# STOCKHOLM 1.0 #=GF ID T2SM #=GF AC PF04612.7 #=GF DE Type II secretion system (T2SS), protein M #=GF PI GspM; #=GF AU Mifsud W, Desvaux M #=GF SE Pfam-B_5302 (release 7.5) #=GF GA 25.90 25.90; #=GF TC 25.90 26.00; #=GF NC 25.80 25.80; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF RN [1] #=GF RM 10322014 #=GF RT Direct interaction of the EpsL and EpsM proteins of the general #=GF RT secretion apparatus in Vibrio cholerae. #=GF RA Sandkvist M, Hough LP, Bagdasarian MM, Bagdasarian M; #=GF RL J Bacteriol 1999;181:3129-3135. #=GF RN [2] #=GF RM 15223057 #=GF RT The general secretory pathway: a general misnomer?. #=GF RA Desvaux M, Parham NJ, Scott-Tucker A, Henderson IR; #=GF RL Trends Microbiol. 2004;12:306-309. #=GF RN [3] #=GF RM 14600218 #=GF RT Type II protein secretion and its relationship to bacterial type #=GF RT IV pili and archaeal flagella. #=GF RA Peabody CR, Chung YJ, Yen MR, Vidal-Ingigliardi D, Pugsley AP, #=GF RA Saier MH Jr; #=GF RL Microbiology. 2003;149:3051-3072. #=GF RN [4] #=GF RM 19299134 #=GF RT Secretion and subcellular localizations of bacterial proteins: a #=GF RT semantic awareness issue. #=GF RA Desvaux M, Hebraud M, Talon R, Henderson IR; #=GF RL Trends Microbiol. 2009;17:139-145. #=GF DR INTERPRO; IPR007690; #=GF DR TC; 3.A.15; #=GF DR SCOP; 1uv7; fa; #=GF CC This family of membrane proteins consists of Type II secretion #=GF CC system protein M sequences from several Gram-negative (diderm) #=GF CC bacteria. The precise function of these proteins is unknown, #=GF CC though in Vibrio cholerae, the T2SM (EpsM) protein interacts #=GF CC with the T2SL (EpsL) protein, and also forms homodimers [1]. #=GF SQ 63 #=GS A3UEX1_9RHOB/7-165 AC A3UEX1.1 #=GS Q0ASQ4_MARMM/5-163 AC Q0ASQ4.1 #=GS Q1NDR5_9SPHN/1-158 AC Q1NDR5.1 #=GS Q9ABP4_CAUCR/5-157 AC Q9ABP4.1 #=GS Q8PPI2_XANAC/5-157 AC Q8PPI2.1 #=GS Q8P5C5_XANCP/5-144 AC Q8P5C5.1 #=GS A6V156_PSEA7/5-149 AC A6V156.1 #=GS A4VFT9_PSEU5/13-169 AC A4VFT9.1 #=GS Q9ZFW8_PSEAC/14-170 AC Q9ZFW8.1 #=GS Q02PQ8_PSEAB/17-174 AC Q02PQ8.1 #=GS A4XWF6_PSEMY/17-173 AC A4XWF6.1 #=GS A3SDU2_9RHOB/1-150 AC A3SDU2.1 #=GS A5V9H7_SPHWW/17-167 AC A5V9H7.1 #=GS Q2Y7T4_NITMU/2-161 AC Q2Y7T4.1 #=GS B2T7P8_BURPP/6-165 AC B2T7P8.1 #=GS B1YQ40_BURA4/7-166 AC B1YQ40.1 #=GS A3MPL1_BURM7/14-173 AC A3MPL1.1 #=GS C6BGG9_RALP1/26-185 AC C6BGG9.1 #=GS Q0K5X1_CUPNH/40-199 AC Q0K5X1.1 #=GS Q1LHW4_RALME/25-184 AC Q1LHW4.1 #=GS A2SKJ8_METPP/13-167 AC A2SKJ8.1 #=GS A1W3T9_ACISJ/17-159 AC A1W3T9.1 #=GS A6VAT2_PSEA7/20-183 AC A6VAT2.1 #=GS Q02HH6_PSEAB/22-191 AC Q02HH6.1 #=GS Q1IB25_PSEE4/11-155 AC Q1IB25.1 #=GS Q3KBE0_PSEPF/17-170 AC Q3KBE0.1 #=GS Q4KD21_PSEF5/17-183 AC Q4KD21.1 #=GS GSPM_PECCC/1-161 AC P31709.1 #=GS GSPM_ERWCH/1-160 AC Q47422.1 #=GS Q7BSV4_ECO57/1-160 AC Q7BSV4.1 #=GS A6T4U0_KLEP7/1-158 AC A6T4U0.1 #=GS GSPM_KLEPN/1-158 AC P15752.1 #=GS Q1ZL56_PHOAS/1-160 AC Q1ZL56.1 #=GS Q5E1Y6_VIBF1/1-161 AC Q5E1Y6.1 #=GS GSPM_VIBCH/5-164 AC P41851.1 #=GS GSPM_VIBCH/5-164 DR PDB; 1UV7 A; 86-164; #=GS GSPM_VIBCH/5-164 DR PDB; 1UV7 B; 86-163; #=GS A6D4H3_9VIBR/5-163 AC A6D4H3.1 #=GS A3UP97_VIBSP/5-162 AC A3UP97.1 #=GS Q7MPY7_VIBVY/5-163 AC Q7MPY7.1 #=GS Q87TC8_VIBPA/6-164 AC Q87TC8.1 #=GS GSPM_AERHY/2-162 AC P41850.1 #=GS Q0I0D9_SHESR/1-158 AC Q0I0D9.1 #=GS A1S1Y3_SHEAM/1-158 AC A1S1Y3.1 #=GS F2GBM0_ALTMD/1-159 AC F2GBM0.1 #=GS Q15ZB6_PSEA6/1-159 AC Q15ZB6.1 #=GS Q1ZIZ1_9GAMM/2-159 AC Q1ZIZ1.1 #=GS A1SR65_PSYIN/2-159 AC A1SR65.1 #=GS Q31WM9_SHIBS/22-178 AC Q31WM9.1 #=GS Q1YQU6_9GAMM/7-161 AC Q1YQU6.1 #=GS A8AIM9_CITK8/5-159 AC A8AIM9.1 #=GS Q8FCY8_ECOL6/7-160 AC Q8FCY8.1 #=GS A1JQE2_YERE8/1-159 AC A1JQE2.1 #=GS Q31J18_THICR/7-166 AC Q31J18.1 #=GS A3WP21_9GAMM/17-175 AC A3WP21.1 #=GS Q5QY94_IDILO/12-171 AC Q5QY94.1 #=GS A1WZN8_HALHL/10-173 AC A1WZN8.1 #=GS Q0A613_ALHEH/2-163 AC Q0A613.1 #=GS A3YCB4_9GAMM/14-171 AC A3YCB4.1 #=GS Q21EQ3_SACD2/4-161 AC Q21EQ3.1 #=GS Q1N4H7_9GAMM/22-176 AC Q1N4H7.1 #=GS A4BDW7_9GAMM/6-161 AC A4BDW7.1 #=GS A0YBF1_9GAMM/11-168 AC A0YBF1.1 #=GS A6EW52_9ALTE/11-176 AC A6EW52.1 #=GS A1U0C6_MARAV/11-176 AC A1U0C6.1 A3UEX1_9RHOB/7-165 FTPLIKAFQARTAREQALLAGLAVLVVLTIAWFGVLAPAMSWRADAARRYANAAEGYESILVQASEYRALS.AQAVNADDRE.........PLRTLADRTARERGL....AISRVQPLEDGRLGVWMEQADADSLMGWLSLLSREHGVNAERVSLDRE..............GETRVRAQLTL.VRAG Q0ASQ4_MARMM/5-163 FAPVLAWWDGLSSREQVMMAVLGALAMILLVSLLIIQPLLGAHDRARDSYAASMRLYRAVEADADTVQALAAAAPASTAPAQ.........SLRAVAGSMALRHDI....ALARMVPGEDGRLTVNIDRAETAAILAWLVDLDRRYGIRAQASTLDRD..............ADGFVSASFVL..SRG Q1NDR5_9SPHN/1-158 MDRLGLYWAERSPRERWMLGVMFALLAIVILWFGIAVPLDRAQRDARDRLVEATERNAAIRATVAQLKALP.RAPANVGSTV.........PLDQFVGQSAGEAGL....TLERAQAQGNDRMDIAIASVRPIALFSWLSTLE.GQGVRVVTMSARPSP.............TAGSISVQAVL..ERG Q9ABP4_CAUCR/5-157 LEAARLWWTGRTGREQVLLAVMVAALVVVIGWYGVATPLWSAAKTAQVRVDKAATQLATLRGLAA.......GASRATAGGA.........APQAVVEAAASRVGL....PIARHRQDANGRFTIWIAAIDSKILLPWTAGLEREGAVKVTDFTASRL..............DNGLIEAEITF.ARAA Q8PPI2_XANAC/5-157 LQRGTQWWQTRAPRERRMLGVMCAALAAFVGWYALYVPLRHWHDRAWARYADAAQLALDASAQAASTRRAA.ALGSA..............ALADIIASSARDAGV....NITSQQRSAVGGVDVQIEAVSAAALFGWLERLRQAHGLAPTQLSVAR...............EQGQLRVRCGF.AESG Q8P5C5_XANCP/5-144 RHRSHRWWQQRAPRERVMLAVMGAAIAAFIAWYAILVPLRQWRSTAQARYDTAAQAL..LDAQGRQRSAVV....................TLADIL.QAARDAGV....AIVPAPRAVAGAVELQIDAVNSPALFAWLERLRTAHGLAPTQLQITR...............HAQQLQVRC......R A6V156_PSEA7/5-149 PSALHARWLRLPTRERRALLGLAAFLGLSLAWVLLWQPQRQALLDAERHYQDELRLHADLQRLPGD......TGGGPRIDAT.........ALPGLLARSSAQARL....NVERMDSEGSGRMNLALEG.QLADLLGWFESLG.RSGVEVTSLDLE....................VSPDALA..RAR A4VFT9_PSEU5/13-169 DSPLWQRWQRLAPRERTSLSLLGAFLLAVLFYLWLWLPAQRQAAEARDYYQAQRELHAYMEQNTELARQME.RSNQVELAPE.........QLQGVITESAQQGNL....SIESFDNGSDGSLQVSLPGASYALLLRWFDTLQ.GQGVSVTEVSLERA..............GEGLVNARVSF..RAG Q9ZFW8_PSEAC/14-170 QNPLMLRWQGLPPRDRLALGLLAAFLLLVLLYLLLWRPVSQNLERARGFLQQQRTLHAYLQEHAPQVRARQ.VAPQASIEPA.........ALQGLVTASAASQGL....NVERLDNQGDGGLQVSLQPVEFARLLQWLVSLQ.EQGVRVEEAGLERA..............DKGLVSSRLLL..RAG Q02PQ8_PSEAB/17-174 TSQLAIRWRGLPARDRLALLWLGAFLLLVVLYLALWRPAERHLQSARQYFTEQRALHAYIQQQAPNVRQADAAAPQAQIDPA.........ALQGMVTASAAQAGL....SVERLDNEGEGAVQVALQPAPFAKLLPWLEQLN.GQGVQVAEAGLDRQ..............VDGRVSARLSL..RVE A4XWF6_PSEMY/17-173 RSTLAQRWQGLPARDRLALLVLSLFLLLVLFYLLLWQPAQRHAQAARAAFEEQRALYAYLQSRAPEVRGRD.LQPRSSPDPA.........RLQGLVTASAAEQGL....VIERLDGEGQGAVQVSLQPAAFAQLLRWIELLE.GQGIRVEELGLDRR..............EENQVAARLSL..RVG A3SDU2_9RHOB/1-150 MKA....FAALNPRERRLVGIVLPLAIVVVGYQFLWAPLHRAQAEARADIQAFR.....LVQDTAALASVDTIVSLQPLNET.........PLATRITTSASAANL....TLRRIEPEND.SIRVTLDDTPFATILLWLSDLEEQHDVRVEALEVDRRP.............APGRVSARLLL..GSL A5V9H7_SPHWW/17-167 RQKAIGLWQARSRREQWLLGGLAAMVALYVLVAMVILPVQRARAQALSDIRTYESLSARLRSAGPLGQ.....APAQPQAGG.........SPAAVLSASAARFGM......VPVVNEGGEGIRVTVADAPYESLLRWIAEVEQTSRLRVVRLRLDRRP.............SSGFVSAELMV....R Q2Y7T4_NITMU/2-161 RKQLRKAWESRSPRERRVITILGMILSAGL.YLGLVSSADRARTRLRSNLPQLRVQAEEFEQQAAEYERIK.VTPSPPPLSG.........DLHALAQTQADILGLS..HALNGIDALGDDQVQVTFKAVPFADWLKWTVAMQ.LQRVRFEKGRIEALP.............EPGIVTVTGTF.VRAT B2T7P8_BURPP/6-165 AQTWAGFWEQRTEREKALLTWGGGVLAVVIAWSVLWAPAQEGRSHLRESLPAMQRQLAQMTAQANEARQLSAAAQGVAPTGA.........ALKDALTASLSDHGL....AATQVQVIGN.AVQIQLKNASFPAWTAWVDDVRKQFKVQVSEAHATALK.............EDGQVDLTASL.QPST B1YQ40_BURA4/7-166 NQTLAQFWGERSQRERTLLGWGGAVLAVAIAYSVLWSPAQEGRARIRRELPTMRSELAQMTAQANEAKSLTAAAQGVAPTGL.........ALKDALTASLSDHGL....QGAQVQVVGN.GVQIQLKNVPFPVWTQWLDDARRQFKVQVGEAHVTGLK.............EDGQVDLTAVM.QPST A3MPL1_BURM7/14-173 NEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMRHELAEMTAQANEARTLAGAAQGVAPTGV.........ALKDALAASLSDHGL....AAAAPQVVGG.GVQIQLKNASFPAWTQWLDDVRRQFKAQVVEAHVSALK.............EDGQVDLTAVL.QPAS C6BGG9_RALP1/26-185 RDAATTFWMQREPRERRILAGGGVVLLLVIVYLVLWEPAFEGQRRIEKALPQMRTQLAEMETLGQEARGLSAIAAAPVPRGA.........ELQQALNTSLTNHGL....KATRMAMSGE.SVQVQLDKVPFGAVAEWLQEVRQAQRMKVIDTNIKYVG.............ATALVNVTATL.QGPA Q0K5X1_CUPNH/40-199 QERFNAFWSARNPREQAILAGGGALLALVIGYLVLWEPAADGRERLARNLPKLRADLAEMESLAQEARGLK.ATPAPALRGD.........ALTQALQDSLGQHGL....KATRLAAGADNSVQVQLDKVPFGAVSGWLQDVRQQQRMKVIDARIVYVG.............ATALVNVSATL.QGPG Q1LHW4_RALME/25-184 REQVDVFWTARNPREQAILGGGAVVLVLVFGYLLLWEPASVEGARLMRNLPVLRADLAEMETLAQEARGLS.ANRAPSLRGD.........ALTQALQDSLVQHGL....KATRLMTTGDNAVQIQLDKVPFGSVAGWLQDVRLQQRLKVTDTRISYVG.............ATALVNMTATL.QGPG A2SKJ8_METPP/13-167 SEQWRARWRRMARRERRLITAAAIVVGVALVWMLGVQPAWRSLRDTPAQIDAVEFQLQQMQRQAAEARELR.KLPTVKPAQA...........EAALRGATERLG.....TNARLTLQGD.RATLTLSGVPGEALAAWLGEVRSAARARPDEAKLSHG..............PNGYSGSVLLT.LPRP A1W3T9_ACISJ/17-159 LAALRAHWARMAPREQSLVLAAAAVVGLALLWWVLLAPALQQLRGSGARHAAVDAQLQRMQALQAEALQLK.DAPRPPGGE..........ALRTLQSTLAQQLG.....AAAQMNVAGD.RATVTFKGAPAEALAQWLNQARSTARAVPLEARLVQSA............................A A6VAT2_PSEA7/20-183 LRRAQAYWRRLAPRERRTVAGGGLALGLALTWQLFVEPPLARIEHWQAELPRLRSQAAAVDAVLGEVEALR....GPLLDGA.........ADAQAIGRSLRDQGL....DGFQLEAIGPGQWQLDFASASGEALLRWLARSPTALRLSVDQARVTRLEAPT......EEQAAGGLVSASIHL.QSTS Q02HH6_PSEAB/22-191 LLRLQAYWRQLAPRERKILAGGGLALCLALTWQVFIDPPLARIEHWQAELPRLRAQAAAVDGVLREVEALR....GPTLSGT.........ADAEAIRRSLRDQGL....DGFQLDAPQPGQWQLDFASVSGEALLRWLARSPAALRLSVSEAQVTRLDAPSEERSGSSNELSGGLVSASIHL.QSTS Q1IB25_PSEE4/11-155 RGQARQRWQALAPRERRAVALAGAVLGSFFCWQVLVAPALTRIEHWNTETPKLRSQAQALDALLGQRSA......................DLAGALAQSLDEAGL...RAHSQLDAEGD.GWHLAWRQAPAEPAMAWLQRIPPRLGLTIGQLSLRR...............DPGAGTGPVTF..SGT Q3KBE0_PSEPF/17-170 NAELQARWQPLAVREKRMVGGMAALLLGLFVWVALVQPPLKKIAASQVETPKLRAQAEALEVLLRDVSVRPDGQ.................NLEQSLQQTLQASGL....GGHYQLAAASAGWQLTFDAAPADAVLDWLLSQPRNFSLQVVEARLQRADDAA.......TDDTAGTLSGTV......R Q4KD21_PSEF5/17-183 RAQALGHWNGLALREKRLLGATALGLLGLLLWLLLIQPPLKKIDYWQAETPKLRSQAEALEVLLHEVAAGSRNAPGE..............SLEQALRQALDAAGLQGRYQLQHADQAGPESWRLTFEQAPADAVVGWLLGAPRQFSLQVVEARLQRADAAA.......AQDSAGTLSGTVRMDQAQG GSPM_PECCC/1-161 MNELRQRWQAMSQRERQLMVVCAAVLLLCVVYYAILQPWQEREDLWERTISREQQTVNWMQKQASSIPRGNQAQGDNSQRDV.........SLPILISQSTKRYGL....TVVRLQPQGS.QASVTLGQSDFNSLLRWLGELEQKNGVKVISLDVNAVE............QSPGIVDVTRLM.LERT GSPM_ERWCH/1-160 MNELRRRWQVMSQRERLMALACGGLVVLCLLYYLIWAPWQESVRQWQMTVERERQTVRWMQQQPPRFRRRK.VRGGRXPVAI.........SANGIGAQSAVRYGI....TVLRMQPQES.QVSVTLARSDFNNLLHWLAELEQKNGVITQGIDVTAVP............NSPGIVEVTRLS.LERV Q7BSV4_ECO57/1-160 MNELKKRLQYVSPRERRLLIGCVALLVVVFVYYVLWQPWLIREDKWRTVVTREKNTVEWMKQQVPNIKRRE.ASMPEQGEPL.........GLSAAVTRTSAAYGV....SVTRLQPQGE.RLAVTLAPVEFNALMQWLTQLERRHRIRTMVFDVAAQG............NPPGQVTVNRLV.LSQD A6T4U0_KLEP7/1-158 MANLLIWWRQRTPSEQRLLLGLTGLLAACAFWYGLWQPWRAREAQWRQTLVKEQASLRWMTEQAPRLQQLS.QQPAPAAKE..........ALTALVMREAASHGL....TVIRLQPQGK.RLQITLQHCAFQALIDWLDAPA.MRGVNAISLSVTGQP............SRPGWVTVNHLL.LERD GSPM_KLEPN/1-158 MHNLLALWQQRTRRERCLLLGMAVVLLIGLVYYTLWQPWQNREAQWRQTLAREQASLQWMRQQTPLIRQLRNQKPPTAPE...........EPSTVIMREAARHGL....TIVRLQPQGS.RLSLTVQPADFQALMAWLDALG.QAGMTTATLAVTAVA............QQPGWVTVNTLV.LERS Q1ZL56_PHOAS/1-160 MAEIKAWWKALSQREQYLVMGAGGVLLLAILYWGLWQPLNQRTELAQTRIQSERQLLSWVEGKANKITAFKRAGGTVNVSDK.........GLNQVVNETTERFKI....ELIRMQPRND.AIQVWVKPVPFNALLNWLSYLQDNFGIETQFIDISKTD.............QNGMVEVNRLQ.LGRG Q5E1Y6_VIBF1/1-161 MKAFMAWWQSISPRERILVAGGGVALLIAVIYWGGIKPLNDRAELAQNRINNERNLLAWVQKKADTIITLR.GGASSSSQSAI.......RPMNQVIPSSTRQFKI....ELIRMQPRGE.QMQVWVKPLPFNSLVNWLAFLRDSQGINVQFLDLNKTD.............VEGVVEVNRLQ.LTRE GSPM_VIBCH/5-164 LAPVQAWWRSVTPREQKMVMGMGALTVLAIAYWGIWQPLSERTAQAQARLQTEKQLLSWVSENANDIVTLRAQGGSDAPSDQ.........PLNQVITNSTRQFNI....ELIRVQPRGE.MMQVWIQPLPFSQLVSWIAYLQERQGVSVDAIDIDRGK.............VNGVVEVKRLQ.LKRG #=GR GSPM_VIBCH/5-164 SS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-.........-HHHHHHHHHHHCT-....-EEEEEEETT.EEEEEE--B-HHHHHHHHHHHHHHS--EEEEEEEEE-X.............XXX-EEEEEEE.EE-X A6D4H3_9VIBR/5-163 LLSAQSWWLSISQREQRLVLACSVVAIIGIIYWGILAPFAQRTENAQMRIQSERQLLSWVSEQADTIVEKR.RAGGVVVSKQ.........PLNQVITSSTNRFNV....ELIRMQPRND.QLQVWIKPIPFEFFVNWLFYLQESHGVTVENMDIDKAD.............LSGVIEVNRLQ.FKRG A3UP97_VIBSP/5-162 IEPLQAWWASISQREQRLVIGCSILLILGVVYWGLIQPLSQRAELAQSRIQSEKQLLAWVTDKANQVVELR.GSGGISASQ..........PLNQSVPASMRRFNI....ELIRVQPRGE.MLQVWIKPVPFNKFVDWLTYLKEKQGVEVEFMDIDRSD.............SPGVIEINRLQ.FKRG Q7MPY7_VIBVY/5-163 LNMFQAWWSSISQREQRLVVVCGVFGLIGLIYWGVLQPINARAEQAQLRIQSEKQLLSWVSEKADELTGLR.ASGGVSFSNQ.........PLNQVIASSARQFKV....ELQRVQPRNE.MLQVWVAPMPFNRLVDWLTFLKEKQGIEVEFMDIDRGK.............ESGLVEVNRLQ.FKRG Q87TC8_VIBPA/6-164 ISQAQAWWSGISQREQRLVLGCGAFAILGILYWGLLQPMSQRAELAQSRIQSEKQLLTWVQDKADDITALR.KSGGVSFSNQ.........PLNQLVSSSARRFKV....ELIRVQPRND.SVQVWIKPLAFNQLVDWLRYLKEQQGIEVEFLDIDRTD.............QAGMIDVNRLQ.FKRG GSPM_AERHY/2-162 MDKLQGWWRSISAREQRLVAVGGSCLLIGFCYWIVWQPIANRIAERERQVLSQQQTLAWLKEKGEEVLAMQGGQGRQIDTSG.........TLEGVVNRTAFNQKI....KIARLQPQGQ.ELQVWIDTVQFDDLLIWLASLADQHGVQVQVIEVAREN............LAPGLVKVRRLQ.LSRP Q0I0D9_SHESR/1-158 MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQTANKIAGLK.QSGAKPTMSG.........SLSSVVNQTAGTYGL....VITRMQPQGD.KIQVWMDDVPFDALLNYLSDLVQKKGLSLESVDLAEAD.............AAGYVKVRRIQ..LAQ A1S1Y3_SHEAM/1-158 MDKLKAWWDGLATREQQLVGAGGFMLVIAVFYFGIWSPISNAEEAALGRLKAQQQTLSYVKDTANRLAGLR.QSGSRPSLTG.........SMTNVVNQTASRYGL....TITRMQPQGN.KIQLWMDDVPFDALLGYLGDLVQQKGLSLELLDVGETD.............TPGMVKVRRIQ..LAQ F2GBM0_ALTMD/1-159 MNALLEKYKALTEREQKLVLISAVMIAIALFYFAVWSPLNTALDKQKQLLDNQQSLLVWVKDSGARAQQLRRSTGSKRAFSG.........SLPQAVNRTTAQHDI....AISRMQPQGD.ELQVWVDQAPFNAVLDWLKAME.NMGVVILQADIAEAD.............APGYIKIRRLQ.LGKA Q15ZB6_PSEA6/1-159 MNTLKQKFSQLTEREQRLVLISAVVVVVGMFYWLVWSPLNQAIERDQKALDSQKSLLSWVQKSANRAIQLRAAKGVSAGFNG.........SLAQAANQTAANANI....PIARMQPQGD.ELQVWVDQAPFNGVLDWLKSLE.EMGVSILDLDIAEAD.............APGQVKIRRLK.LGKS Q1ZIZ1_9GAMM/2-159 QEKWRIWWATSNIKERRLVVVIVLFLAFSLCYWGAWKPLSTRLDNSEIQLLRTQKTLSWVQEKASLLLKSGRGSQVAQVPQS.........SLVEVINRSAKRSGI....SFTRILNRND.TLEVWIADVEFNNTMDWLTLLKNKYGIEVLNVDINQAL.............KPGYIKINRLV...LG A1SR65_PSYIN/2-159 VERLNTWWESITEREQQLSLVSVLLILIAIIYWGIWQPLSIGLDNSENQLQRAQQTLSTTQQRATLLVSAGVGQGSAVSENQ.........NVTQIVTISAQQNGI....TFSRIINRNE.QVEVQVSNVEFDRFINWVSVLSSQYSVSVLNADISRAD.............EEGYIKVTRLS...LG Q31WM9_SHIBS/22-178 EHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPA............QVSRVISDSASAHSV....VIKRIAERGE.NIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDASAAE.............KTGMVNVQRLE.FGRG Q1YQU6_9GAMM/7-161 VRGISAWLSQRQPRERIIVVVGAGIVFVVAVYLALL.PSLERSTELQERHRILQADLHWLSEQSDSVSRLSNSCVDKTIKPG.........AAKDVINRLVRRNQI....KLVKIAEQAQGKYALSLESINANRLLQFAHQLA.CQGLKTNLLDVSRS..............DATVTNYTARM....E A8AIM9_CITK8/5-159 IAQLKARYQNYSDRERGLITLCAAAMCCAVIYYGGIIPLDHMIQNSQSTLMRQKETLRWMRDEIDKNH.....LQAKVLKTN.........NPRTVIEESAKEIHL....ALSDIRQDER.SLSFVVEQVNIYELKNWLREVNVTSGVQLQKMDLRPVD.............RQSDVKANITL.SWNK Q8FCY8_ECOL6/7-160 REMIKSWWAEKSTSEKQIVAALAVLSLGVFCWLAVIKPIDTYIEEHQSHAQKIKKDIKWMQDQASTHGLLGHPALTQ..............PIKNILLEEAKRENL....TIT.LENGPDNTLTINPVTAPLENVSRWLTTAQITYGIVIEDLQFTLA..............GNEEITLKHLS.FREQ A1JQE2_YERE8/1-159 MTKIKQRWQNYSKREQLIFSLGGLVLLGLIVSQGIVAPLENYQHQSTQNLHSAQRDFAALLQQQERISRLQAQRPPQYAL...........SADRALHESAHQKNM....TITLLEANAN.RAVVAPLTLPFSQLLSWLEQLEAQYGLQASQLKLVADV............DNLSRVHITTLV.LQRA Q31J18_THICR/7-166 KQTALQIWKGFSQRDQRAIMILGGVLLCAVLYFLIWLPSEHAKQQAQQKLALSQQKWDWLNEQLPKVAQRGPVLPASTLKTT........EGLMQFIQAQLRQLNLY..QTIERIETQGH.KVVVEFKEVNAPRLFRWLSQQE.QQGLIAYSADLKPL..............QPGIVTAKVIF..EVS A3WP21_9GAMM/17-175 VQSAQQRWAQLAVREQNLVKGLGAVIIVAIIYFAIWQPTYSAQQLAERRLEGQQQQLLWLREQVARYQSLS.ATQAQSEVSG.........SLSQRVNEAAASNKI....QIARMQPQNN.GLIVSVDETSYQQAMSWLYALEQTYQLQVTTLDLARLD.............ELGKVRVRQVL.VTEK Q5QY94_IDILO/12-171 LDLGKQRWQQFNQREQSLLAVLAGVLFIAFLYFVIWQPSSQAVANAERQLAAQQQQYQWVQQAIARYKKLEESSSEQQSASG.........SVSQRINRAAAAQDI....QIARLQPQGQ.EYLLSVDEVAFSDLLSFLAELEQRQGLSLKAVDIAKLN.............TPGQVRLRKLL.VSEA A1WZN8_HALHL/10-173 RAEAERFWSARNPRERWLLGSGGLLVLVVVPYVAVWEPLTERRDQLQAQVAEQRQDLAWMRSAAEEIHAHD.GDNGSAEPVTD......ERSLLSLVDRAAREAGID..DQLSRVQPDGDGTLRVWMDRVPFDELMNWLDGLQRAAGVEVDALTVERTQ.............EDGLVNVRLTL..EVG Q0A613_ALHEH/2-163 KERLLAHWQGLEPRERRILLAGALVLAVLLPWGGIWLPLSDRAETLRGEVAEARAQQAWMAAAAERVRQAG.GATAVPGEGRA.......DSLLGRVDRSAGDYGLG..ERLERLQPDGDQRVRVWLERADFDQMLYWLDALA.ETGVRVHALSLEPLD.............APGRVNARLTL..ESE A3YCB4_9GAMM/14-171 LLPLLQKYQALSKREQKLVACLAFVLFIYLLYSLLWVPIHQQKEVAQKRVDANLKSYYLLVENAPLLTKSL.GDSGVKLEDRS......GQALQALVSRTMRKQKL....VAQRMNLDGDSRLQVWVENTSYSDINKWMTILA.KEKVSIYSVQFASR..............ELGVVDMRLTL....D Q21EQ3_SACD2/4-161 VNEFKEWWGNASSRDQISLVVCSVCVALYILFMGVLSPLYDMRDAQVRSHESAVVTLARVKELAAQIKGSGEGNGRSGGP...........SIVDLVDSSLRSHGL....RLSNMQPSGRSDVRLRLDEVSFNSLLAWLNEMEVEKGLQVKDMSIAESS.............NIGMVSVTLRL..HQE Q1N4H7_9GAMM/22-176 YQSVHNWYSQLGTNDQSIVKVLLFVISLVLIYAWIWQPAVDARDAANKSFNKELSFHESLKENAYRFKG...GSSSNQPSGG.........SILSIVSATAKAKKI....ELRRFEPDGATRLRIWLDKAEFDAVIDWIEILEAEKGILVEQISLDKV..............SSGRVNVRAVL...TQ A4BDW7_9GAMM/6-161 LEPLREKWLSLSRRDQQAARLLGISLLIAIIVFGLIVPLASWRQDLQRELANAQQTLQELTALAPQAMAVTGGATELNPS...........IMNSEIRRQAARYGI....EIQRFEPDGE.LLRVWLDDARYPSVVQWLGGLE.NMGIGHTELALDDRP.............NPGFVNVRVTF..GVG A0YBF1_9GAMM/11-168 LQQFSVRYESLENRDRLAIKLLLGFIVTVIIIFGMILPASNYKASSEAYYRNSLETLTWMQGNKPLIDSVS.QRRLVRDSGQ.........SLLGIANKTSKGFNL....TFKRYQPVGESGLSLWLENESFNNVILWLERLDKRHGISVDEISVDRDE.............QDGLVSIRLVL...QG A6EW52_9ALTE/11-176 VGKLIAQYDQLPRRDQQALSVLAVAILLGILYFGVWRPATGFHDEAVDARERATELLAWLETNRKSLERLS.SAGTSQGGAAGGDTPADGRALMALVTRSASEAGL....SLQRFEPSGEDAIRVWLEGAPFTEVASWLERLNTGHGVEIDQASMDRQN.............DPGIVSVRLTL....T A1U0C6_MARAV/11-176 VGKLIARYDQLPTRDRQALTALGIALLLALIYLLIWQPVTQFHDRAASSRENAAELLAWMRANETTIQRLG.SAGGAATTAAGADKPEDGRALMALVTRSAGEAGL....SLQRFEPSGEGAIRVWLENAAYADVAAWLERLHSNHGVVIDQAALDRGN.............GPGQVSVRLTL....A #=GC SS_cons XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-.........-HHHHHHHHHHHCT-....-EEEEEEETT.EEEEEE--B-HHHHHHHHHHHHHHS--EEEEEEEEE-X.............XXX-EEEEEEE.EE-X #=GC seq_cons hpplpthWpshssREppllsshushLhlslhYhslhpPhppttppspppltptppplshlpppusphpthp.ssssssstst.........uLpsllspoupptGl....slpRhpspGc.plpVtlcsssFssllsWLspLppppGlplpphclsct..............ssGhVslphhh..tts //