HMMER3/b [3.0 | March 2010] NAME SinI ACC PF08671.5 DESC Anti-repressor SinI LENG 30 ALPH amino RF no CS yes MAP yes DATE Sat Oct 6 00:58:23 2012 NSEQ 17 EFFN 10.305420 CKSUM 3571432238 GA 19.80 19.80; TC 19.80 20.80; NC 19.30 18.80; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.9415 0.71988 STATS LOCAL VITERBI -7.1085 0.71988 STATS LOCAL FORWARD -4.5131 0.71988 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.78654 5.97086 2.60740 2.06676 3.09810 3.17636 4.32573 2.60338 2.49931 2.01688 3.47148 3.65804 4.35911 2.88668 3.30951 3.11265 3.42972 2.92665 3.37204 3.93998 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.00000 * 1 5.59996 6.65073 7.60101 7.01154 4.40272 7.22599 7.36806 2.40469 6.93797 0.24345 2.57216 7.45529 6.81034 6.41247 6.68859 6.75799 5.75304 4.11768 6.86865 6.10552 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 2 4.96638 7.78885 0.18569 2.37584 7.06563 4.84140 5.61043 6.77381 4.96121 6.15149 7.17376 4.29668 5.58664 4.82378 5.81203 4.73447 5.31928 6.24770 8.20342 6.55936 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 3 3.41867 5.91225 3.67181 1.71107 5.25167 4.19330 4.37985 4.73223 2.14513 3.05383 2.97664 3.66335 3.00967 1.63887 3.60121 1.85367 3.64951 4.29996 6.34750 4.94203 3 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 4 4.93187 7.78159 1.66667 0.31207 7.03917 4.81583 5.57654 6.73526 4.91895 6.11604 7.13013 4.26468 5.55949 4.78702 5.76769 4.69958 5.28234 6.21040 8.19108 6.52675 4 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 5 7.20592 7.74771 7.26708 7.34583 6.49779 6.37547 7.44515 7.87681 7.44503 6.91600 8.31953 7.55411 6.99697 7.71362 7.21822 7.52249 7.58139 7.65900 0.01427 6.48947 5 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 6 3.51189 4.95050 5.12843 2.96574 4.04955 4.63803 4.95132 2.11106 3.15240 2.45372 2.58341 4.67815 5.00549 2.77055 4.51716 3.93257 2.41788 1.23444 5.56602 2.93690 6 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 7 2.17510 5.91808 2.23820 2.19904 5.26216 2.91528 4.37088 3.08348 2.62627 2.77581 4.95902 2.42023 4.57711 1.80184 3.59875 3.37237 2.83914 4.30819 6.35135 4.94093 7 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 8 5.54914 6.61551 7.53689 6.98653 4.44053 7.13191 7.35402 2.31518 6.90263 0.18164 4.14180 7.38927 6.80360 6.43867 6.68551 6.69157 5.72020 4.00972 6.89200 6.08015 8 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 9 4.79582 5.94578 6.95398 6.49398 4.95812 6.51722 7.25734 0.87751 6.46958 1.92043 2.30745 6.69522 6.59820 6.56633 6.56920 5.98937 5.04350 1.21431 7.27268 6.19182 9 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 10 3.74688 5.92083 4.18923 3.57328 5.21149 4.53228 4.62837 4.60184 1.19836 1.91764 4.99052 4.05627 4.90409 1.88243 2.63561 3.77240 2.67710 2.40070 6.35190 5.07296 10 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 11 4.80882 7.72057 2.12384 0.29574 6.90824 4.73325 2.97003 6.58367 4.76075 5.97556 6.95818 4.16451 5.46805 4.66233 5.58086 4.58048 5.14975 6.06635 8.10620 6.39266 11 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 12 0.03933 6.47008 6.58509 6.65010 7.10211 5.22298 7.24708 6.79143 6.71150 6.40832 7.31947 6.19432 6.05654 6.84682 6.61894 4.91262 5.27626 5.95728 8.06939 7.38566 12 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 13 3.85020 5.56173 4.78910 4.10942 4.71620 4.76228 4.85837 2.12661 1.57747 2.11787 1.52541 4.46423 5.11569 2.85554 2.11625 4.05572 4.05481 3.84865 6.07770 4.88703 13 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 14 2.65805 5.92482 1.98001 1.70990 5.27022 2.77040 4.37311 2.87673 1.72741 4.23020 4.96557 3.65225 4.57930 3.46952 2.74590 2.38106 3.64431 4.31567 6.35719 4.94584 14 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 15 1.65398 4.96450 5.12605 4.53296 4.06423 4.64840 4.96307 2.09849 4.39004 2.47889 2.66636 4.68380 5.01602 1.94852 4.52465 1.72664 3.75577 2.57198 5.58337 4.39726 15 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 16 4.63460 6.52670 5.11359 5.20092 7.03125 0.17592 6.64555 6.84879 5.95813 6.37335 7.25036 2.24744 5.89903 6.01914 6.24153 4.78853 5.19193 5.97605 8.04944 7.09010 16 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 17 4.86736 5.99986 7.04088 6.59802 4.98035 6.65057 7.46552 1.00022 6.59894 1.00155 4.65694 6.83288 6.68826 6.67946 6.70838 6.15208 5.11590 1.52546 7.37483 6.31522 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 18 2.52422 5.91378 3.72524 3.17657 5.26463 4.23125 2.79611 4.73548 2.43282 4.22932 4.98013 3.71688 4.63154 2.69551 3.62598 1.26219 1.51693 4.31350 6.37034 4.97773 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 19 3.70805 5.13107 5.32052 4.72618 4.20502 4.85728 5.17451 1.73517 1.01111 2.48365 2.66038 4.88668 2.52654 4.77242 4.68162 4.15860 3.94022 2.51835 5.78570 4.60754 19 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 20 4.56094 7.34261 1.54940 0.57812 6.60019 4.66656 5.28396 6.18632 2.76799 5.60556 6.49024 4.10065 5.34069 2.57861 5.06286 4.38322 4.86621 5.69982 7.74140 6.13452 20 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 21 4.77278 7.67810 1.10598 0.97635 6.88586 4.71922 5.43461 6.53096 4.71317 5.92754 6.89389 4.14907 5.44734 1.56105 5.51787 4.55002 5.10891 6.01685 8.07367 6.36836 21 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 22 4.70461 5.86097 6.86738 6.43760 1.17355 6.42734 7.13307 1.05432 6.42175 3.50101 4.86633 6.59062 6.57858 6.63007 6.57614 5.90070 4.96340 1.31920 7.26449 5.95277 22 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 23 3.71830 6.01068 4.08354 2.47842 5.33994 4.48269 4.58378 2.78420 1.92402 2.30990 5.07070 3.98036 4.85843 3.70688 0.98317 2.68661 3.92939 4.39530 6.41687 5.11082 23 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 24 3.41252 5.92342 3.66107 1.35456 5.26941 4.18570 2.81312 3.16379 2.19872 4.22859 4.96403 2.66390 4.57907 2.19035 2.58819 2.64363 3.64348 4.31459 6.35509 3.07675 24 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 25 6.28060 7.02958 6.89627 6.96742 0.44977 6.55293 5.04538 5.78263 6.72552 4.81123 6.25657 6.01909 6.78805 6.23428 6.42694 5.99146 6.45402 5.76590 5.10578 1.15547 25 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 26 5.24767 6.43344 7.17491 6.65015 2.55679 6.56314 6.70833 3.73133 6.50909 0.26118 4.15893 6.79256 6.54342 6.20696 6.35706 6.01599 2.67819 4.10369 6.56605 5.44562 26 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 27 2.56694 5.92122 2.28478 1.88728 5.26704 4.18232 3.10359 4.75353 2.54825 2.51867 2.91304 2.23285 4.57581 2.54478 2.74075 3.37079 2.76363 4.31226 6.35345 4.94206 27 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 28 3.51421 4.93652 5.20787 4.60944 1.72549 2.85181 4.96914 3.37583 4.44948 1.78955 4.05380 4.71974 5.01754 4.63057 2.77048 1.99748 2.19229 2.50212 5.55314 2.92746 28 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 29 3.41225 5.88262 3.67597 2.38720 5.21110 3.01964 3.04219 3.03101 3.12260 4.18081 2.28213 1.95147 4.58526 1.73408 3.61244 2.26028 2.95432 4.26434 6.32537 4.92464 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00371 5.99332 6.71566 0.61958 0.77255 0.48576 0.95510 30 4.46798 6.67720 4.87889 2.82623 6.25488 5.04900 4.89369 5.55340 0.53608 4.88341 5.73630 4.52342 2.21538 2.72156 2.43934 4.42119 4.59975 5.20439 6.84649 5.71206 30 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00250 5.99210 * 0.61958 0.77255 0.00000 * //