HMMER3/b [3.0 | March 2010] NAME Antimicrobial14 ACC PF08109.6 DESC Lactocin 705 family LENG 31 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 04:32:50 2012 NSEQ 2 EFFN 1.207031 CKSUM 2675202609 GA 21.00 21.00; TC 89.90 89.90; NC 19.50 18.30; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.2960 0.71977 STATS LOCAL VITERBI -7.3882 0.71977 STATS LOCAL FORWARD -4.1282 0.71977 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.66017 4.96572 3.24444 3.65800 3.26642 1.83938 3.02871 2.67023 2.38766 2.39091 3.59854 3.32340 3.33440 3.36490 3.13533 2.76707 3.64686 3.27116 5.36887 2.96363 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.00000 * 1 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 2 3.36711 4.85839 4.54385 4.19134 3.47740 4.17575 4.82839 2.70012 3.93199 2.02438 0.74646 4.40989 4.65625 4.29447 4.08278 3.75054 3.69023 2.75233 5.36132 4.15328 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 3 2.58277 4.49763 3.64404 3.50270 4.54049 3.22299 4.58751 4.13336 3.60756 3.82668 4.72874 3.63915 4.00087 3.92441 3.86314 0.59521 3.09840 3.56912 5.88054 4.63363 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 4 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 5 3.91761 5.23164 4.49473 4.32130 2.44448 4.34796 3.90388 3.87680 4.16962 3.21560 4.50886 4.28638 4.81971 4.36700 4.25706 4.00324 4.21071 3.76938 4.09802 0.47531 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 6 3.38107 4.70921 4.90214 4.55086 3.70024 4.49986 5.22149 0.66651 4.38929 2.21976 3.59063 4.74139 4.90919 4.70642 4.54101 4.05555 3.67998 1.95285 5.66440 4.42738 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 7 3.31041 5.26022 3.27365 3.05865 4.48527 3.70943 4.21207 4.20772 2.85397 3.66345 4.70165 3.51378 4.28292 0.63355 3.11960 3.35055 3.61763 3.91649 5.68709 4.42239 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 8 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 9 3.38107 4.70921 4.90214 4.55086 3.70024 4.49986 5.22149 0.66651 4.38929 2.21976 3.59063 4.74139 4.90919 4.70642 4.54101 4.05555 3.67998 1.95285 5.66440 4.42738 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 10 3.41709 5.07989 4.07228 3.98646 4.91184 3.74459 5.00896 4.59297 4.08544 4.16124 5.24245 4.24135 0.31750 4.45938 4.26344 3.60222 3.89467 4.18448 5.95722 5.04451 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 11 3.51236 5.64004 0.46138 2.70754 5.08971 3.59366 4.38889 4.78913 3.56489 4.32648 5.33435 3.27814 4.27680 3.64247 4.12369 3.44013 3.86638 4.38867 6.16615 4.91863 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 12 3.85553 5.13696 4.82937 4.64228 0.51053 4.40517 4.14342 3.35095 4.54507 2.62957 4.02725 4.52846 4.86742 4.59906 4.55842 4.08950 4.16353 3.36983 4.30063 2.62854 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 13 3.67090 5.01898 4.87166 4.53373 3.35802 4.51764 5.06038 2.60280 4.29977 0.48627 3.28344 4.77022 4.89272 4.56206 4.39785 4.17176 3.95244 2.74643 5.36852 4.18327 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 14 3.42563 5.35616 3.62695 3.19426 4.84352 3.84222 4.07875 4.30698 0.57442 3.78799 4.74631 3.59157 4.32865 3.26016 2.61702 3.45161 3.65630 3.99819 5.73562 4.62223 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 15 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 16 3.91761 5.23164 4.49473 4.32130 2.44448 4.34796 3.90388 3.87680 4.16962 3.21560 4.50886 4.28638 4.81971 4.36700 4.25706 4.00324 4.21071 3.76938 4.09802 0.47531 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 17 3.67090 5.01898 4.87166 4.53373 3.35802 4.51764 5.06038 2.60280 4.29977 0.48627 3.28344 4.77022 4.89272 4.56206 4.39785 4.17176 3.95244 2.74643 5.36852 4.18327 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 18 3.58283 5.28424 3.65874 3.48095 3.68278 3.88994 0.49747 4.35606 3.31764 3.78461 4.87772 3.86465 4.47473 3.85883 3.54678 3.65625 3.90947 4.08319 5.13490 3.62591 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 19 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 20 3.38107 4.70921 4.90214 4.55086 3.70024 4.49986 5.22149 0.66651 4.38929 2.21976 3.59063 4.74139 4.90919 4.70642 4.54101 4.05555 3.67998 1.95285 5.66440 4.42738 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 21 2.58277 4.49763 3.64404 3.50270 4.54049 3.22299 4.58751 4.13336 3.60756 3.82668 4.72874 3.63915 4.00087 3.92441 3.86314 0.59521 3.09840 3.56912 5.88054 4.63363 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 22 0.54240 4.46494 3.95511 3.79209 4.53614 3.27382 4.75445 3.73072 3.82126 3.59029 4.59037 3.81470 4.05479 4.12467 4.02564 2.81966 3.12760 3.30636 5.91679 4.77486 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 23 0.54240 4.46494 3.95511 3.79209 4.53614 3.27382 4.75445 3.73072 3.82126 3.59029 4.59037 3.81470 4.05479 4.12467 4.02564 2.81966 3.12760 3.30636 5.91679 4.77486 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 24 3.14922 5.12172 3.04754 2.98678 4.56106 3.53042 4.36341 4.38943 3.31837 3.99053 4.95974 0.58245 4.21156 3.65510 3.67236 3.21113 3.55576 3.96556 5.81564 4.49298 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 25 3.42563 5.35616 3.62695 3.19426 4.84352 3.84222 4.07875 4.30698 0.57442 3.78799 4.74631 3.59157 4.32865 3.26016 2.61702 3.45161 3.65630 3.99819 5.73562 4.62223 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 26 3.58283 5.28424 3.65874 3.48095 3.68278 3.88994 0.49747 4.35606 3.31764 3.78461 4.87772 3.86465 4.47473 3.85883 3.54678 3.65625 3.90947 4.08319 5.13490 3.62591 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 27 3.42563 5.35616 3.62695 3.19426 4.84352 3.84222 4.07875 4.30698 0.57442 3.78799 4.74631 3.59157 4.32865 3.26016 2.61702 3.45161 3.65630 3.99819 5.73562 4.62223 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 28 3.42563 5.35616 3.62695 3.19426 4.84352 3.84222 4.07875 4.30698 0.57442 3.78799 4.74631 3.59157 4.32865 3.26016 2.61702 3.45161 3.65630 3.99819 5.73562 4.62223 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 29 3.28002 4.99154 4.03837 4.00080 5.09411 0.29802 5.07289 4.81885 4.23829 4.41000 5.40409 4.20493 4.39351 4.52961 4.40719 3.46720 3.79325 4.26463 6.05540 5.21757 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 30 3.55696 5.32274 4.09713 3.54371 4.79033 3.93396 4.22972 4.38178 2.53682 3.82003 4.82645 3.86140 4.43179 3.44437 0.48803 3.63199 3.80396 4.09121 5.70926 4.64570 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02043 4.29676 5.01911 0.61958 0.77255 0.48576 0.95510 31 3.67090 5.01898 4.87166 4.53373 3.35802 4.51764 5.06038 2.60280 4.29977 0.48627 3.28344 4.77022 4.89272 4.56206 4.39785 4.17176 3.95244 2.74643 5.36852 4.18327 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01380 4.29013 * 0.61958 0.77255 0.00000 * //