HMMER3/b [3.0 | March 2010] NAME Curlin_rpt ACC PF07012.7 DESC Curlin associated repeat LENG 34 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 04:08:41 2012 NSEQ 22 EFFN 18.742432 CKSUM 1497503824 GA 20.70 20.70; TC 21.10 20.70; NC 20.40 20.60; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.4236 0.71971 STATS LOCAL VITERBI -7.4620 0.71971 STATS LOCAL FORWARD -4.2269 0.71971 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.52918 6.04036 2.51635 3.18936 4.06881 1.98040 4.46691 2.85103 3.36653 2.83757 4.59433 2.14485 4.81131 2.46041 3.75757 2.48476 2.72964 2.79802 5.53761 3.86519 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.00000 * 1 2.27492 6.23387 6.78128 6.85343 7.24266 0.20033 7.33998 6.78599 6.81971 6.47508 7.17744 5.98857 5.92154 6.81069 6.71731 2.99603 4.92272 5.73185 8.57209 7.61577 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 2 3.95989 6.48781 1.14006 3.03219 5.82959 4.67575 3.21096 5.32125 3.66215 4.79140 5.53311 2.19000 2.76512 2.87594 3.15969 3.91241 1.56246 4.87741 6.91810 5.49590 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 3 1.72453 7.28729 1.04085 4.05063 6.85119 5.09295 5.72140 6.40083 4.74320 5.86045 6.68558 1.17387 5.74044 4.88289 3.21926 2.90292 5.10345 5.87919 7.99609 6.47797 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 4 4.52578 6.48524 5.39256 5.44351 6.76197 5.13574 6.73576 6.63558 5.93547 3.02966 7.08645 0.36514 5.97959 6.10154 6.18573 1.57996 5.09067 5.81638 8.16778 6.82147 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 5 3.05779 6.31998 1.71817 2.16097 5.64996 4.61148 4.80800 5.12656 3.55331 2.29273 5.36583 2.80068 5.00999 3.91028 4.04529 1.64922 2.11068 4.70274 6.76185 2.71523 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 6 1.90637 5.60917 6.26762 5.68109 4.78736 1.69696 5.89997 1.94759 5.48778 2.19053 4.76277 5.67311 5.85001 5.63434 5.51256 4.82003 2.43013 1.33286 6.38295 5.20043 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 7 2.72425 6.32769 1.25322 2.57256 5.67393 3.33801 4.77414 5.16082 3.50864 4.63348 3.53076 2.61654 4.98056 2.58803 2.41446 1.95476 3.04323 4.71897 6.75965 5.34785 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 8 5.22440 6.36918 7.42017 6.99862 5.73748 7.02093 7.97575 0.82125 7.01042 1.27699 5.40568 7.19753 7.14931 7.26207 7.20260 6.51490 3.17433 1.53640 8.07693 6.87732 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 9 3.89313 5.67544 4.67962 4.11368 4.82239 4.84751 5.09084 3.08773 1.88403 2.56912 4.77522 3.23117 5.22855 4.38744 2.60339 2.29500 1.47123 2.47619 6.24844 2.32112 9 - - 2.68629 4.42236 2.77530 2.73134 3.46365 2.40401 3.72505 3.29365 2.67752 2.69366 4.24701 2.90358 2.73750 3.18157 2.89812 2.37898 2.77530 2.98529 4.58488 3.61514 0.06036 2.84925 7.27945 0.10037 2.34862 0.48576 0.95510 10 6.30213 7.96350 5.84650 5.78083 6.66357 6.28173 3.07306 7.53826 5.42457 6.74432 7.85186 6.20750 6.89784 0.07971 5.60226 6.28966 6.60851 7.16442 7.88982 6.52513 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 11 3.81328 6.31336 2.72639 2.47684 3.54653 3.33270 4.77622 5.13683 2.76090 3.27820 3.38037 2.58298 4.98207 2.56671 2.44123 2.40204 3.16679 2.50840 6.74871 1.88806 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 12 2.94186 6.24143 6.79429 6.86433 7.24563 0.13975 7.34439 6.78319 6.81503 6.47599 7.18163 5.99750 5.92892 6.81579 6.71371 4.54662 3.08586 5.73610 8.57105 7.61839 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 13 2.98745 6.33835 1.66908 2.85999 2.78852 1.75550 4.80993 5.15445 3.55405 4.64019 5.38346 1.79233 5.01197 3.91062 4.04736 2.19574 3.14613 4.72430 6.77741 3.32483 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 14 1.76949 6.32380 3.17389 3.50531 5.66915 2.31903 4.77322 5.15531 2.40855 3.28175 5.36440 1.94729 4.97968 3.00297 2.56988 2.16496 2.62911 4.71459 3.46331 5.34521 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 15 4.68815 6.88125 4.49032 4.25355 6.11103 5.20833 2.54008 5.67969 4.14838 2.57556 6.07628 0.42445 5.72649 2.95138 4.46762 4.67743 3.17880 5.33937 7.29379 5.94078 16 - - 2.68111 4.42402 2.77696 2.73300 3.46531 2.40295 3.72671 3.28903 2.67917 2.69187 4.24866 2.90523 2.73916 3.17762 2.89977 2.38063 2.77499 2.98452 4.58654 3.61680 0.20336 1.69648 7.27945 1.57626 0.23161 0.48576 0.95510 16 2.98970 6.27846 2.73000 2.36538 2.79006 4.59780 4.78707 5.07580 2.84505 1.67592 5.32440 2.61634 4.99081 3.07218 4.01926 1.71508 2.97723 2.63996 6.72324 5.32460 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 17 0.71393 6.24276 2.14041 5.41755 6.76139 2.51896 6.49241 6.24874 5.51158 5.88186 6.63615 5.47055 5.77318 5.74275 5.83055 1.59261 3.21817 3.35944 8.04538 6.86327 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 18 2.15523 5.33459 5.92892 5.31326 3.04256 3.22538 5.46415 2.97990 5.09703 1.16818 4.45360 5.29429 5.49392 5.22732 5.10349 2.66404 2.14331 2.38538 5.95652 2.31878 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 19 2.56741 5.41386 6.02991 5.42072 2.95563 3.44076 5.58464 1.10989 5.20921 2.79679 4.54062 5.40346 5.59650 5.34268 5.21865 2.20445 4.28309 1.32764 6.07307 4.89561 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 20 1.64839 5.68729 2.11362 3.08701 3.36047 1.70441 5.07835 3.05629 4.05174 2.16462 4.78614 4.52288 5.21782 4.36625 4.43481 2.54691 3.07712 3.96824 6.25833 3.18635 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 21 2.16351 6.39363 2.69620 3.73864 5.70496 4.76820 5.04948 3.33167 3.85443 4.70212 5.49568 2.18633 5.21302 0.70113 4.34419 4.04337 4.29903 3.19586 6.90502 5.52496 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 22 2.62449 5.35632 5.75449 2.21654 3.09201 5.10512 5.42972 1.88836 3.21790 2.74153 4.47424 5.21199 5.47050 5.13133 5.03550 2.29069 2.06961 2.07680 2.75046 3.01943 29 - - 2.68551 4.42283 2.77355 2.73181 3.46412 2.40571 3.72552 3.29412 2.67799 2.69413 4.24748 2.90139 2.73797 3.17909 2.89700 2.37945 2.77577 2.98576 4.58535 3.61561 0.35418 1.21213 7.27945 0.02211 3.82264 0.48576 0.95510 23 2.16484 6.54469 6.88012 6.95642 7.46953 0.15575 7.53877 7.08112 7.01785 6.73115 7.48123 6.27403 6.19755 7.04575 6.92623 4.88274 5.26387 6.05978 8.62851 7.81058 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 24 2.72405 6.31994 2.72572 3.50750 5.66349 3.10893 4.77462 5.14833 2.43761 3.24127 3.50614 1.42604 4.98084 3.87148 2.61867 1.57535 2.89113 4.70977 6.75359 5.34362 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 25 5.09077 7.89178 1.21688 2.37930 7.14054 3.13887 5.81789 6.73709 3.18730 6.15804 7.04710 0.87447 5.86345 4.99480 5.68639 2.60236 5.40120 6.24460 8.30100 6.67385 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 26 4.76078 6.83045 4.69677 4.67704 6.08082 5.22820 3.18456 6.33086 5.06068 3.03189 6.75563 0.36310 5.95417 5.38546 5.41944 1.91977 5.20380 5.79240 7.52475 5.98155 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 27 3.81504 6.30249 1.26612 2.22728 3.54394 4.59225 4.78036 5.11712 2.80249 3.24887 3.18326 4.06348 4.98557 3.87988 2.54866 2.29159 1.87815 4.68795 6.74094 5.33593 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 28 1.02955 5.53361 6.18356 5.58196 2.96707 5.40491 5.76571 1.75281 5.37798 2.89613 3.13134 5.57231 5.75386 5.51334 5.39100 4.72618 2.54940 1.68010 6.24130 5.06424 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 29 3.81323 6.31700 2.47129 2.81166 2.87151 2.92424 4.77541 2.60231 2.40950 4.62105 5.35843 2.68894 4.98144 3.00413 4.00360 1.75531 1.72633 4.70608 6.75143 3.48606 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 30 5.33408 6.46361 7.52707 7.10299 5.61093 7.16024 8.09011 1.19811 7.12456 1.97285 3.09891 7.33817 7.21895 7.28173 7.28266 6.67283 5.58865 0.70987 8.02719 6.91677 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 31 4.03377 6.57087 2.51084 1.56147 5.91045 2.20628 4.96959 5.40560 2.23051 4.87446 5.62000 3.08352 5.15567 4.07476 4.25362 2.32536 1.36797 4.95993 7.00185 5.57247 39 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 32 5.00132 6.93411 5.52211 5.54943 7.22978 5.49419 6.83439 7.12579 5.69470 6.61310 7.49550 5.79740 6.29555 0.10164 5.90948 2.90522 5.53767 6.30832 8.35511 7.19025 40 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 33 2.49576 6.25269 2.32027 2.40423 3.36014 4.60457 3.36029 2.05501 2.15881 2.48734 5.30155 4.08495 4.99726 2.86563 4.03011 2.58403 2.68217 4.62671 6.70422 2.76887 41 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00211 6.55711 7.27945 0.61958 0.77255 0.48576 0.95510 34 7.21004 8.19833 7.75981 7.85029 8.45207 0.00632 8.43446 8.76929 8.06997 7.90685 9.16898 8.04126 7.48471 8.33945 7.85009 7.51115 7.70841 8.21825 8.80168 8.69477 42 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00142 6.55642 * 0.61958 0.77255 0.00000 * //