.72884 7.46706 7.34141 1.94555 2.69236 2.12303 8.18917 7.01355 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 13 1.27780 2.88813 4.58202 7.47478 3.98113 1.58491 7.68037 4.30224 5.20424 2.25838 6.69202 7.49071 7.71468 4.99889 3.70688 2.38987 2.06737 3.30553 4.02048 7.01667 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 14 2.76386 3.66777 8.17142 7.55494 3.66314 3.05224 7.69722 2.87701 7.33618 0.97041 3.14775 7.53046 2.52865 7.46435 7.33869 3.42631 4.42505 1.73090 2.91161 7.01079 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 15 2.14874 4.28318 8.17134 7.55485 2.04204 2.58223 7.69712 2.59167 7.33609 1.51103 2.27463 7.53037 3.50224 7.46426 7.33860 3.25352 4.11332 2.49859 2.52546 4.21484 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 16 3.62338 3.34094 8.17128 7.55479 2.08744 2.61885 3.44389 2.90011 7.33604 1.18019 2.07791 5.37059 4.93481 5.41771 7.33857 4.83534 3.32905 3.03600 8.18629 2.19661 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 17 2.90634 4.12615 8.17143 7.55494 1.93568 3.23763 7.69723 2.00474 7.33619 1.14282 4.11507 7.53047 3.31708 7.46436 7.33870 3.90213 3.61675 1.79046 3.86909 7.01079 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 18 2.38125 7.56434 8.17137 7.55488 2.39820 3.54619 7.69717 2.12143 4.67205 1.29754 3.04906 7.53041 5.16545 7.46430 7.33864 4.10799 3.79436 1.25703 5.41609 7.01074 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 19 1.87677 7.56431 8.17130 5.11127 2.04410 3.97595 7.69711 2.51098 7.33606 1.28749 2.45936 7.53035 7.72631 5.24295 7.33858 3.08336 4.21234 1.89386 3.90347 4.61615 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 20 1.98537 3.11930 8.17131 7.55482 2.80465 2.18391 7.69712 2.31919 7.33607 1.38532 4.16978 4.78539 3.15300 7.46424 7.33859 2.37374 3.35446 2.45389 8.18630 4.35883 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 21 2.48529 4.78754 8.17142 7.55493 3.00096 3.73736 7.69721 1.55670 7.33617 1.35623 3.72721 7.53046 7.72640 7.46434 7.33869 4.82467 3.56609 1.39450 4.77122 3.09107 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 22 2.57725 8.59876 9.40198 9.45570 9.50192 3.05727 9.72938 9.08420 9.24503 8.77857 4.91390 8.40471 8.30199 9.23595 9.10367 0.85598 0.85955 8.07473 4.58284 4.66946 39 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 23 3.49528 8.60398 9.41188 9.48025 9.62881 0.09415 9.76972 9.16336 9.27203 8.86048 4.41204 8.40990 8.30346 9.25779 9.12558 3.59320 7.29700 4.03662 10.96367 10.02232 40 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 24 2.36392 7.56433 8.17137 7.55488 3.86917 4.28714 7.69716 1.52930 7.33612 1.26898 4.04120 7.53040 5.04750 7.46429 7.33863 3.48286 2.77589 1.58740 3.58353 3.90772 41 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 25 2.58579 4.02296 8.17121 7.55473 3.20298 3.48391 7.69709 1.39272 4.62368 2.04348 3.79339 5.50376 3.43959 7.46419 4.13414 3.70905 3.04484 1.76902 3.22782 2.42050 42 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 26 3.66277 7.56430 8.17131 7.55482 2.82530 5.33673 5.21105 2.11898 7.33607 1.11754 1.98463 4.73412 7.72632 7.46424 5.15156 3.39067 3.13486 2.09036 2.87470 3.09510 43 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.96186 9.68420 0.61958 0.77255 0.48576 0.95510 27 3.13340 4.55745 8.17109 7.55461 3.19195 4.36483 2.78988 3.54741 7.33591 1.81575 3.56851 3.14439 7.72628 7.46412 3.40390 2.60387 3.80133 2.76881 1.16979 2.76959 44 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00013 8.96179 * 0.61958 0.77255 0.00000 * //