HMMER3/b [3.0 | March 2010] NAME RS4NT ACC PF08071.7 DESC RS4NT (NUC023) domain LENG 38 ALPH amino RF no CS yes MAP yes DATE Fri Oct 5 21:19:40 2012 NSEQ 34 EFFN 5.847900 CKSUM 3984592279 GA 20.40 20.40; TC 20.60 20.60; NC 20.30 20.20; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.9299 0.71955 STATS LOCAL VITERBI -7.6873 0.71955 STATS LOCAL FORWARD -4.0971 0.71955 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.60018 5.21327 3.74434 3.17775 3.61286 2.67403 2.79261 3.25552 2.06572 2.69142 3.73962 3.54351 2.40416 3.50199 2.47695 2.75228 3.01050 3.14797 3.48285 3.87175 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.00000 * 1 2.75764 5.52226 3.44646 2.88600 4.83339 3.11004 4.11578 4.28467 1.68425 3.81301 2.20638 3.42072 4.32094 3.23000 1.84322 2.48897 2.46651 3.89689 5.98373 4.61028 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 2 2.84576 3.40847 4.78598 4.26400 4.17967 0.63006 4.87957 3.53008 4.15243 3.27769 3.48297 4.38106 4.70372 4.38660 4.35190 3.51461 3.02255 3.28089 5.67116 2.97384 2 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.03567 5.48230 3.47753 0.61958 0.77255 0.48576 0.95510 3 2.86869 5.14883 3.62523 3.06544 4.34655 2.62808 3.33081 2.14883 3.04979 3.17230 4.23267 3.56113 1.89845 2.92878 3.07725 1.96061 3.34146 2.93745 5.68219 4.38358 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00638 5.45301 6.17536 0.61958 0.77255 0.60960 0.78431 4 4.43070 6.41656 5.26755 4.13245 6.12560 4.91102 4.55722 5.30636 0.70789 3.30721 5.48352 4.39572 5.18844 2.97753 1.19785 4.38812 4.48033 5.01674 6.47939 5.46899 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00638 5.45301 6.17536 0.61958 0.77255 0.41545 1.07894 5 3.42526 5.82666 3.03913 3.11889 3.58199 4.15171 3.41203 4.64870 0.91951 4.09744 4.87680 3.62620 4.53070 3.34607 1.57760 3.39125 3.63288 4.24730 6.17680 4.85343 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.07808 5.48230 2.64582 0.61958 0.77255 0.48576 0.95510 6 3.96702 5.96175 4.22302 3.89273 5.12753 4.47482 0.37604 5.14625 3.15481 4.57457 5.49417 4.24582 5.03128 3.99639 2.76511 3.14971 4.27116 4.74966 6.31444 4.93838 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00666 5.41088 6.13323 0.61958 0.77255 0.34622 1.22880 7 3.77688 5.13214 5.55745 4.95594 3.80629 4.96815 5.25875 3.14009 4.76734 0.56092 2.48270 5.06675 5.23894 2.70464 4.81296 4.28898 3.99807 2.67690 5.64683 3.54289 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 8 4.65604 6.53723 5.56284 4.35914 6.31875 5.04771 4.68502 5.48610 0.30121 4.72528 5.65875 4.57307 5.33560 3.81246 2.02697 4.61618 4.68479 5.21052 6.58843 5.62433 8 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 9 2.61817 5.40425 4.62371 4.11714 5.57526 4.12381 5.03219 4.98811 3.58198 4.56176 5.37025 4.32379 4.80228 4.21936 0.47787 2.59490 2.63095 4.41961 6.69511 5.51775 9 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 10 3.17774 4.57519 5.00012 4.39408 2.94764 4.33121 4.65675 2.23370 3.28902 1.03093 3.69066 4.44583 4.69598 2.89889 4.26650 3.08721 3.40985 2.15250 5.19415 3.28684 10 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 11 1.56533 5.26320 3.55818 2.99972 4.48642 3.96466 4.17326 3.89419 2.38761 3.51519 2.97283 2.28365 3.63373 3.33687 3.44667 2.44621 2.41314 2.65432 5.77777 3.75332 11 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 12 0.40121 5.14935 5.49234 5.27770 5.64042 4.00170 5.90344 4.97133 5.17877 4.77009 5.58484 4.81154 4.84526 5.32691 5.26530 1.99119 3.31014 2.75587 7.03967 5.95343 12 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 13 4.13490 6.04623 4.44606 4.49583 6.24390 4.56540 5.91456 6.10996 5.03543 5.64024 6.55178 2.64978 0.20018 5.25735 5.32806 4.26825 4.66271 5.37181 7.35510 6.23759 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 14 2.73908 5.59933 3.36119 2.80521 4.93756 3.88197 3.14381 4.41845 1.47514 3.90152 4.64185 2.93533 3.48374 2.82145 2.31963 2.37349 2.52791 3.04222 6.03597 3.50009 14 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 15 2.72945 5.44235 3.13043 2.88241 2.16801 3.54624 2.04328 4.16113 2.66509 3.71843 2.88953 2.87066 4.30734 3.23580 2.97212 2.16864 2.49942 3.79627 5.91764 4.55147 15 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 16 5.03262 6.25218 6.26223 6.06241 3.74415 5.61128 5.32605 2.60297 5.66826 3.59959 5.03321 5.80341 6.05193 5.81937 5.63020 5.33110 5.33777 4.31195 0.24050 3.79117 16 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 17 3.13019 5.24199 3.58724 2.72990 4.45754 2.61426 4.18876 3.86038 2.47436 2.36333 2.02530 3.53595 1.73455 2.82644 3.45585 3.19047 3.36116 3.56112 5.76011 3.77286 17 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 18 4.01695 5.28300 6.03041 5.46124 4.05091 5.36636 5.73779 1.11324 5.30212 1.00151 3.88449 5.53038 5.58710 5.34907 5.30530 4.72543 4.24651 2.07829 6.00593 2.89342 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 19 2.51561 5.61466 1.91986 2.63465 4.95937 3.87837 2.70607 4.44510 2.19865 3.09572 4.65544 2.68466 2.24790 3.16216 2.94441 2.64366 2.90004 4.00511 6.04752 4.63675 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 20 4.36852 6.40800 5.07583 4.05905 6.09679 4.87153 4.56283 5.30130 0.91040 4.58048 5.47638 4.35502 2.97825 3.02253 0.99409 4.32437 4.43902 4.99675 6.49373 5.45909 20 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 21 3.28852 5.48301 3.70661 3.11556 4.75534 4.09008 4.22773 4.15943 0.98962 1.94706 3.29989 3.61455 4.46945 2.87408 2.87088 2.85735 3.21996 3.83590 5.94015 4.63714 21 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 22 2.40768 5.47718 2.98907 1.76807 4.76819 1.97498 4.10319 3.47007 2.86444 2.86228 4.53407 3.40176 4.30059 3.22115 3.34588 2.16059 2.49189 3.44130 5.94566 4.57071 22 - S 2.68624 4.42231 2.77526 2.73129 3.46360 2.40491 3.72501 3.29360 2.67747 2.69361 4.24696 2.90353 2.73746 3.18152 2.89740 2.37893 2.77526 2.98524 4.58483 3.61509 0.10443 2.33158 6.20465 0.15821 1.92192 0.48576 0.95510 23 2.98321 5.70606 2.63630 2.66753 5.03536 1.14794 3.40463 4.51762 2.25103 4.00422 4.75490 3.04319 4.35247 3.26538 3.41900 3.16891 3.44577 4.08916 6.14378 2.51809 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 24 2.61317 4.08051 4.05625 3.48745 3.98640 4.13587 4.39114 2.07545 1.72868 3.06208 3.95634 3.88476 4.51454 3.31831 2.62802 3.38294 2.39219 2.04496 5.43620 3.05832 25 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 25 5.76272 6.52498 6.40717 6.46644 0.74177 6.06469 4.55164 5.27183 6.22034 4.31647 5.75069 5.52291 6.29449 5.73498 5.92655 5.48842 5.93416 5.24762 1.21483 1.83977 26 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 26 1.07335 4.83582 4.56343 4.01548 4.07547 4.23890 4.73496 2.57859 3.93394 3.12746 4.05680 2.88138 4.70060 4.19181 4.18853 3.55746 1.76916 2.17011 5.57738 4.37414 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 27 3.25437 4.69598 4.90722 4.32547 3.83833 4.37919 4.75824 2.63840 4.18143 2.53738 3.83900 4.45723 1.72945 4.38014 4.31260 3.04953 2.05829 1.23136 5.37475 4.18797 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 28 3.81383 6.05278 4.26924 3.53560 5.52908 4.48045 3.27832 4.87727 0.99864 4.28078 3.42112 3.96514 4.82145 3.51459 1.23896 3.78661 2.67148 4.52461 6.30745 5.11481 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 29 3.26857 4.95974 4.88830 4.41421 4.45979 4.16321 5.09580 2.58075 4.31302 3.50268 4.43488 4.49140 0.67110 4.55906 4.52290 3.04403 2.25435 2.75398 5.96084 4.77458 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 30 2.75475 5.29887 3.57950 3.01921 4.53149 3.98127 3.33230 3.94459 2.97846 3.08922 4.38074 3.52915 4.37265 3.34697 2.20069 1.00946 3.06395 3.63238 5.80922 3.41761 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 31 2.13686 5.35519 3.89069 3.42952 5.15113 3.96718 4.64125 4.60228 3.46657 4.18436 4.96686 3.28181 1.05332 3.38112 3.91000 1.73351 2.46209 4.11888 6.37938 5.06123 32 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 32 5.37681 6.76379 6.20853 6.28564 7.05969 0.03152 7.06042 7.19065 6.56644 6.50638 7.63599 6.39130 6.12566 6.80245 6.47107 5.61617 5.91712 6.52125 7.60941 7.26361 33 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 33 2.31126 5.23326 5.22418 5.22198 6.06573 4.00747 6.06638 5.57774 5.35451 5.26950 6.01678 4.81435 0.30408 5.46778 5.42146 2.82868 3.89953 4.64863 7.39687 6.34997 34 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 34 5.89349 7.00875 5.91379 5.92532 5.69616 5.59095 0.04191 6.92684 5.88824 6.09769 7.37630 6.22442 6.23430 6.36991 5.93644 6.05281 6.30059 6.60071 6.94434 5.65733 35 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 35 2.50846 5.60399 3.37078 2.81663 4.95262 3.42508 4.07978 4.43367 1.49592 3.91531 4.65561 2.79354 2.51206 3.17858 2.89736 1.75118 2.88487 3.99915 6.04798 4.64273 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 36 2.61623 4.80909 4.91872 4.32425 3.81729 4.49998 4.80430 2.07543 1.57125 1.39973 2.20624 4.50838 4.84725 4.37652 4.29598 3.79767 3.59970 2.92904 5.42419 4.25530 37 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 37 3.10451 5.60674 2.72364 1.71131 4.94827 3.38808 2.91908 3.76370 2.80302 3.30248 4.64834 2.98429 4.27294 2.89113 1.77098 2.77009 2.75839 2.96002 6.04154 4.63273 38 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00620 5.48230 6.20465 0.61958 0.77255 0.48576 0.95510 38 2.80903 5.61487 3.10666 1.39181 3.31539 3.87839 3.36500 4.44546 2.11271 3.92001 4.65563 2.54772 4.27200 3.16209 2.51162 2.57148 2.70630 4.00538 6.04766 4.63687 39 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00418 5.48028 * 0.61958 0.77255 0.00000 * //