HMMER3/b [3.0 | March 2010] NAME TGF_beta_GS ACC PF08515.7 DESC Transforming growth factor beta type I GS-motif LENG 29 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 20:18:11 2012 NSEQ 28 EFFN 14.010254 CKSUM 1298471550 GA 20.40 20.40; TC 20.50 21.00; NC 19.90 20.00; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.7455 0.71993 STATS LOCAL VITERBI -7.1495 0.71993 STATS LOCAL FORWARD -4.6095 0.71993 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.80354 4.78886 3.01571 3.23093 3.91594 2.10258 4.25877 3.00480 3.35925 2.23756 3.37179 4.10751 3.08184 3.04012 2.84156 1.99410 2.43679 3.00432 5.67496 4.13984 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.00000 * 1 3.60709 6.11043 2.72446 1.91237 5.45241 4.38191 4.56935 3.35521 1.67367 4.41439 3.02422 3.35048 2.30118 3.66669 3.79756 2.36735 2.06902 4.49941 6.54496 3.46593 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 2 3.60622 6.11907 2.62979 2.08656 5.46507 2.85584 3.33865 3.68598 2.59725 3.78908 3.78376 2.77514 3.84420 2.85057 3.79391 2.18044 1.43982 4.51021 6.55119 5.13967 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 3 3.73502 5.12455 5.60532 4.99626 4.21807 4.89394 2.91411 2.01164 3.26194 1.24763 2.16991 5.02517 3.69864 4.95019 4.84257 2.21124 2.99116 2.71658 5.74485 3.36907 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 4 2.28836 3.88865 2.57502 3.29967 5.46122 2.41603 3.07709 4.94700 2.06435 2.76584 5.15714 2.71343 4.77375 2.08005 2.68119 2.45999 3.83756 3.21139 6.54926 5.13847 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 5 4.97185 7.80919 0.56840 1.93878 7.08671 3.11493 5.67713 6.71739 4.93523 6.12555 7.06820 4.40742 2.20357 4.87022 5.72368 2.52404 5.30918 6.19868 8.27451 6.59019 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 6 4.22335 5.56428 6.20155 5.58855 3.42171 5.42329 5.73385 2.10256 5.38074 1.01303 1.50738 5.59168 5.72411 5.44453 5.36263 4.74604 4.44848 2.46993 3.88548 2.49401 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 7 2.40521 5.14633 5.75483 5.13895 2.40900 4.94972 5.28406 1.56067 4.92145 1.42806 2.01682 5.11705 3.41929 5.04673 4.92366 4.26240 4.00790 2.41176 5.76758 3.67991 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 8 2.73686 6.00823 1.63477 1.17061 3.73084 4.40834 4.60117 4.76194 3.35709 4.29364 3.81330 3.89636 3.39703 3.15901 3.84080 3.60182 3.22562 3.16889 6.46953 2.60433 8 - - 2.68653 4.42260 2.77419 2.73158 3.46389 2.40490 3.72530 3.29389 2.67653 2.69390 4.24725 2.90143 2.73775 3.18181 2.89836 2.37922 2.77555 2.98553 4.58512 3.61538 0.91659 1.70197 0.87276 0.29713 1.35847 0.48576 0.95510 9 2.73931 5.74828 1.53508 1.63198 5.08249 4.03465 2.80729 4.56155 2.96699 4.04893 3.10588 3.50588 4.43027 2.92426 3.45861 2.74743 3.49324 4.13317 2.70599 4.78178 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00478 5.74104 6.46339 0.61958 0.77255 0.96818 0.47767 10 3.45597 5.12099 1.98866 3.85877 2.01378 4.45889 3.40444 3.60678 3.80382 2.79071 2.57313 4.23624 4.83641 4.09342 4.13193 1.68227 2.31549 3.38978 5.69962 2.77653 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00388 5.94945 6.67179 0.61958 0.77255 0.23439 1.56566 11 3.12842 2.45508 2.94307 2.27411 5.11649 4.41244 4.61289 2.29877 3.39695 4.12655 4.92510 3.92794 4.80344 2.27817 3.86826 1.78634 1.87111 3.03250 6.34959 4.99939 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00291 6.23798 6.96033 0.61958 0.77255 0.31564 1.30683 12 3.71631 3.75521 2.64852 3.95032 4.78194 3.17149 4.96653 4.15578 3.92724 2.65801 4.72476 4.37534 5.05543 4.24120 4.31533 1.68907 0.88473 3.89938 6.19224 3.72434 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 13 2.54019 5.94709 6.50473 6.46220 6.90025 2.95061 6.97690 6.42921 6.36082 6.11385 6.82342 5.68039 2.90713 6.41339 6.33046 0.39380 2.17844 5.41749 8.22971 7.24539 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 14 3.19106 6.36353 6.49585 6.57276 7.23877 0.08075 7.27592 6.87434 6.73021 6.51183 7.28420 6.04277 5.99539 6.77934 6.67350 4.70874 5.08926 5.87619 8.35592 7.55253 16 - - 2.68652 4.41613 2.77554 2.73157 3.46388 2.40547 3.72529 3.29388 2.67775 2.69389 4.24724 2.90381 2.73774 3.18180 2.89835 2.37737 2.77404 2.98552 4.58511 3.61537 0.12536 2.14635 7.00276 0.68722 0.69910 0.48576 0.95510 15 4.20996 3.17254 6.74027 6.79863 6.98918 4.90374 7.17364 6.60817 6.64766 6.29107 7.03120 5.89015 5.78939 6.68741 6.52957 0.09959 4.81527 5.59885 8.26577 7.31719 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 16 6.75558 7.84938 7.40092 7.48993 8.11870 0.00925 8.10692 8.40086 7.72252 7.57408 8.80566 7.65102 7.15426 7.98099 7.52355 7.03883 7.26819 7.81183 8.50537 8.35486 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 17 4.05445 5.96133 6.40533 6.38728 6.69770 4.77161 6.91826 6.16893 6.24428 5.85508 2.65647 5.67982 5.65020 6.37526 6.22215 0.18299 3.23051 5.32976 8.08989 7.04144 21 - - 2.68517 4.42232 2.77527 2.73130 3.46361 2.40520 3.72502 3.29361 2.67748 2.69362 4.24697 2.90354 2.73747 3.18154 2.89808 2.37894 2.77527 2.98526 4.58484 3.61510 0.05393 2.96439 7.00276 0.13890 2.04262 0.48576 0.95510 18 6.75558 7.84938 7.40092 7.48993 8.11870 0.00925 8.10692 8.40086 7.72252 7.57408 8.80566 7.65102 7.15426 7.98099 7.52355 7.03883 7.26819 7.81183 8.50537 8.35486 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 19 3.73715 5.36136 4.78900 4.21216 3.19197 4.75422 5.01261 3.83179 2.36137 0.89008 2.30075 3.16500 2.39221 3.12031 4.38566 4.01660 3.96741 3.62517 5.94899 4.73415 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 20 1.99563 5.96976 6.47350 6.52302 6.93768 4.76457 7.03763 6.45319 6.46491 6.15589 6.87541 5.71125 0.30454 6.50007 6.38942 4.27532 2.54185 5.44269 8.26854 7.30059 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 21 2.88811 5.16287 5.70815 5.10185 2.09747 4.93693 5.26206 3.59388 4.89451 0.83558 4.27744 5.09360 5.30665 5.02845 4.91339 3.10630 1.97716 3.41234 5.75123 2.69980 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 22 5.93813 6.97069 7.91486 7.32738 3.38274 7.56058 7.59299 3.98613 7.25675 0.13975 2.97618 7.77922 7.09851 6.68400 6.97972 7.10921 6.08158 4.48160 7.08979 6.26248 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 23 3.79543 5.22147 5.52030 4.94539 4.34877 4.92153 2.78961 1.96228 4.78219 3.42751 4.36307 3.29022 5.31128 4.96490 4.87550 2.99377 2.99488 0.66097 5.87772 4.69460 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 24 4.98498 7.12128 5.06526 4.51999 6.74215 5.41464 2.86817 6.03872 2.02194 5.33781 6.23097 4.90435 5.80068 0.38052 3.64757 3.24475 5.10990 5.70545 7.26336 6.15836 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 25 3.69729 7.05649 6.13132 4.99384 6.71827 5.64671 5.35250 5.93610 3.39982 2.65298 6.18544 5.21062 5.96107 2.47191 0.30401 5.17048 5.25221 5.67780 7.21479 6.21038 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 26 4.09754 6.01239 6.39578 6.45216 6.94020 4.80006 7.03542 6.50080 6.43957 6.19266 6.91988 5.72669 5.68834 6.49800 6.38366 2.24569 0.17351 5.48919 8.25927 7.27131 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 27 4.99360 6.15232 7.15013 6.68826 3.17443 6.69500 7.42792 0.69322 6.65648 2.96545 2.91450 6.87066 6.80719 6.78564 6.76540 6.15644 5.24331 1.12595 7.50870 6.39490 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 28 0.32174 5.96561 6.28340 6.20108 6.86791 2.55751 6.85654 6.38882 6.06562 6.06082 6.78334 5.62213 5.62907 6.25063 3.15622 2.16602 4.63332 5.41233 8.17685 7.16608 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00279 6.28041 7.00276 0.61958 0.77255 0.48576 0.95510 29 2.99914 6.77712 4.85547 4.16980 6.30070 2.70119 5.05800 5.64908 2.39519 5.01542 5.84172 3.08752 5.48055 2.46953 0.54178 4.45163 4.65672 5.27596 7.01419 5.82021 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00188 6.27950 * 0.61958 0.77255 0.00000 * //