HMMER3/b [3.0 | March 2010] NAME Clathrin-link ACC PF09268.5 DESC Clathrin, heavy-chain linker LENG 24 ALPH amino RF no CS no MAP yes DATE Thu Oct 11 22:22:46 2012 NSEQ 17 EFFN 17.000000 CKSUM 353618215 GA 20.60 20.60; TC 20.60 20.60; NC 20.30 20.30; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.4639 0.72116 STATS LOCAL VITERBI -6.3798 0.72116 STATS LOCAL FORWARD -4.8709 0.72116 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.30477 5.22857 3.30379 2.85774 4.06515 3.81167 4.86910 2.35104 3.21632 1.94350 4.02512 2.35284 2.91243 3.20646 2.90342 2.86680 2.99730 2.60677 7.04787 3.47031 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.00000 * 1 4.87438 7.61244 1.43763 0.65901 6.88782 5.05497 5.63716 6.45904 2.82873 5.89094 6.74637 4.49311 2.73404 4.80233 5.36703 4.71673 2.82935 5.97831 8.02895 6.44827 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 2 1.71737 6.28396 2.56574 1.43526 5.62957 4.53066 4.72504 5.11737 2.58427 4.58950 5.32515 1.89970 4.92932 2.83821 3.95842 2.63536 2.77582 4.67502 6.71567 5.30200 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 3 2.78474 6.30100 4.02014 3.48543 5.65164 2.22600 2.98893 5.13419 2.63946 4.60970 5.35051 1.65407 4.96167 2.30098 3.96728 3.76413 1.27894 4.69688 6.73723 5.33094 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 4 5.18619 6.31552 7.40222 7.00476 5.73163 7.05494 8.16629 0.26863 7.04960 2.76246 5.37570 7.23270 7.15676 7.33720 7.28279 6.58160 5.45000 1.93878 8.17771 6.95554 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 5 5.13539 6.27018 7.36140 6.98075 5.90244 7.00263 8.24005 0.79774 7.03616 4.19554 5.53132 7.19311 7.15185 7.42048 7.31649 6.53612 5.40640 0.67994 8.35300 7.03030 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 6 4.40411 6.37134 5.30953 5.39420 7.15671 5.01433 6.79146 6.76983 6.09987 6.39626 7.16056 1.96544 0.30881 6.12388 6.36531 2.61610 4.98386 5.79715 8.44975 7.28637 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 7 6.74947 7.49026 7.35577 7.43034 1.27428 7.01178 5.49986 6.25560 7.18834 5.28187 6.72789 6.47597 7.24647 6.69254 6.88676 6.45230 6.92117 6.23624 5.56002 0.37022 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 8 2.57710 6.25074 7.33170 6.94908 5.90294 6.90990 8.14934 0.59306 6.99375 4.21297 5.53619 7.13200 7.10112 7.36987 7.26121 6.42944 5.37653 1.09722 8.31497 6.99562 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 9 3.80367 3.04955 4.20536 3.64576 5.26388 4.62749 4.83109 4.68086 1.80535 1.43502 5.08928 2.98900 5.02029 2.88226 4.05725 2.29304 1.62328 4.35328 6.51435 5.18173 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 10 3.90933 6.43323 2.66520 3.52908 5.78130 2.39439 4.85425 5.27298 3.61555 4.74371 5.48708 0.85408 5.04467 2.30903 2.77767 2.60378 2.96729 4.82843 6.87082 5.44852 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 11 4.12855 6.46907 4.38641 3.85040 5.85135 4.85268 5.00771 5.27290 2.12400 4.77336 5.56444 2.11782 5.25812 1.26472 3.95371 4.11226 1.59650 1.94120 6.90205 5.57823 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 12 6.11521 7.15385 8.07934 7.50614 4.83983 7.69049 7.83573 4.16928 7.42507 0.19264 2.04374 7.96877 7.27193 6.87275 7.15512 7.27866 6.26533 4.66203 7.30921 6.54005 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 13 4.77978 7.05564 4.66121 4.34353 6.71704 5.25507 5.47253 6.11333 3.86954 5.48955 6.33538 1.01921 5.75644 1.17942 2.59225 1.77275 5.02014 5.68698 7.49451 6.25779 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 14 5.15725 7.89190 2.50099 4.02218 7.15846 5.17429 5.83036 6.77704 3.05560 2.76893 7.13525 0.29445 5.87862 5.02227 5.51370 4.96678 5.47966 6.30082 8.29586 6.69654 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 15 2.78442 5.56279 5.24242 2.92795 4.78595 4.94682 5.45678 4.10574 4.69326 1.85278 4.78213 4.98522 0.81357 4.93623 4.93260 2.76788 4.25108 2.15913 6.27838 5.07944 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 16 5.23117 8.12404 1.10579 0.93741 7.37893 2.12627 5.90565 7.03522 5.22524 6.43019 7.41333 4.59983 5.90171 5.10742 6.06969 2.18036 5.58024 6.50402 8.58212 6.85567 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 17 6.88184 7.79040 7.80262 7.70835 6.00914 6.97797 8.08429 5.43346 7.75072 0.02108 5.82080 8.01472 7.40116 7.65810 7.52349 7.61405 7.14330 5.86508 8.01496 7.26300 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 18 0.12428 6.36828 6.79551 6.86839 7.31390 2.50066 7.40006 6.90255 6.87759 6.56715 7.30476 6.11307 6.03322 6.89976 6.77843 4.69745 5.07924 5.87595 8.51894 7.66529 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 19 5.61900 6.73135 7.70594 7.18277 2.80887 7.28421 7.70237 2.11161 7.13107 0.59063 4.69944 7.48126 7.13128 6.87688 7.04265 6.77392 5.82649 1.43461 7.41020 6.52508 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 20 4.80837 7.01085 5.28864 4.52828 6.61863 5.41468 5.30408 5.92956 1.78038 5.27389 6.12010 2.93030 5.76425 4.41961 0.70116 2.23799 2.22777 5.56662 7.24708 6.10404 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 21 5.77225 6.86135 7.83767 7.29450 4.93974 7.44162 7.77841 1.44578 7.24172 0.81187 1.50889 7.65092 7.18679 6.87913 7.09402 6.95072 5.96283 2.57060 7.38370 6.56291 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 22 0.01963 7.12535 7.26738 7.34267 7.76531 5.86679 7.87854 7.56758 7.40182 7.10703 8.02937 6.89238 6.68579 7.53323 7.26360 5.62239 5.98073 6.69532 8.60270 8.05225 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 23 3.91589 2.94515 5.49232 4.91893 4.57870 3.01954 5.41610 2.47994 2.97834 3.66858 4.58941 5.06959 5.40768 4.99978 4.94862 0.91202 2.21948 1.98382 6.08874 4.90110 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00232 6.46389 7.18624 0.61958 0.77255 0.48576 0.95510 24 5.14617 7.21244 5.83338 4.85720 6.89272 5.67419 2.72198 6.11740 2.02679 5.40931 6.29645 5.16824 5.97765 4.52201 0.55590 2.19567 2.76806 5.80095 7.33280 6.28110 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00156 6.46314 * 0.61958 0.77255 0.00000 * //