HMMER3/b [3.0 | March 2010] NAME Desulfoferrod_N ACC PF06397.7 DESC Desulfoferrodoxin, N-terminal domain LENG 36 ALPH amino RF no CS yes MAP yes DATE Sun Oct 7 07:38:15 2012 NSEQ 8 EFFN 2.128906 CKSUM 3842431852 GA 21.80 21.80; TC 21.80 21.90; NC 21.70 21.70; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.8406 0.71963 STATS LOCAL VITERBI -7.9472 0.71963 STATS LOCAL FORWARD -4.5644 0.71963 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.94418 2.32057 3.34681 2.69697 3.93098 2.24699 3.84554 2.92007 2.85876 2.51572 3.20355 3.06037 3.55093 3.22000 3.41463 3.25951 3.14178 2.24989 5.59836 3.57612 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.00000 * 1 1.57193 4.59655 3.84770 3.40685 4.62361 3.37936 4.46998 4.04649 3.40192 3.70319 4.51172 3.63258 1.74664 3.70120 3.76629 2.01763 1.81090 3.52926 5.94495 4.71237 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 2 2.35776 5.30614 3.00880 1.72795 4.65167 3.56800 3.75789 4.12382 2.14656 3.60209 4.35470 2.12767 3.97331 2.86180 2.35788 2.79093 3.05802 3.69872 5.72954 4.33700 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 3 2.75637 4.91609 3.18343 2.19818 4.14393 3.59629 2.96221 2.78592 2.19386 3.16906 3.07407 3.13792 3.98513 2.96016 2.61497 2.80222 2.46663 2.70570 5.42544 4.10067 3 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 4 2.76035 4.51864 3.59869 3.04568 3.68392 2.20224 4.00025 3.03784 2.99942 1.84352 2.85579 2.65293 4.11153 3.31329 3.36022 2.96717 2.44236 2.80600 5.12103 3.88163 4 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 5 3.19719 5.81249 1.96823 1.41824 5.11453 3.57980 4.03285 4.63965 2.96050 4.09964 4.90469 3.02831 4.15164 1.42288 3.52517 3.08980 3.46544 4.18862 6.23593 4.74046 5 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 6 3.16607 4.58193 4.60732 4.05564 3.82733 4.36754 4.75432 1.81886 2.53896 2.59757 3.71105 4.31820 4.71652 4.19685 4.04594 3.69758 3.41356 0.89890 5.51012 4.29881 6 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 7 4.69022 5.65297 5.49792 5.41402 1.69087 5.17739 3.87015 4.25772 5.20334 3.41412 4.79158 4.73686 5.44521 4.90090 5.03557 4.59755 4.89264 4.22101 3.94854 0.46446 7 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 8 3.71234 5.75043 4.32701 3.42112 5.38207 4.22684 3.98456 4.63663 0.76988 3.95397 4.84978 3.73647 4.54418 3.10975 1.43316 3.68085 3.80878 4.32963 5.88725 4.82878 8 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 9 3.81994 0.16968 5.36949 5.31943 5.25929 4.21167 5.81704 4.64862 5.20420 4.46638 5.62927 5.14791 4.95815 5.51291 5.16411 4.08562 4.34878 4.30956 6.39603 5.51981 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 10 2.76863 5.00692 3.11816 1.71203 4.26432 3.57963 3.79306 3.67164 2.58250 3.27418 3.09715 2.17380 3.97782 2.93550 3.04860 2.79195 2.53040 2.75203 5.50980 4.16506 10 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 11 2.95919 4.36508 4.59594 4.01330 3.42630 4.13066 2.42690 1.69668 3.85848 1.91369 3.40370 4.16884 4.47742 4.06617 3.99338 3.43762 3.19368 1.50638 5.03898 3.84314 11 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 12 3.81994 0.16968 5.36949 5.31943 5.25929 4.21167 5.81704 4.64862 5.20420 4.46638 5.62927 5.14791 4.95815 5.51291 5.16411 4.08562 4.34878 4.30956 6.39603 5.51981 12 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 13 3.92000 5.54775 4.73966 4.75693 5.75851 0.13891 5.75024 5.62195 5.03384 5.13444 6.16309 4.90761 4.94863 5.29696 5.11734 4.12306 4.45368 5.00024 6.57820 5.90861 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 14 3.28760 5.60844 2.82056 2.70438 4.95079 3.67853 4.16569 4.58684 2.94013 4.07544 4.94556 0.80625 4.27592 2.22771 3.33442 3.23828 3.58738 4.16967 6.11473 4.69953 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 15 3.21573 4.61779 4.57577 2.58954 3.86509 4.43951 4.86539 0.93800 4.00722 2.57758 3.72722 4.37705 4.78478 4.30114 4.25397 3.77805 3.46576 1.63154 5.60162 4.38615 15 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 16 3.52652 4.92655 5.19696 4.94239 4.29727 4.52705 5.66398 2.35464 4.83778 2.87829 4.19009 5.00060 5.08740 5.16624 4.97235 4.13236 3.89416 0.38935 6.18692 4.95419 16 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 17 2.82339 5.15338 3.06034 1.43687 4.45502 3.58529 3.79975 3.86645 2.11092 3.43734 4.22968 3.08971 3.99614 2.92602 2.99394 2.81920 2.48459 2.63633 5.63290 4.27100 17 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 18 3.56839 4.78933 5.59339 5.14946 4.14272 5.11944 5.92025 1.58469 5.07568 2.56746 3.88572 5.30662 5.38525 5.34936 5.25229 4.56771 3.84113 0.57790 6.26405 5.03104 18 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 19 3.22388 4.59636 4.91947 4.33764 3.41200 4.42382 4.77073 2.47154 4.18859 0.95511 2.51960 4.49554 4.71997 4.33148 4.29083 3.74684 2.41241 2.04314 5.23271 4.11326 19 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 20 3.12717 5.63685 2.69257 1.60866 4.90807 3.60216 1.60468 4.44589 2.81536 3.92730 4.73204 1.96132 4.13402 3.12168 3.30870 3.04886 3.38315 4.02568 6.04420 4.59563 20 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 21 2.05738 4.92208 3.17841 2.17402 4.26880 2.37146 3.88136 3.67910 2.70030 3.29420 4.11040 3.17532 2.33524 3.04042 3.15831 2.81187 3.02573 2.53269 5.54132 4.21320 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 22 3.92000 5.54775 4.73966 4.75693 5.75851 0.13891 5.75024 5.62195 5.03384 5.13444 6.16309 4.90761 4.94863 5.29696 5.11734 4.12306 4.45368 5.00024 6.57820 5.90861 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 23 2.19920 4.68432 3.54346 3.02467 4.08022 1.35640 4.07334 2.67370 2.92518 3.12523 3.99298 3.42944 4.09724 3.30790 2.58292 2.90614 3.06540 3.12761 5.44348 4.18572 23 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 24 1.97966 4.64725 4.13469 4.06239 5.18639 0.52419 5.11969 4.63503 4.26806 4.35339 5.17196 4.00425 4.22753 4.46821 4.46738 2.92430 3.28534 3.90214 6.48332 5.38254 24 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 25 2.34923 5.31349 2.46370 1.91903 4.64150 3.54127 3.78031 4.12078 2.54999 3.61369 4.36879 3.01273 3.96879 2.08715 3.04916 2.78878 2.03644 3.69672 5.75874 4.34649 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 26 4.19174 5.45272 5.47134 5.17475 3.65872 4.99441 5.60770 2.94833 4.95587 0.28887 3.53495 5.39213 5.33352 5.11132 4.97664 4.77239 4.46722 3.17787 5.74838 4.63802 26 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 27 3.52652 4.92655 5.19696 4.94239 4.29727 4.52705 5.66398 2.35464 4.83778 2.87829 4.19009 5.00060 5.08740 5.16624 4.97235 4.13236 3.89416 0.38935 6.18692 4.95419 27 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 28 3.81994 0.16968 5.36949 5.31943 5.25929 4.21167 5.81704 4.64862 5.20420 4.46638 5.62927 5.14791 4.95815 5.51291 5.16411 4.08562 4.34878 4.30956 6.39603 5.51981 28 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 29 3.81994 0.16968 5.36949 5.31943 5.25929 4.21167 5.81704 4.64862 5.20420 4.46638 5.62927 5.14791 4.95815 5.51291 5.16411 4.08562 4.34878 4.30956 6.39603 5.51981 29 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 30 3.04540 5.08930 3.21098 3.16745 5.16174 0.73631 4.63853 4.76806 3.66041 4.35241 5.19894 1.77728 4.29904 3.88087 4.07008 3.14061 3.51514 4.15199 6.38450 5.09520 30 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 31 3.07492 5.54475 2.91788 1.32582 4.90759 3.65703 3.89356 4.36846 2.07497 3.82169 4.61117 3.12122 4.11988 1.74235 2.93935 3.01365 3.30456 3.95255 5.92362 4.55014 31 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 32 3.44700 5.75546 1.22164 2.75725 5.32418 3.70366 4.43075 4.91588 3.51961 4.43053 5.32353 3.32078 1.03064 3.63215 4.09877 3.38646 3.80065 4.44485 6.47015 5.08005 32 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 33 3.85024 5.29818 5.06481 4.79311 3.88254 4.54423 5.34632 3.16124 4.51869 2.40976 0.40379 4.95333 5.06365 4.86819 4.61413 4.24623 4.20163 3.25124 5.77236 4.59267 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 34 2.82191 5.16361 3.09185 1.89492 4.47173 3.59180 3.78604 3.89021 1.59684 3.44652 4.23396 3.09209 3.99378 2.90826 2.94358 2.81519 2.42829 2.64042 5.63015 4.27114 34 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 35 2.88973 4.51977 3.88868 3.31863 2.68158 3.88129 2.91185 2.96528 2.38560 1.29192 3.57875 3.66381 4.25136 3.49773 3.41704 3.15196 3.11766 2.77789 4.91987 3.58628 35 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01403 4.66929 5.39164 0.61958 0.77255 0.48576 0.95510 36 3.21497 4.63076 4.71985 4.13251 3.36018 4.36749 4.65534 2.03900 3.97802 1.39665 1.57011 4.35785 4.65614 2.60649 4.12638 3.67278 3.43837 2.64108 5.17929 4.06271 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00947 4.66473 * 0.61958 0.77255 0.00000 * //