HMMER3/b [3.0 | March 2010] NAME RLI ACC PF04068.10 DESC Possible Fer4-like domain in RNase L inhibitor, RLI LENG 35 ALPH amino RF no CS yes MAP yes DATE Sun Oct 7 03:38:14 2012 NSEQ 80 EFFN 18.940430 CKSUM 3601481837 GA 20.60 20.60; TC 21.20 21.20; NC 20.10 20.50; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.4316 0.71967 STATS LOCAL VITERBI -7.6258 0.71967 STATS LOCAL FORWARD -4.3636 0.71967 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.78937 2.46507 2.90623 3.04815 3.64823 2.94155 3.68736 3.01716 2.09091 2.63092 3.64631 3.39472 2.97451 3.26391 2.43268 3.28180 3.36571 2.80338 5.17221 3.57913 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.00000 * 1 3.62638 3.93207 3.66786 4.47640 3.17219 2.47777 3.95818 2.62870 5.02195 2.47122 1.57503 5.24912 3.83931 5.17311 3.31191 3.16453 2.80874 2.03290 5.97666 2.33497 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 2 3.55665 6.35846 3.24970 3.18095 5.70716 4.61591 2.35437 5.19221 1.93840 4.66287 5.39925 3.63585 2.49682 3.44839 0.89200 3.54966 3.71641 4.75128 6.78656 5.37825 2 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 3 3.42886 6.02870 6.83418 6.28873 5.19408 6.17327 6.65131 1.39922 4.14301 0.98977 3.91584 6.34271 6.44846 6.29482 6.19551 5.53793 5.01055 1.28189 7.03366 5.86499 3 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 4 0.66488 3.99465 5.92149 5.31495 2.47727 5.17205 2.26800 3.36715 5.11011 3.17457 4.51367 5.31328 5.53645 5.24594 5.13348 3.50640 4.24567 3.64346 5.95537 2.52475 4 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 5 4.96118 3.64004 7.06026 6.54200 2.40100 6.46147 7.00738 0.93259 6.43225 3.07598 1.84460 6.63301 6.68872 6.57795 6.50000 5.85273 5.20686 1.36498 7.31239 6.15750 5 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 6 2.33358 5.34801 5.95353 5.33760 2.58307 5.14681 5.47898 1.82800 5.11927 2.38933 4.46531 5.31352 5.50999 5.24727 3.19650 4.45885 4.20793 1.55769 1.93291 2.31758 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 7 3.91704 6.43563 1.12627 2.45188 5.77696 4.65396 1.92425 5.26597 3.61810 3.81876 5.47955 2.30566 5.06584 3.61981 3.67143 3.13101 4.15102 4.82490 6.86742 2.08206 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 8 1.83637 6.26707 3.83877 2.43578 2.14448 3.88247 3.72162 5.05080 2.26784 2.60678 5.31519 4.08984 2.45954 3.90703 2.45084 3.80192 3.53773 4.64257 6.71688 2.22267 8 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 9 3.68572 6.66379 1.07860 2.03371 5.99956 1.83387 3.43986 5.49814 2.32629 4.96531 5.71522 2.24100 5.22099 4.15081 4.34880 3.68843 3.90251 5.05100 7.09314 5.65652 9 - G 2.68693 4.42300 2.77594 2.73198 3.45833 2.40587 3.72569 3.29429 2.67815 2.69429 4.24764 2.90421 2.73526 3.18221 2.89875 2.37961 2.77295 2.98224 4.58552 3.61578 0.10156 2.34451 7.28952 1.34439 0.30205 0.48576 0.95510 10 3.57075 6.33371 3.00177 2.93790 4.65019 4.59593 2.50374 5.16545 2.23967 3.10417 5.37430 4.06327 4.98935 1.13774 1.68868 3.40919 4.05359 4.72473 6.76574 4.23215 14 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 11 6.54022 0.12666 2.22382 7.09149 8.17919 6.53071 8.11547 8.31340 7.66941 7.64944 8.78928 7.34163 7.25554 7.79518 7.65360 6.75186 7.07057 7.66770 8.75673 8.34448 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 12 4.50875 7.00040 0.89183 3.97913 6.38903 5.06162 3.42236 5.84707 1.24018 5.27118 6.06203 2.93008 5.52720 2.25528 3.55059 4.43716 4.73367 5.42123 7.34826 5.98365 16 - - 2.68625 4.42232 2.77527 2.73130 3.46361 2.40440 3.72502 3.29361 2.67748 2.69362 4.24697 2.90354 2.73747 3.18153 2.89808 2.37894 2.77527 2.98525 4.58484 3.61510 0.03939 3.27165 7.28952 0.14120 2.02736 0.48576 0.95510 13 3.25220 6.31737 5.67092 5.57994 6.96713 3.17280 6.72567 6.46597 4.19586 6.11139 6.87413 3.39617 0.22082 6.02481 6.09072 3.78225 4.91577 4.06375 8.26523 7.12246 18 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 14 3.14947 6.43799 2.58770 3.20726 5.78683 4.66605 4.86462 5.27242 0.60456 4.74064 5.48104 2.96737 5.07193 3.66191 2.75901 2.53090 4.15479 4.83135 6.86274 5.45288 19 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 15 3.61069 7.50955 6.62866 5.30465 7.31360 6.01983 5.59614 6.42559 0.37758 5.65293 6.58416 3.93018 6.28175 3.96421 1.53569 5.56911 5.62439 6.15722 7.52362 6.56487 20 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 16 7.25259 0.00694 7.88177 7.97014 8.38056 6.83491 8.45798 8.68336 8.11853 7.86297 9.14480 8.12606 7.50794 8.40395 7.87306 7.56816 7.74940 8.18414 8.79194 8.61253 21 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 17 3.00685 6.33623 3.09333 3.51425 5.68236 2.77314 3.46637 5.16904 3.08588 4.64192 5.37677 2.44280 4.98956 3.57289 2.13114 1.73680 1.27433 4.72747 6.76824 5.35666 22 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 18 2.42538 4.20241 4.32314 3.76410 5.17379 1.19042 3.25542 4.12429 3.10888 2.76644 4.36018 4.27055 5.10042 1.83102 3.59583 3.03681 3.66855 4.27858 6.48265 2.54221 23 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.61032 6.56717 0.78654 0.61958 0.77255 0.48576 0.95510 19 3.10453 5.79198 4.48094 3.82493 3.78051 4.66694 4.73479 3.54514 1.04358 2.55208 4.85909 4.25401 5.02699 3.92355 1.17497 3.93872 4.04574 4.11144 6.24936 5.02375 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00384 5.96068 6.68303 0.61958 0.77255 0.05535 2.92164 20 3.57317 6.74759 4.72180 1.06533 6.17063 5.09864 5.13303 5.57248 0.91327 3.73354 5.80121 4.57597 5.46619 4.24217 2.66134 4.35592 4.58372 3.08975 7.07249 5.79435 25 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 21 5.99656 0.82223 8.03128 7.47687 4.94839 7.41880 7.78390 4.24550 7.36622 1.07275 1.74431 7.77773 7.24567 6.91167 7.14210 6.94426 6.19537 4.67655 7.37816 6.56397 26 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 22 1.59551 6.07287 4.22886 2.42476 5.31865 3.49843 4.87228 2.13975 1.67189 3.66171 3.41283 4.19410 5.06038 2.87384 3.17346 3.24793 4.07599 2.63617 6.57002 3.31936 27 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 23 3.27716 6.35715 4.11850 3.00227 5.70417 4.06266 4.02162 4.24750 1.35172 4.27539 5.39919 3.31732 5.02510 3.90877 0.87322 3.43942 4.09113 4.74926 6.78400 3.66811 28 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 24 3.05860 4.45362 5.76485 5.16009 1.32299 5.11372 4.33048 3.80010 4.27337 1.64136 3.73775 3.57015 5.47907 3.48482 5.04463 1.88572 3.84925 3.01151 5.98343 2.31251 29 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 25 4.98857 0.83271 2.73991 2.25619 7.00597 1.41791 5.75730 6.57707 3.10032 6.01254 6.87434 2.78824 5.81702 4.92568 5.50111 4.83229 5.29075 6.09463 8.15338 6.57151 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 26 3.47344 3.82254 5.93759 5.32238 3.07180 5.14469 5.47785 2.89197 3.11760 1.43725 3.71221 5.30668 0.94238 5.23838 5.11589 4.45604 4.20735 3.59493 5.97079 2.82947 31 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 27 1.46980 5.35234 5.88242 5.27073 4.44585 2.73155 5.46531 2.20626 4.23359 2.67588 3.39771 5.27948 3.40493 5.20798 3.71526 4.44318 4.20210 1.06788 5.97452 4.79733 32 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.63167 6.56717 0.76166 0.61958 0.77255 0.48576 0.95510 28 2.93814 5.90002 3.64728 2.31969 5.24758 4.16731 4.34851 3.60038 1.79349 4.20328 4.94121 3.23356 4.55984 2.67587 1.16492 3.07735 2.64543 4.29226 6.32841 4.92305 33 - . 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00392 5.93942 6.66177 0.61958 0.77255 2.47377 0.08803 29 2.24932 3.99863 4.41657 2.23689 3.07685 4.44670 4.70912 1.82075 3.14717 1.68580 4.21434 2.85413 3.26679 4.08128 3.46326 3.19367 3.30272 3.01562 5.69739 4.47323 34 - . 2.68685 4.42292 2.77343 2.73190 3.45936 2.40580 3.72562 3.29421 2.67587 2.69422 4.24757 2.90414 2.73807 3.18214 2.89868 2.37954 2.77533 2.98285 4.58544 3.61453 0.23485 1.57007 6.66177 1.10610 0.40174 0.05414 2.94310 30 3.89392 5.70679 3.54927 3.64192 4.85869 4.83722 2.92891 2.86063 4.04191 1.89208 4.08963 2.01965 5.21926 2.59855 3.85243 4.07079 3.06086 1.19130 6.27583 5.02389 39 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 31 4.04165 6.51318 3.68692 3.73176 5.89046 4.79213 3.54357 5.35156 1.30941 3.79090 5.55630 2.91372 4.02874 3.48434 0.83999 4.00286 3.65447 4.92342 6.90121 5.53649 40 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 32 3.16391 5.49129 5.14613 4.56876 4.60468 4.99049 5.27385 2.01666 3.42860 2.17250 2.60115 2.95504 4.12703 3.75719 3.38373 2.16683 1.48341 2.56352 6.09351 4.15342 41 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 33 3.84103 6.35633 2.97312 3.01587 5.70206 0.82882 4.01334 5.18948 3.09978 4.66183 5.39733 3.04089 2.17487 3.55677 3.26579 2.90809 2.86587 4.74742 6.78803 5.37504 42 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 34 3.22747 6.33360 2.67768 2.68228 5.67991 3.18807 3.43536 4.27208 1.37813 4.16632 5.37393 3.56030 4.98688 2.16149 1.73355 3.07144 4.05120 3.20489 6.76554 3.65460 43 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00209 6.56717 7.28952 0.61958 0.77255 0.48576 0.95510 35 3.82024 6.33098 3.05868 2.00359 4.67357 2.21648 4.78106 4.54435 1.71867 1.78993 4.23897 3.53446 4.00370 3.25390 2.35612 2.97463 3.13492 4.18912 6.76364 5.35266 44 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00141 6.56649 * 0.61958 0.77255 0.00000 * //