HMMER3/b [3.0 | March 2010] NAME Sed5p ACC PF11416.3 DESC Integral membrane protein Sed5p LENG 29 ALPH amino RF no CS yes MAP yes DATE Fri Oct 5 01:12:30 2012 NSEQ 11 EFFN 7.167725 CKSUM 763305939 GA 21.30 21.30; TC 22.70 21.40; NC 18.60 17.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.6440 0.71993 STATS LOCAL VITERBI -7.2359 0.71993 STATS LOCAL FORWARD -4.5082 0.71993 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.93324 3.82371 3.21421 2.84811 2.89264 3.98994 4.43577 2.74901 2.32385 3.44090 3.67424 2.56682 4.58646 2.29543 2.39340 2.55896 2.46357 2.98996 6.16331 3.58259 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.00000 * 1 2.23076 5.30889 5.50924 5.29068 5.53091 4.19851 5.93640 4.89102 5.18770 4.60885 0.75212 4.94071 5.01842 5.38088 5.28834 1.19084 3.98940 4.35970 6.98175 5.85584 1 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.42786 5.66253 1.06530 0.61958 0.77255 0.48576 0.95510 2 3.08861 4.50956 4.79643 4.20396 3.61679 4.22857 4.57397 2.84950 4.04485 2.06854 2.24543 4.31161 4.60089 4.22787 4.14924 2.28882 1.85503 1.49337 5.15565 3.97341 2 - . 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00789 5.24255 5.96490 0.61958 0.77255 0.14364 2.01139 3 3.85525 6.32319 1.60744 3.24370 5.88761 4.25964 4.84922 5.41830 3.82488 4.89625 5.70171 1.31782 4.87917 4.00212 4.40258 1.27112 2.55960 4.91223 7.03794 5.55220 3 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 4 4.75034 5.90989 6.64423 6.27715 2.08951 6.12888 6.05890 0.33991 6.18430 2.93079 4.39481 6.24509 6.28989 6.11664 6.16305 5.63661 5.00132 3.06679 6.09278 4.56856 4 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 5 4.68246 6.63994 5.52683 4.36609 6.38947 5.12715 4.75273 5.54539 1.12555 4.79411 5.71079 4.61176 5.40248 0.85528 1.90734 4.63454 4.71714 5.26158 6.68150 5.69017 5 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 6 4.56009 7.28833 0.98874 3.36873 6.63013 4.50014 5.27339 6.36218 4.59515 5.76046 6.75595 0.68894 5.24295 4.48597 5.40652 4.35893 4.92248 5.82317 7.80804 6.16665 6 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 7 5.97943 7.18571 6.51025 6.04556 7.05040 5.76803 6.46411 7.02079 4.79958 6.22178 7.33437 6.26754 6.33518 5.79996 0.03877 6.12620 6.24507 6.68063 7.55513 6.93984 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 8 4.51475 6.26179 6.09727 6.13237 6.64341 5.00207 6.84334 6.27504 6.16725 5.92514 6.94037 5.89254 5.81150 6.42427 6.15009 4.74069 0.05906 5.61952 7.65465 6.88387 8 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 9 2.12782 4.69216 5.15713 4.55135 1.80356 4.45304 4.78523 1.34108 4.35964 2.88348 3.81312 4.58393 4.82122 4.51062 4.40552 2.64403 2.50879 2.93525 5.30972 2.71237 9 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 10 5.79287 7.33525 4.85802 0.04313 7.15207 5.48183 6.52897 7.20991 5.80317 6.49414 7.67038 5.50164 6.16949 5.91447 6.17095 5.75749 6.17194 6.77982 7.78722 7.08010 10 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 11 6.10604 7.00837 6.70015 6.75352 0.05575 5.98126 5.76754 5.89547 6.74050 4.95405 6.41537 6.41575 6.51029 6.61186 6.51652 6.19109 6.44240 5.91772 5.85979 4.18084 11 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 12 5.80493 7.14944 5.70068 5.67896 6.77081 5.63840 6.67940 7.04368 5.53253 6.26812 7.46681 6.06952 6.29467 0.03984 5.66122 5.93171 6.20613 6.66194 7.58251 6.77459 12 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 13 2.16387 6.31287 4.52802 3.78531 5.86194 4.70761 4.59126 5.18347 1.91670 4.54241 5.38513 4.19360 5.04917 0.74752 2.12932 4.05335 4.23930 4.82800 6.52938 5.37094 13 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 14 3.52966 0.80986 5.56539 5.21780 5.88898 4.24847 5.83699 5.36337 4.58800 5.02428 5.83567 4.93402 5.06231 5.15953 2.18149 1.16954 4.07366 4.66557 7.16296 6.06269 14 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 15 4.33384 2.34673 6.53565 6.12086 5.07607 6.03636 7.05518 1.92757 6.11442 3.45770 4.75860 6.26269 6.26634 6.42970 6.32038 5.51750 4.60853 0.40644 7.31482 6.03978 15 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 16 1.48599 5.20625 4.29951 3.78477 4.68038 4.16643 4.80164 4.06106 3.76092 1.99357 4.61327 2.74026 4.71499 4.07007 4.13580 1.98308 1.45177 3.74361 6.07455 4.83055 16 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 17 3.36764 5.34225 4.06911 3.53288 4.72890 4.19769 4.60540 2.33990 2.11061 3.76111 4.61794 3.96319 4.67471 3.81406 3.77944 1.18423 1.52823 3.76499 6.05938 4.79083 17 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 18 4.21696 5.50869 5.88144 5.43438 1.78486 5.25131 4.81355 2.16318 5.22610 3.46879 4.57422 5.20291 5.57961 5.21788 5.18961 4.59103 2.15519 3.72262 5.00732 0.78984 18 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 19 3.35785 5.87668 1.54320 2.38140 5.22467 4.06583 4.28487 4.71097 1.67058 4.17708 4.92346 3.52948 4.48773 3.38793 2.21183 1.79917 3.59136 4.27030 6.29819 4.88576 19 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 20 4.49150 6.51544 5.18134 4.22856 6.25031 4.99165 4.74415 5.46717 0.45739 4.75420 5.65179 4.51885 5.31555 3.86723 2.06780 2.15062 4.59019 5.14888 6.66872 5.63357 20 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 21 3.95865 5.89868 4.65894 3.87863 5.21301 4.69286 4.60962 1.83994 1.96476 1.97124 4.96933 4.25169 5.02548 2.47847 1.14736 4.02464 4.12102 4.27539 6.25556 5.09574 21 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 22 3.72329 5.21352 4.94266 4.45409 3.73539 4.74267 4.83333 3.52764 4.32849 2.00484 4.26981 0.72266 5.12735 4.57495 4.52343 4.06281 3.96704 2.45878 5.35028 2.51449 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 23 2.44148 6.55136 5.38144 4.30869 6.30101 5.05160 4.75181 5.48877 0.77183 4.76569 5.67218 4.57166 5.35573 3.87485 1.10312 4.53545 4.64242 5.18504 6.67182 5.65926 23 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 24 2.22869 5.55067 3.67874 3.12715 4.86989 4.09561 4.31890 2.75390 0.99957 3.86477 4.66568 2.63187 4.50432 3.45472 3.48931 3.31911 2.22953 3.92926 6.07511 4.73626 24 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 25 2.44833 5.61322 3.50727 2.95501 2.99930 4.00580 2.97335 4.37319 2.95619 3.90234 4.66898 1.69280 2.86648 1.79637 3.43965 3.20157 2.25559 3.98242 6.07548 4.69277 25 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 26 3.24536 5.75739 2.62989 2.91729 5.10115 2.62897 2.92302 4.58750 2.93995 4.06166 4.80028 1.28734 4.40303 2.58000 2.58480 3.20516 2.25421 4.14772 6.18953 4.77682 26 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 27 1.30686 5.70519 3.46426 2.33818 5.04086 3.99158 4.18241 4.51946 2.40825 4.00621 4.74967 2.66727 2.86580 2.10456 3.40967 3.18575 3.45074 2.73359 6.14365 4.73921 27 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 28 3.21651 5.72281 2.57524 2.90474 5.06514 2.12424 2.96975 4.54993 2.91508 4.02703 4.76476 2.26076 4.38167 1.80623 3.40838 2.23459 2.64374 4.11211 6.15695 3.06406 28 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00517 5.66253 6.38487 0.61958 0.77255 0.48576 0.95510 29 3.24587 5.15965 3.87959 3.31755 4.33566 2.64034 4.38481 2.18024 3.28635 3.39138 4.25615 3.78567 4.53930 1.67171 2.58367 2.58370 2.55611 1.97781 5.71742 4.44600 29 - X 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00349 5.66084 * 0.61958 0.77255 0.00000 * //