HMMER3/b [3.0 | March 2010] NAME Microvir_J ACC PF04726.8 DESC Microvirus J protein LENG 24 ALPH amino RF no CS yes MAP yes DATE Fri Oct 5 09:40:56 2012 NSEQ 3 EFFN 2.680664 CKSUM 3865231476 GA 19.00 19.00; TC 21.40 46.90; NC 17.80 16.80; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.7154 0.72021 STATS LOCAL VITERBI -6.8843 0.72021 STATS LOCAL FORWARD -3.9865 0.72021 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.76060 5.19657 3.88055 3.62588 3.15192 1.80378 4.46051 3.83020 2.05403 2.94058 4.42721 3.87036 3.69998 2.88992 2.14013 2.63561 3.52019 3.08195 3.33165 3.02475 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.00000 * 1 2.94655 5.02054 3.44716 2.90466 4.33091 3.74572 4.00026 3.71907 1.78113 3.33506 2.12606 3.37459 4.17450 3.17419 3.05494 1.50536 3.19729 3.41236 5.59225 4.30514 1 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 2 4.24887 6.01304 4.48538 4.02416 5.65291 4.49780 4.75530 5.19774 0.23425 4.57581 5.56585 4.36818 4.99529 3.95073 3.16914 4.27942 4.46471 4.87988 6.34906 5.37504 2 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 3 2.96705 5.16114 3.31682 2.94136 4.90426 1.42625 4.18423 4.35912 1.69184 3.89431 4.68673 3.40100 4.20240 3.33050 3.27871 1.74885 3.30491 3.88265 6.03911 4.71744 3 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 4 1.84318 4.86525 3.67146 3.11819 4.13490 3.85338 4.12948 1.94022 1.44613 3.09923 4.02297 3.55050 4.27407 3.35288 3.20395 3.13645 3.23615 3.00212 5.50968 4.25739 4 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 5 3.93322 5.92284 4.65449 3.63984 5.60629 4.41229 4.11357 4.82373 1.01914 4.11182 5.01987 3.91954 4.71348 3.23846 0.93822 3.89761 4.00388 4.52822 6.02145 4.99714 5 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 6 4.47434 6.04822 5.07377 4.49235 5.68192 4.63920 5.01744 5.39694 3.26587 4.73010 5.77188 4.74727 5.15890 4.25656 0.18082 4.56269 4.71668 5.08883 6.40608 5.50028 6 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 7 3.20106 4.91532 4.49395 4.19689 1.17806 3.96673 4.47522 3.80068 4.17351 3.36839 4.44281 4.22469 4.61255 4.37186 4.36551 1.03872 3.62004 3.53990 4.92597 3.30454 7 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 8 3.27219 5.15327 4.29448 4.24553 5.59170 0.55615 5.40490 5.20389 4.54043 4.81086 5.66225 4.35849 1.51659 4.76350 4.76640 3.45455 3.81458 4.46919 6.69659 5.72379 8 - X 2.68597 4.42384 2.77679 2.73282 3.46513 2.40400 3.72654 3.29513 2.67722 2.69333 4.24849 2.90506 2.73520 3.18010 2.89294 2.37914 2.77482 2.98678 4.58636 3.61662 0.44726 1.03062 5.56235 2.46379 0.08895 0.48576 0.95510 9 2.82464 4.76521 4.19271 4.12553 5.37130 0.66132 5.22820 4.91640 4.37927 4.57510 5.35407 4.08631 4.33287 4.55964 4.59964 1.45392 3.38692 4.09300 6.66856 5.53673 22 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 10 3.91187 5.91310 4.60010 3.61732 5.58677 4.39695 4.11304 4.81381 0.68460 4.10704 5.01254 3.90577 4.70302 3.23804 1.40816 3.87681 3.98896 4.51501 6.02031 4.98869 23 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 11 3.25099 5.27692 3.96983 3.44106 5.07259 3.89011 4.31067 4.52659 2.68064 4.01881 4.87743 3.76769 4.44416 3.47490 0.78192 1.70290 3.58196 4.08718 6.05319 4.86275 24 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 12 4.24887 6.01304 4.48538 4.02416 5.65291 4.49780 4.75530 5.19774 0.23425 4.57581 5.56585 4.36818 4.99529 3.95073 3.16914 4.27942 4.46471 4.87988 6.34906 5.37504 25 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 13 4.22507 5.80843 5.06367 5.10072 6.05350 0.09948 6.04988 5.98158 5.38830 5.45246 6.50035 5.23206 5.20471 5.64058 5.43020 4.43551 4.76432 5.33604 6.80878 6.21615 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 14 0.22954 4.99668 4.76931 4.71141 5.34028 3.78175 5.55873 4.66360 4.76229 4.47542 5.44557 4.52099 4.60588 5.00382 4.86356 3.36810 3.71098 4.10328 6.62356 5.60198 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 15 4.47434 6.04822 5.07377 4.49235 5.68192 4.63920 5.01744 5.39694 3.26587 4.73010 5.77188 4.74727 5.15890 4.25656 0.18082 4.56269 4.71668 5.08883 6.40608 5.50028 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 16 4.44300 5.66680 5.73710 5.46171 3.82482 5.20935 5.86246 3.13378 5.25826 0.22703 3.68469 5.67771 5.53789 5.36283 5.24375 5.05622 4.71602 3.39890 5.93933 4.86281 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 17 5.26281 6.21288 5.72119 5.69382 4.22271 4.99028 5.49784 5.49991 5.52194 4.68977 6.05586 5.73825 5.58501 5.83876 5.45012 5.47032 5.62504 5.39173 0.10608 4.19359 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 18 4.85127 5.94872 5.36708 5.32588 2.93652 5.03620 4.46535 4.79111 5.18775 3.98615 5.36091 5.06740 5.51583 5.22820 5.14187 4.86133 5.15477 4.70794 4.58920 0.20137 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 19 3.71179 5.09547 5.42213 5.19186 4.50196 4.70407 5.91137 2.49788 5.10054 3.06761 4.38700 5.22771 5.27119 5.42565 5.22035 4.34123 4.08389 0.31222 6.40049 5.17926 32 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 20 4.22507 5.80843 5.06367 5.10072 6.05350 0.09948 6.04988 5.98158 5.38830 5.45246 6.50035 5.23206 5.20471 5.64058 5.43020 4.43551 4.76432 5.33604 6.80878 6.21615 33 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 21 4.22507 5.80843 5.06367 5.10072 6.05350 0.09948 6.04988 5.98158 5.38830 5.45246 6.50035 5.23206 5.20471 5.64058 5.43020 4.43551 4.76432 5.33604 6.80878 6.21615 34 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 22 2.88685 5.06872 3.32041 2.88433 4.68436 3.61193 4.11157 4.12707 2.87540 3.69871 4.49710 3.35212 4.14429 1.45298 3.29675 1.76856 1.86746 3.69761 5.88712 4.55681 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 23 4.19263 5.96227 4.08515 3.95406 5.30159 4.39717 5.07425 5.22689 3.73349 4.59991 5.69710 4.38589 5.01738 0.22007 3.95271 4.24884 4.53680 4.90879 6.38602 5.24242 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01182 4.84000 5.56235 0.61958 0.77255 0.48576 0.95510 24 4.94380 5.84130 5.72750 5.69632 0.55892 5.38218 4.00389 4.47313 5.47121 3.59193 4.98858 4.91327 5.63563 5.09526 5.25008 4.80545 5.13709 4.44728 4.07436 1.29593 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00797 4.83616 * 0.61958 0.77255 0.00000 * //