HMMER3/b [3.0 | March 2010] NAME Pericardin_rpt ACC PF07054.6 DESC Pericardin like repeat LENG 34 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 11:44:39 2012 NSEQ 5 EFFN 1.411133 CKSUM 2532912602 GA 21.20 21.20; TC 22.50 21.20; NC 20.00 20.80; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -8.0969 0.71971 STATS LOCAL VITERBI -7.9488 0.71971 STATS LOCAL FORWARD -4.0463 0.71971 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.50928 4.81729 3.83547 3.60535 4.22700 1.34409 4.56536 3.26284 3.51436 3.49205 4.60955 3.75479 2.45383 2.23423 3.56949 2.82440 2.77667 2.97291 5.61851 3.06598 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.00000 * 1 3.43938 5.36750 3.38862 3.18613 4.60771 3.81039 4.33596 4.35921 2.97669 3.80250 4.84841 3.63821 4.39148 0.53463 3.23551 3.48042 3.75157 4.06398 5.79268 4.54282 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 2 3.59036 5.22590 4.25560 4.18862 5.09149 3.88591 5.19275 4.81117 4.29844 4.36161 5.45262 4.43055 0.25625 4.66785 4.45609 3.78031 4.07570 4.38876 6.09819 5.22808 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 3 2.49557 4.45014 3.60006 3.46790 4.81676 0.86373 4.63659 4.32597 3.68730 3.98781 4.79552 3.59082 3.96153 3.92759 3.97727 1.75153 3.02357 3.63753 6.12377 4.92686 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 4 4.08075 5.35493 4.64894 4.50039 2.51214 4.46948 3.98987 4.03243 4.34845 3.34442 4.65415 4.42179 4.94216 4.51874 4.41212 4.15278 4.37595 3.93005 4.16636 0.40712 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 5 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 6 2.45429 4.39909 3.74157 3.46371 4.59749 3.17221 4.51576 3.99284 3.49008 3.70886 4.54174 3.57843 3.93641 3.79185 3.78418 0.86327 1.95702 3.42674 5.94179 4.72965 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 7 3.43938 5.36750 3.38862 3.18613 4.60771 3.81039 4.33596 4.35921 2.97669 3.80250 4.84841 3.63821 4.39148 0.53463 3.23551 3.48042 3.75157 4.06398 5.79268 4.54282 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 8 2.66911 4.49769 3.59796 3.12947 3.85309 3.51250 4.11767 3.09607 3.04639 2.14779 3.79846 3.47437 1.56633 3.40545 3.37872 2.86513 2.24841 2.85218 5.31987 4.07580 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 9 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 10 3.37129 4.60776 5.32862 4.85847 3.90602 4.88319 5.58149 1.19410 4.77432 2.35834 3.66588 5.03035 5.14781 5.03124 4.94780 4.30611 3.63705 0.90869 5.96868 4.75348 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 11 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 12 1.34037 4.35729 3.82118 3.48571 4.55343 1.55565 4.50319 3.94340 3.51060 3.64843 4.46533 3.58126 3.91437 3.78009 3.81662 2.60486 1.95796 3.38125 5.89976 4.70696 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 13 3.43938 5.36750 3.38862 3.18613 4.60771 3.81039 4.33596 4.35921 2.97669 3.80250 4.84841 3.63821 4.39148 0.53463 3.23551 3.48042 3.75157 4.06398 5.79268 4.54282 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 14 1.95625 4.57570 3.32378 2.95393 4.36740 3.30071 4.12778 3.74287 3.01349 3.42337 4.25562 2.20292 3.93524 3.33821 3.40675 2.69507 1.35979 3.31342 5.68118 4.40746 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 15 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 16 1.08669 4.35174 3.83920 3.49869 4.53134 2.00524 4.50429 3.91599 3.51616 3.62598 4.44625 3.58820 3.91583 3.78573 3.81850 2.60657 1.95879 3.36373 5.88312 4.69187 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 17 2.95683 4.93222 3.50320 3.16316 4.70615 0.91357 4.23627 4.20044 2.85363 3.76740 4.63546 3.53090 4.16796 3.44424 1.94371 3.06001 3.32999 3.76410 5.81952 4.63718 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 18 3.43938 5.36750 3.38862 3.18613 4.60771 3.81039 4.33596 4.35921 2.97669 3.80250 4.84841 3.63821 4.39148 0.53463 3.23551 3.48042 3.75157 4.06398 5.79268 4.54282 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 19 3.59036 5.22590 4.25560 4.18862 5.09149 3.88591 5.19275 4.81117 4.29844 4.36161 5.45262 4.43055 0.25625 4.66785 4.45609 3.78031 4.07570 4.38876 6.09819 5.22808 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 20 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 21 4.08075 5.35493 4.64894 4.50039 2.51214 4.46948 3.98987 4.03243 4.34845 3.34442 4.65415 4.42179 4.94216 4.51874 4.41212 4.15278 4.37595 3.93005 4.16636 0.40712 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 22 2.60110 4.45117 3.88966 3.62647 4.31955 0.92875 4.59363 3.42774 3.64043 3.36151 4.32590 3.73728 4.07003 3.93963 3.89692 2.81810 3.07663 1.95286 5.76661 4.55462 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 23 1.39173 4.35794 3.82758 3.44272 4.44716 3.18059 4.43956 3.82304 3.43207 3.53541 4.36266 3.56517 3.91685 3.71557 3.74555 1.90694 1.47231 3.30924 5.80471 4.60336 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 24 3.18151 5.34136 3.44874 2.89472 4.73802 3.78461 3.82252 4.17069 2.16847 3.60683 4.47846 3.32828 4.18841 1.14880 1.80896 3.17189 3.37355 3.83785 5.65332 4.43490 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 25 3.59036 5.22590 4.25560 4.18862 5.09149 3.88591 5.19275 4.81117 4.29844 4.36161 5.45262 4.43055 0.25625 4.66785 4.45609 3.78031 4.07570 4.38876 6.09819 5.22808 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 26 2.60179 4.45032 3.89128 3.62641 4.31368 0.93773 4.59202 3.41663 3.63949 3.35391 4.31904 3.73787 4.07098 3.93856 3.89603 2.81950 3.07635 1.93354 5.76224 4.55022 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 27 3.37791 4.61342 5.33584 4.86571 3.89382 4.89008 5.58542 0.98263 4.78054 2.33889 3.65288 5.03797 5.15143 5.03311 4.95127 4.31371 3.64323 1.10833 5.96332 4.75269 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 28 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 29 1.27976 4.39536 3.81727 3.63353 4.75774 1.09382 4.69172 4.16294 3.75920 3.88390 4.70802 3.66927 3.95906 4.00033 4.01977 2.65602 2.99471 3.52819 6.08426 4.92701 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 30 3.43938 5.36750 3.38862 3.18613 4.60771 3.81039 4.33596 4.35921 2.97669 3.80250 4.84841 3.63821 4.39148 0.53463 3.23551 3.48042 3.75157 4.06398 5.79268 4.54282 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 31 2.46444 4.39168 3.76568 3.48479 4.51842 3.18930 4.51074 3.88360 3.49282 3.62345 4.47248 3.59431 3.94749 3.80093 3.77598 1.83951 0.91937 3.36091 5.88213 4.67263 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 32 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 33 1.07360 4.43982 4.17905 3.75084 3.84494 3.69899 4.57712 1.86312 3.65903 2.63765 3.76062 3.92949 4.28748 3.96380 3.91015 3.10876 3.15249 2.32704 5.49139 4.27433 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01856 4.39202 5.11436 0.61958 0.77255 0.48576 0.95510 34 3.43816 5.13017 4.21409 4.19155 5.26431 0.24432 5.24636 5.02302 4.44067 4.59612 5.59783 4.38120 4.53302 4.72455 4.58925 3.62934 3.95760 4.45037 6.19031 5.39424 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01253 4.38599 * 0.61958 0.77255 0.00000 * //