HMMER3/b [3.0 | March 2010] NAME IlvGEDA_leader ACC PF08046.6 DESC IlvGEDA operon leader peptide LENG 32 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 20:09:40 2012 NSEQ 2 EFFN 1.550781 CKSUM 1657352774 GA 25.00 25.00; TC 49.30 49.30; NC 17.90 17.40; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.3145 0.71976 STATS LOCAL VITERBI -7.5851 0.71976 STATS LOCAL FORWARD -4.7964 0.71976 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.32711 3.48185 4.26050 3.99735 4.09121 2.69964 4.88738 1.95081 3.09315 2.11056 3.38347 3.87213 2.82596 3.42833 3.13548 2.86654 3.63912 1.87712 5.77466 4.62608 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.00000 * 1 3.55345 5.02644 4.75216 4.43026 3.62647 4.32143 5.03146 2.87046 4.16203 2.16269 0.58344 4.62450 4.81651 4.51933 4.29039 3.94426 3.88727 2.93879 5.51758 4.32016 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 2 2.89754 5.07183 3.19607 2.77760 4.64581 3.55366 3.91856 4.08019 1.37424 3.61408 4.44125 3.23513 4.06430 3.06753 2.80313 1.49844 3.18849 3.67518 5.73461 4.44535 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 3 1.41814 4.53376 4.22953 3.79252 3.64619 3.82032 4.55870 2.68153 3.66677 1.26188 3.56707 3.99472 4.36064 3.96873 3.89391 3.22339 3.24539 2.56788 5.36341 4.16472 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 4 3.62619 4.86635 5.45568 4.92899 3.41913 5.02294 5.42070 1.18268 4.77627 1.00318 3.19226 5.13559 5.16153 4.84439 4.83841 4.42605 3.85732 2.18471 5.58174 4.51155 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 5 3.42901 4.72719 5.19981 4.69259 3.53026 4.74762 5.24181 2.10568 4.54008 1.11298 3.33714 4.87410 5.00829 4.71028 4.65624 4.14386 3.68348 1.15586 5.57521 4.43673 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 6 3.52740 5.43943 3.46786 3.27401 4.69017 3.87916 4.42110 4.46163 3.06182 3.89659 4.94812 3.72387 4.46538 0.47823 3.31598 3.56944 3.84314 4.16381 5.86381 4.62464 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 7 3.30802 4.73421 4.90834 4.62380 4.05884 4.30597 5.35458 2.20928 4.50651 2.66368 3.96489 4.71532 4.85992 4.83999 4.66110 3.87513 3.67074 0.51036 5.92763 4.68446 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 8 3.52549 4.83071 5.09945 4.76681 3.84329 4.65463 5.42740 0.55585 4.61216 2.34536 3.72427 4.94099 5.06370 4.92239 4.74966 4.24186 3.82673 2.03574 5.82753 4.59676 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 9 2.73535 4.83873 3.01226 2.82911 4.69401 3.34024 4.19567 4.23992 3.09938 3.83255 4.65321 1.41379 4.01469 3.39501 3.52144 1.33000 3.15041 3.71343 5.95853 4.60511 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 10 3.88228 5.19292 5.12372 4.80167 3.47250 4.71677 5.28586 2.73614 4.57119 0.39161 3.37474 5.02769 5.07495 4.79027 4.63738 4.41765 4.16108 2.91674 5.52007 4.36632 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 11 3.30802 4.73421 4.90834 4.62380 4.05884 4.30597 5.35458 2.20928 4.50651 2.66368 3.96489 4.71532 4.85992 4.83999 4.66110 3.87513 3.67074 0.51036 5.92763 4.68446 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 12 3.42901 4.72719 5.19981 4.69259 3.53026 4.74762 5.24181 2.10568 4.54008 1.11298 3.33714 4.87410 5.00829 4.71028 4.65624 4.14386 3.68348 1.15586 5.57521 4.43673 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 13 3.52549 4.83071 5.09945 4.76681 3.84329 4.65463 5.42740 0.55585 4.61216 2.34536 3.72427 4.94099 5.06370 4.92239 4.74966 4.24186 3.82673 2.03574 5.82753 4.59676 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 14 2.71361 4.62223 3.84436 3.72856 4.73842 3.34772 4.79624 4.36383 3.84695 4.04823 4.94458 3.82117 4.14034 4.14984 4.08238 0.47074 3.24292 3.75786 6.06473 4.83904 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 15 3.30802 4.73421 4.90834 4.62380 4.05884 4.30597 5.35458 2.20928 4.50651 2.66368 3.96489 4.71532 4.85992 4.83999 4.66110 3.87513 3.67074 0.51036 5.92763 4.68446 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 16 3.30802 4.73421 4.90834 4.62380 4.05884 4.30597 5.35458 2.20928 4.50651 2.66368 3.96489 4.71532 4.85992 4.83999 4.66110 3.87513 3.67074 0.51036 5.92763 4.68446 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 17 3.30802 4.73421 4.90834 4.62380 4.05884 4.30597 5.35458 2.20928 4.50651 2.66368 3.96489 4.71532 4.85992 4.83999 4.66110 3.87513 3.67074 0.51036 5.92763 4.68446 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 18 3.52549 4.83071 5.09945 4.76681 3.84329 4.65463 5.42740 0.55585 4.61216 2.34536 3.72427 4.94099 5.06370 4.92239 4.74966 4.24186 3.82673 2.03574 5.82753 4.59676 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 19 3.52549 4.83071 5.09945 4.76681 3.84329 4.65463 5.42740 0.55585 4.61216 2.34536 3.72427 4.94099 5.06370 4.92239 4.74966 4.24186 3.82673 2.03574 5.82753 4.59676 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 20 3.52549 4.83071 5.09945 4.76681 3.84329 4.65463 5.42740 0.55585 4.61216 2.34536 3.72427 4.94099 5.06370 4.92239 4.74966 4.24186 3.82673 2.03574 5.82753 4.59676 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 21 3.70270 5.32012 4.37379 4.31858 5.20658 3.97726 5.31006 4.95195 4.43542 4.49013 5.58764 4.55245 0.22398 4.80166 4.57944 3.89578 4.19267 4.52049 6.18788 5.34578 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 22 3.70270 5.32012 4.37379 4.31858 5.20658 3.97726 5.31006 4.95195 4.43542 4.49013 5.58764 4.55245 0.22398 4.80166 4.57944 3.89578 4.19267 4.52049 6.18788 5.34578 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 23 3.43253 0.26903 5.01025 4.90449 4.82660 3.89773 5.43383 4.12223 4.75998 3.98264 5.13328 4.75658 4.64004 5.08068 4.76692 3.70037 3.94758 3.81283 6.06152 5.09818 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 24 3.54068 5.21960 4.32718 4.31392 5.37247 0.21565 5.35670 5.15341 4.56996 4.71430 5.72131 4.49457 4.62262 4.84916 4.70501 3.73442 4.06373 4.56936 6.27560 5.50666 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 25 0.42569 4.59849 4.17164 4.03633 4.74984 3.40039 4.97010 3.97524 4.07148 3.82444 4.81650 4.00126 4.19599 4.35922 4.25022 2.95736 3.27647 3.51632 6.10811 4.99510 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 26 0.42569 4.59849 4.17164 4.03633 4.74984 3.40039 4.97010 3.97524 4.07148 3.82444 4.81650 4.00126 4.19599 4.35922 4.25022 2.95736 3.27647 3.51632 6.10811 4.99510 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 27 3.88228 5.19292 5.12372 4.80167 3.47250 4.71677 5.28586 2.73614 4.57119 0.39161 3.37474 5.02769 5.07495 4.79027 4.63738 4.41765 4.16108 2.91674 5.52007 4.36632 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 28 3.54068 5.21960 4.32718 4.31392 5.37247 0.21565 5.35670 5.15341 4.56996 4.71430 5.72131 4.49457 4.62262 4.84916 4.70501 3.73442 4.06373 4.56936 6.27560 5.50666 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 29 3.80075 5.51977 4.36097 3.79327 5.03312 4.12304 4.42961 4.65367 2.71114 4.06214 5.07707 4.09222 4.62515 3.64834 0.37062 3.87727 4.04461 4.35854 5.89406 4.87155 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 30 3.07495 4.75368 4.01878 3.40036 3.85461 3.95957 4.15281 1.47376 2.74182 2.69226 3.78913 3.73760 4.35316 3.42624 1.49574 3.31754 3.30991 2.70522 5.33766 4.11483 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 31 3.63527 5.52983 3.84562 3.40189 5.05828 4.01126 4.24373 4.53982 0.45119 3.99160 4.95642 3.78525 4.49863 3.42682 2.74041 3.66022 3.86056 4.22776 5.89312 4.81476 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01746 4.45233 5.17468 0.61958 0.77255 0.48576 0.95510 32 0.42569 4.59849 4.17164 4.03633 4.74984 3.40039 4.97010 3.97524 4.07148 3.82444 4.81650 4.00126 4.19599 4.35922 4.25022 2.95736 3.27647 3.51632 6.10811 4.99510 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01179 4.44666 * 0.61958 0.77255 0.00000 * //