HMMER3/b [3.0 | March 2010] NAME TAT_signal ACC PF10518.4 DESC TAT (twin-arginine translocation) pathway signal sequence LENG 26 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 12:21:31 2012 NSEQ 64 EFFN 64.000000 CKSUM 3943182327 GA 19.90 19.90; TC 19.90 19.90; NC 19.80 19.80; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.8499 0.73868 STATS LOCAL VITERBI -7.4743 0.73868 STATS LOCAL FORWARD -3.4854 0.73868 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 1.65092 4.88139 4.42465 4.69674 3.22898 2.05283 4.82524 3.57739 3.46501 2.09779 3.36957 3.92853 3.56254 4.02111 2.35303 2.54053 2.73965 2.69364 4.78017 5.02194 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.00000 * 1 2.21401 7.34912 2.93980 2.50145 6.69560 2.83484 3.08892 6.18257 2.17809 5.65500 3.94636 2.35676 4.28713 3.18675 2.09308 2.09815 2.76632 2.97988 7.78096 6.36916 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 2 2.86805 4.06005 7.00625 6.38982 2.48269 6.19846 6.53277 2.23668 4.02112 1.57348 2.38544 2.86935 3.03086 6.29960 6.17408 2.70421 4.12384 1.86112 7.02219 2.75183 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 3 3.47315 7.35475 3.29816 4.53091 6.70129 3.23948 3.56816 6.18825 2.68608 5.66057 6.39523 2.07678 6.00670 3.42617 3.48328 0.86213 1.84480 5.74622 7.78644 6.37462 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 4 7.24577 8.93798 8.34246 6.97023 8.82139 7.48137 7.19829 8.03244 2.75589 7.23883 8.19659 7.14320 7.79367 6.33935 0.07644 7.21956 7.25352 7.76808 9.00639 8.14794 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 5 9.20466 9.63425 9.12965 9.15067 9.75939 8.20597 9.64093 10.16722 8.91207 9.19086 10.53997 9.49351 8.82942 9.49025 0.00166 9.60731 9.54708 9.83566 10.02027 9.96249 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 6 3.03963 7.34910 2.10168 3.69567 6.69555 2.80374 2.98096 6.18250 3.65456 3.30731 6.38939 2.25577 6.00197 1.84817 2.56846 2.10119 2.27482 5.74048 2.91639 6.36916 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 7 2.40686 6.47355 7.09116 6.47779 1.17489 2.86329 6.62860 2.88441 6.26232 1.71906 2.52026 6.45711 6.64766 6.38957 6.26608 5.60342 3.66184 1.70377 7.11114 5.93735 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 8 2.84332 8.11172 9.03053 8.45648 2.96640 8.56780 8.82791 2.05872 8.36923 0.51573 2.28026 8.77508 8.34684 8.00290 8.20267 8.03863 7.18352 2.82357 8.50603 7.67794 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 9 2.58197 7.33571 5.09191 3.73098 3.83576 3.27548 4.29171 6.15765 0.91907 2.85969 6.37779 5.08323 6.00699 2.93827 1.58324 3.29046 3.34538 3.96358 7.77142 6.36393 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 10 1.35536 6.40029 7.00564 6.38926 2.34687 1.17290 3.88111 3.25805 6.17083 3.22036 3.81295 6.36551 6.56195 6.29928 6.17386 2.80216 2.74322 3.19954 3.78099 4.27725 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 11 1.55259 6.75757 7.37628 6.86773 2.99184 1.22360 7.05108 5.42628 6.65743 1.90704 3.93610 6.66705 6.77963 6.77401 6.65312 1.77708 2.46639 5.19394 7.60171 6.43666 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 12 1.13315 6.43081 7.03927 6.42728 5.53172 1.53329 6.57454 3.10976 6.21002 1.48613 3.69998 6.39860 6.59101 6.33859 6.21353 3.42577 2.84166 2.92199 7.06511 5.88970 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 13 0.97987 6.42326 7.01162 6.40135 5.52585 1.61621 6.55852 4.86525 6.18678 2.96349 3.38970 6.37675 4.12592 6.31771 6.19501 2.79033 3.96652 1.65642 7.05524 3.59120 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 14 1.19496 4.06988 7.01692 6.40153 5.50371 2.28204 6.54560 3.20506 6.18334 1.80847 3.81101 6.37661 6.57186 6.31184 6.18634 2.99411 2.27570 1.72652 7.03505 5.85937 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 15 1.31128 6.40090 7.00206 6.38598 3.98687 1.41714 6.53224 3.54811 6.16839 3.34736 4.08714 6.36399 2.27132 6.29753 6.17272 2.72257 2.18512 3.34610 2.88405 5.84720 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 16 0.62622 6.40505 7.01153 6.39555 3.64915 2.44197 6.53906 3.76612 6.17718 2.00136 2.97215 6.37124 6.56699 6.30547 6.18007 3.54890 3.23091 2.88049 7.02835 5.85283 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 17 1.02013 2.86466 7.11642 6.52528 5.64756 2.12966 6.67450 4.98471 6.30768 1.82354 2.45169 6.45602 6.62845 6.43279 6.30760 2.97191 2.89693 2.47358 7.17620 6.00285 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 18 1.42039 6.40131 7.00513 6.38897 3.90114 2.34779 6.53359 3.34739 6.17090 2.88124 3.03324 6.36579 2.09592 6.29962 6.17445 2.50727 1.90332 2.02151 7.02362 5.84796 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 19 1.41134 6.40269 6.98329 6.36844 2.60944 1.81838 6.52848 3.78368 3.86493 1.74345 3.13669 6.35539 6.55907 4.12523 6.16555 2.68771 2.49231 2.56956 7.02435 5.84823 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 20 1.98336 6.40094 2.88374 6.38864 2.34298 2.58639 6.53311 3.01971 6.17053 1.20383 2.83369 6.36554 6.56237 6.29923 6.17403 3.95916 2.17529 2.56251 7.02305 5.84739 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 21 1.34967 6.40290 6.98462 6.36977 3.46091 1.08298 3.80430 3.90771 6.15599 3.23663 3.50473 6.35612 2.90059 6.28835 6.16633 2.57292 2.57573 3.33290 7.02472 5.84863 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 22 1.79617 4.19981 5.56983 5.00740 5.97622 1.12216 6.06400 5.35303 3.81931 2.55393 3.28769 3.53929 3.49266 3.51471 3.68495 2.14359 3.41443 3.39354 3.32240 6.09919 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 23 1.79802 3.58604 6.38722 3.81108 2.98984 2.14823 6.38443 2.85928 4.22026 2.52386 2.80183 3.44880 2.22348 3.23990 3.98820 2.72829 3.10276 2.60383 4.09510 5.90810 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 24 1.62489 6.40802 6.93476 6.32310 2.88651 2.57448 6.51905 3.80526 4.04568 1.61377 5.52668 6.33293 3.20942 3.87539 6.14703 2.48133 1.80782 2.40729 7.02897 3.97846 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 25 1.31293 6.83345 4.17779 3.33685 3.84542 1.74637 6.04685 4.14774 3.88362 2.07414 3.99850 5.44498 2.96537 4.07358 4.13756 2.25721 3.71238 2.79744 3.94259 6.11250 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 26 1.57260 3.22463 5.95089 5.38058 5.74819 1.90393 6.23403 5.10491 5.32377 2.38916 3.99410 3.39765 2.06734 3.38914 3.79786 1.98296 2.93917 2.80736 7.21107 5.98829 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00043 7.75436 * 0.61958 0.77255 0.00000 * //