HMMER3/b [3.0 | March 2010] NAME Ish1 ACC PF10281.4 DESC Putative stress-responsive nuclear envelope protein LENG 38 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 07:39:47 2012 NSEQ 71 EFFN 71.000000 CKSUM 3871109853 GA 24.10 24.10; TC 24.10 24.20; NC 24.00 24.00; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.4661 0.72009 STATS LOCAL VITERBI -7.6012 0.72009 STATS LOCAL FORWARD -3.8626 0.72009 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.72328 6.12427 2.49882 2.60375 3.48283 3.31017 3.50789 3.21738 2.33621 2.27273 4.87800 2.97335 3.71571 3.16674 3.10969 2.38705 3.07739 3.12946 3.18629 3.07662 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.00000 * 1 7.23629 8.31810 8.55040 8.32959 0.68212 8.05590 6.98878 3.25665 8.11059 1.92783 6.98319 7.76291 8.27570 2.91799 7.92733 7.44203 7.43587 3.74914 3.32939 1.65551 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 2 5.49970 8.07676 0.80345 2.32715 7.40317 6.05737 6.39631 6.91212 2.28879 3.98955 7.13811 2.44200 3.65456 2.94982 5.76882 1.89854 5.74952 6.46028 8.50305 7.04486 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 3 2.87883 7.44418 2.26681 3.58069 6.79064 2.51169 3.77428 6.27761 3.56188 4.52906 6.48449 3.53654 6.09690 3.31714 3.79365 1.35664 1.16665 5.83557 7.87603 6.46420 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 4 7.33642 8.39654 9.25942 8.71733 6.08126 8.85222 8.66442 3.89527 8.62535 2.41131 4.09409 8.96929 8.53956 8.13884 8.38957 8.34840 7.49500 3.69962 0.18829 4.22458 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 5 6.58428 9.45319 2.38590 2.70544 8.74953 6.51665 7.27298 8.40879 6.60317 7.80420 8.79151 2.99642 3.11286 6.47650 7.45542 0.63779 1.56298 7.86780 9.95681 8.22722 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 6 4.93131 7.44509 1.82125 2.03903 6.79144 5.70413 4.46021 6.27835 3.68488 2.23001 6.48545 1.92621 6.09787 3.65046 4.04342 2.15007 1.84861 5.83642 7.87697 2.53223 6 - - 2.68047 4.42315 2.77610 2.73213 3.46444 2.40603 3.72585 3.29444 2.67831 2.69445 4.24780 2.90437 2.73830 3.18237 2.89891 2.37977 2.77610 2.98609 4.58567 3.59927 0.06561 2.75965 8.57944 0.69079 0.69551 0.48576 0.95510 7 3.10825 7.53050 1.37084 1.70302 6.87486 5.75764 5.96356 6.36402 2.35597 5.83561 6.57317 2.89862 3.72112 5.06215 5.20681 1.27876 5.24351 4.24695 7.96209 3.82964 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 8 5.02157 7.54199 1.24555 1.48177 6.88684 5.76639 4.32981 6.37578 3.20923 5.84659 6.58466 2.20230 6.17375 1.66625 3.48814 2.82683 5.25467 5.93289 7.97229 4.22602 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 9 2.77314 8.39839 9.35426 8.76841 4.21085 8.97653 9.13986 2.15265 8.70121 0.26205 3.89422 9.20335 8.57624 8.18728 8.45999 8.50425 7.50030 4.28728 8.64886 7.88528 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 10 4.93064 7.44165 5.17931 2.89473 6.78701 3.98276 3.70651 4.19675 0.99547 3.05906 3.79202 4.13577 6.09774 2.65014 1.49177 2.95131 2.95684 5.83245 7.87409 4.47207 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 11 2.03983 7.44360 2.06368 1.52696 6.79008 3.55931 2.36378 6.27705 2.28280 4.06691 6.48389 2.48781 6.09640 2.96824 4.13276 2.71661 3.11827 5.83500 7.87544 4.37490 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 12 3.88533 8.85384 8.71029 2.91784 2.35181 8.38266 6.85697 7.62181 8.54765 6.65010 8.09442 7.83265 8.61323 8.05035 8.24791 7.80978 8.28113 7.59909 0.59077 1.30889 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 13 3.47036 4.60399 7.43903 6.82385 4.15654 6.64609 6.97379 1.96100 6.61124 0.39532 3.95190 6.81579 6.97489 6.70373 6.60247 3.61187 5.68689 4.99065 2.79948 6.25809 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 14 2.50136 7.44056 1.76826 2.10415 6.78561 5.70375 4.30785 2.73361 1.77439 3.39620 6.48122 2.63493 6.09721 4.09304 3.48896 2.57628 5.16111 3.69961 2.95348 2.85675 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 15 3.53184 7.44133 2.89912 1.79901 6.78674 5.70355 3.86306 3.30973 1.67416 3.29355 6.48190 5.17089 6.09702 3.31293 3.07436 1.13343 4.41479 3.65429 7.87381 4.53965 17 - - 2.68994 4.42602 2.77896 2.72903 3.45492 2.40458 3.71758 3.29731 2.66927 2.69156 4.25066 2.90207 2.74116 3.18523 2.89664 2.38263 2.77896 2.98895 4.58853 3.59845 0.14139 2.02753 8.57944 1.37759 0.29060 0.48576 0.95510 16 4.93421 7.41774 5.19370 3.64161 3.64063 3.22369 1.24171 6.22980 2.73080 4.36544 6.46137 2.96974 6.10525 2.12863 4.01081 2.69989 5.16531 2.39987 7.85694 1.77554 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 17 6.00072 8.63287 3.33125 5.18810 8.00119 0.60925 2.75754 7.54856 3.08603 6.99537 7.81366 1.99354 2.91968 5.99731 6.44481 2.54482 3.62108 7.06568 9.12930 7.59986 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 18 4.15968 6.51728 2.78826 3.05540 2.80119 3.28721 6.59388 1.08422 6.13871 3.07228 3.90496 3.59885 4.28030 3.59920 6.20150 3.82686 5.34930 1.44794 4.77148 3.59673 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 19 2.37892 7.42042 3.92967 2.51055 3.27916 5.70955 4.66675 2.61543 1.85909 3.55779 6.46355 3.11834 1.64661 2.56316 5.12720 3.14131 4.32732 2.13561 7.85876 6.45353 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 20 2.24667 6.54254 3.21297 6.15136 2.26038 2.33069 3.79641 2.81160 3.21173 2.69473 3.95809 3.92035 3.76064 6.19246 6.12375 2.44912 2.82351 1.60465 7.15832 3.11112 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 21 2.40753 7.44372 2.18810 2.83505 6.79015 3.11865 2.60402 6.27709 1.76599 5.74958 4.08464 3.38177 2.03959 4.98596 5.11727 2.05930 2.49022 5.83509 7.87559 3.33334 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.04034 7.85709 3.24027 0.61958 0.77255 0.48576 0.95510 22 2.20928 7.40707 2.62138 1.98273 6.75355 4.30540 3.41004 6.24053 1.47203 5.71296 6.44737 3.89395 2.48176 1.94436 3.92369 2.53111 5.12425 3.19709 7.83891 6.42710 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00060 7.81735 8.53969 0.61958 0.77255 1.55494 0.23724 23 2.16957 7.38890 5.15026 3.69648 4.63824 2.56848 4.27199 3.97123 1.58070 4.07291 6.43140 2.40398 2.08753 4.95771 3.37526 2.08084 2.24587 3.78675 7.82579 6.41909 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01155 7.81735 4.50283 0.61958 0.77255 1.55494 0.23724 24 1.99255 7.37933 3.71650 3.03644 3.86442 2.76764 5.84884 4.42516 2.05409 4.09278 3.38078 3.67827 3.37533 2.89364 3.49050 1.84371 3.05956 2.56651 4.38108 2.61245 30 - - 2.67598 4.42855 2.76942 2.72465 3.46984 2.40605 3.73125 3.29353 2.67639 2.69985 4.25320 2.90332 2.74370 3.18365 2.90431 2.37833 2.77619 2.98293 4.59107 3.60533 1.63203 0.98427 0.84222 0.90672 0.51726 0.69117 0.69513 25 1.79846 6.91964 2.82271 2.63877 6.26271 3.20953 5.37547 5.74728 2.52406 1.82819 5.96082 2.36380 5.58163 3.70643 4.60341 2.41196 2.69742 2.58558 7.35352 3.13212 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28392 8.00626 0.61958 0.77255 0.09289 2.42248 26 2.29861 7.42172 1.89525 3.73223 6.76804 3.60759 5.86661 6.25520 2.02739 5.72752 6.46224 2.50968 6.07267 3.49540 3.98809 2.35226 1.13112 5.81307 7.85349 6.44126 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00059 7.82388 8.54623 0.61958 0.77255 0.15990 1.91206 27 4.13566 7.32215 6.33807 5.65911 2.92910 2.78188 3.39063 3.12971 1.54339 4.45388 6.41824 6.04260 6.74784 4.35692 0.65215 5.68043 5.72400 4.36848 7.81408 6.61312 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 28 4.01754 8.37344 0.87061 1.34136 7.68473 6.18817 3.23131 7.21011 2.84275 6.66459 7.45057 2.47960 6.73768 3.45916 6.08403 2.58266 6.01399 6.75084 8.79629 7.30462 39 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 29 3.84446 7.44364 2.00363 1.29315 6.79013 3.65301 2.47134 6.27710 2.08803 5.74953 6.48393 3.86436 6.09644 1.98475 2.75326 3.11440 4.24401 4.78765 7.87548 3.35512 40 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 30 3.87193 8.21388 9.17192 8.62563 6.25064 8.74837 9.04038 2.28345 8.56309 0.20648 5.95522 8.96096 8.50858 8.19162 8.40556 8.24985 7.30862 4.14578 8.67249 3.20650 41 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 31 5.29938 6.66091 7.28040 4.00198 2.90396 6.48613 6.82313 1.76134 2.80627 0.96678 4.39250 6.65237 6.83526 6.57108 3.31484 5.80216 5.53091 1.41689 7.29278 6.12707 42 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 32 1.60189 7.44366 2.37248 2.36122 6.79014 5.70294 3.02135 6.27711 1.87899 5.74954 6.48395 2.11163 2.94761 2.70118 2.58612 2.90392 4.27439 4.49154 7.87550 6.46369 43 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 33 1.89096 7.41091 5.19525 2.85277 6.74226 3.61470 2.81284 3.04013 1.69888 1.75695 3.94123 2.90931 6.10548 3.26667 3.04018 3.44825 2.71164 3.65594 7.85188 4.92914 44 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 34 0.77199 6.87212 7.53307 6.93166 3.71770 6.75968 7.11733 3.92618 6.73042 1.88232 3.28943 6.93021 7.08846 6.84237 6.73508 3.62056 5.76644 1.33744 7.55482 6.39842 45 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 35 4.93291 3.34344 3.80996 3.77794 4.49454 5.70605 5.89239 6.27836 1.30335 4.46534 6.48593 2.91063 6.09945 1.82197 1.46858 2.31022 5.16393 5.83691 7.87708 2.96072 46 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 36 3.25073 7.44356 1.93726 1.94785 6.79003 4.20001 5.88980 6.27699 1.65589 3.22719 6.48385 2.86903 4.23271 3.17259 2.47915 2.06169 3.58836 4.06911 7.87540 2.96088 47 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 37 2.21249 6.72614 6.01744 5.44776 3.07636 3.70134 2.02492 3.20207 5.39361 4.93382 5.83193 1.32104 6.43360 3.31637 3.92571 3.14869 4.15028 3.15690 7.31449 1.61905 48 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00058 7.85709 8.57944 0.61958 0.77255 0.48576 0.95510 38 2.73028 7.35350 3.71982 2.69381 3.08929 5.72996 5.92154 2.15713 2.47470 2.68113 6.40451 4.39754 6.12243 3.50103 3.39563 2.57036 3.34457 5.72322 3.43249 1.21975 49 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00039 7.85691 * 0.61958 0.77255 0.00000 * //