# STOCKHOLM 1.0 #=GF ID DUF818 #=GF AC PF05677.7 #=GF DE Chlamydia CHLPS protein (DUF818) #=GF AU Moxon SJ #=GF SE Pfam-B_7510 (release 8.0) #=GF GA 19.70 19.70; #=GF TC 19.70 19.70; #=GF NC 19.60 19.60; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF WK Domain_of_unknown_function #=GF DR INTERPRO; IPR008536; #=GF CC This family consists of several Chlamydia CHLPS proteins, the #=GF CC function of which are unknown. #=GF SQ 5 #=GS P94660_CHLCI/12-372 AC P94660.1 #=GS Q9JS10_CHLPN/11-372 AC Q9JS10.1 #=GS Q9Z6X9_CHLPN/13-370 AC Q9Z6X9.1 #=GS Q9JRV1_CHLPN/12-369 AC Q9JRV1.1 #=GS Q9K1U7_CHLPN/1-363 AC Q9K1U7.1 P94660_CHLCI/12-372 NSLITMNPQPEILIFSSEAARQAHRRRTLYPVIYKILDVICEIIKCIFRIILFIPFGLLWVLGKICQNCLLPAAGGLFTE.QLCFA....KKILQESFRCYVDDWLESGYASSVKRIPIQCDDLLIDAISIQFPDAEKDRWMLVSLGNSECFETRAMVYSRND...WILNVAKQARANVVVFNYPGVMHSKGPITRESLGKAYQACVHYLRDHPDGPKAKQIIAYGYSLGTLVQALGLSKEVVDGSDGVDWFVIKDRGPRSVAAIASQWLGKVAGWTATQLGWEINSAKYSESLVCPELFIHGEDY.QAQLIGD.GMFNRDNCFAAPFLDP.NAPKFPGKKIPVGEFLLQHKGELDETTIQNVVKHIIDHYS Q9JS10_CHLPN/11-372 AAILDMHPKPSIAMFSSEQARTSWEKRQAHPYLYRLLEIIWGVVKFLLGLIFFIPLGLFWVLQKICQNFILLGAGGWIFR.PICRD....SNLLRQAYAARLFSASFQDHVSSVRRVCLQYDEVFIDGLELRLPNAKPDRWMLISNGNSDCLEYRTVLQGEKD...WIFRIAEESQSNILIFNYPGVMKSQGNITRNNVVKSYQACVRYLRDEPAGPQARQIVAYGYSLGASVQAEALSKEIADGSDSVRWFVVKDRGARSTGAVAKQFIGSLGVWLANLTHWNINSEKRSKDLHCPELFIYGKDS.QGNLIGD.GLFKKETCFAAPFLDPKNLEECSGKKIPVAQTGLRHDHILSDDVIKEVAGHIRRHFD Q9Z6X9_CHLPN/13-370 DTILETDPKPSLIMFSSKKTEIASERRKAHPTLFKVLGTIWNIVKFIISIILFLPLALLWVLKKTCQFFILPSSI..ISQ.SMS...KTAVAIRRMTFLSHIKQLLSLKEISAADRVVIQYDDLVVDSLAIKIPHALPHRWILYSQGNSGLMEN..LFDRGDS...SLHQLAKATGSNLLVFNYPGIMSSKGEAKRENLVKSYQACVRYLRDEETGPKANQIIAFGYSLGTSVQAAALDREVTDGSDGTSWIVVKDRGPRSLADVANQICKPIASAIIKLVGWNIDSVKPSERLRCPEIFIYNSNH.DQELISD.GLFERENCVATPFLELPEV.KTSGTKIPIPERDLLHLNPLSPNVVDRLAAVISNYLD Q9JRV1_CHLPN/12-369 EDILHSHPSPQATYFSSTRAQKLHEFKDRHPVLTRIASVIIKIFKVLIGLII.LPLGIYWLCQTLCTNSILPSKNLLKIF.....KKQPNTKTLKTNYLRALQDYSSKNRVASMRRVPILQDNVLIDTLEICLSQAPTNRWMLISLGSDCSLEEIAC....KEIFDSWQRFAKLIGANILVYNYPGVMSSTGSSSLKDLASAHNICTRYLKDKEQGPGAKEIITYGYSLGGLIQAEALRDQKIVANDDTTWIAVKDRCPLFISPEGFHSCRRIGKLVARLFGWGTKAVERSQDLPCLEIFLYPTDSLRRSTVRQNKLLAPELTLAHAIKNSPYVQ....NKEFIEVRLSSDIDPIDSKTRVALATPILKKLS Q9K1U7_CHLPN/1-363 MSGIFSNPHP.VSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLII.PPLGIYWLCQLVCSLALFPRSSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLED..MIGLKDSLFLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQSAALQKNPFTNSE.TSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDTALLPEFTLAHAIKRTPFA....RSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLS #=GC seq_cons soILcocP+PplshFSSc+A+puaE+RctHPlLaKILslIhcIlKhLIGLIlFlPLGLaWVLQKlCQNsILPuuuhLhop.phChc....splL+psFlspLcshhppscVSSs+RVsIQpD-LlIDoLuI+lPsAcPcRWMLISLGNS-sLEshshlttcc-...SlpclAKtsGANILVFNYPGVMSSpGsloRENLuKAYQACVRYLRD+.sGPpA+QIIAYGYSLGulVQAtALsKElsDGSDuToWlVVKDRGPRSluAlAsQahGsIGshlAsLsGWsIcSsKpSc-LsCPEIFIYusDp.cssLIGD.GLFp+EsClAsPFL-sPpl.chsGsKIPIuEpsLpHpsPLccsTIpcLAssIlc+LS //