HMMER3/b [3.0 | March 2010] NAME HnRNP_M ACC PF11532.3 DESC Heterogeneous nuclear ribonucleoprotein M LENG 30 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 16:08:41 2012 NSEQ 3 EFFN 2.311523 CKSUM 1998487512 GA 20.70 20.70; TC 22.70 23.10; NC 20.30 18.30; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.0214 0.71989 STATS LOCAL VITERBI -7.4391 0.71989 STATS LOCAL FORWARD -3.8466 0.71989 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.40213 5.36844 3.22616 2.29432 3.36910 2.71592 4.01435 4.10805 2.02483 3.88742 4.44241 2.34025 2.48147 3.13677 1.99267 2.64929 3.43288 3.83587 5.82195 3.35417 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.00000 * 1 3.44272 6.16636 1.38112 1.45038 5.43696 3.62846 4.21057 5.00493 3.29005 4.44551 5.30153 1.48527 4.27773 3.37667 3.94634 3.28793 3.73898 4.53073 6.58740 5.01097 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 2 3.13134 5.40991 3.37390 2.85424 4.86355 1.79538 3.93749 4.27976 2.41675 3.74654 4.55981 3.33410 4.21913 1.71241 1.68271 3.11761 3.35380 3.89679 5.83274 4.55655 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 3 2.93098 4.92818 3.48187 2.95381 4.25041 3.73641 4.01858 3.50747 1.61650 3.23778 4.11797 3.40514 2.07628 3.20930 3.04921 3.02966 3.18808 1.81656 5.54478 4.27587 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 4 2.77251 4.86779 3.38366 3.03173 4.75452 3.47667 4.27946 4.20747 3.13806 3.80787 4.60311 1.67490 4.11087 3.45569 3.56445 1.49948 1.71120 3.70178 6.00147 4.69260 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 5 3.27925 5.62508 2.90454 2.73103 4.97364 3.72148 4.13733 4.57055 2.85797 4.04712 4.89627 1.55861 4.28370 1.07699 3.24125 3.22947 3.55903 4.15533 6.09578 4.69805 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 6 3.34937 5.58653 2.98474 2.84125 4.38223 3.77917 1.61086 4.54463 3.03863 4.02452 4.92108 1.02121 4.35872 3.43917 3.42588 3.31517 3.64525 4.15603 5.75214 4.22374 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 7 3.56056 6.29262 1.33265 0.83246 5.56242 3.65707 4.29792 5.15338 3.44484 4.59368 5.49029 3.10386 4.33786 3.47889 4.13576 3.38782 3.87281 4.67615 6.72106 5.12906 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 8 3.12123 5.29111 3.43310 3.00284 4.93207 3.75288 4.09426 4.36550 1.00732 3.86370 4.69371 3.44391 4.26530 3.23897 2.87079 1.57294 3.41089 3.94456 5.94379 4.68023 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 9 4.27492 5.89350 4.86602 4.28474 5.49242 4.48714 4.83864 5.17758 3.09183 4.53208 5.56567 4.55116 5.00108 4.07047 0.22271 4.35879 4.51680 4.87352 6.25406 5.31305 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 10 4.06233 5.86875 4.29078 3.83328 5.47590 4.35080 4.59588 4.99972 0.28440 4.39890 5.38083 4.18879 4.84449 3.78669 3.02977 4.09013 4.28027 4.68339 6.21057 5.20454 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 11 4.06023 6.09479 3.26417 0.25401 5.61365 4.11118 4.88027 5.29278 3.91386 4.78091 5.80716 3.83743 4.77605 4.13410 4.35802 3.99533 4.39790 4.91053 6.58270 5.44515 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 12 3.78876 5.81130 4.44217 3.49631 5.46239 4.29158 4.02705 4.70273 0.82601 4.00853 4.90832 3.79914 4.60220 3.15184 1.26466 3.75535 3.87561 4.39953 5.93285 4.88693 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 13 2.92987 5.06718 3.12663 2.95153 5.00302 1.60769 4.36588 4.50063 3.28859 4.06873 4.87333 1.68129 1.61636 3.54947 3.74436 2.99810 3.33961 3.95273 6.22297 4.88206 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 14 3.11021 4.56044 4.60241 4.04649 3.52003 4.23219 4.61583 1.62141 3.90000 2.23514 1.79498 4.25782 1.87228 4.13142 4.07428 3.55474 3.35859 2.45752 5.23377 4.06797 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 15 4.06233 5.86875 4.29078 3.83328 5.47590 4.35080 4.59588 4.99972 0.28440 4.39890 5.38083 4.18879 4.84449 3.78669 3.02977 4.09013 4.28027 4.68339 6.21057 5.20454 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 16 3.81442 5.81883 4.49029 3.52512 5.47688 4.30764 4.03386 4.71186 1.24170 4.01524 4.91944 3.81844 4.61666 3.15958 0.82980 3.78218 3.89659 4.41287 5.93607 4.89791 16 - - 2.68626 4.42233 2.77528 2.73131 3.46362 2.40428 3.72503 3.29362 2.67749 2.69363 4.24698 2.90355 2.73748 3.18155 2.89809 2.37895 2.77528 2.98527 4.58485 3.61511 0.32708 1.29214 5.45143 0.12595 2.13422 0.48576 0.95510 17 2.72856 4.67473 4.03783 3.93995 5.22092 0.80161 5.05887 4.75324 4.17320 4.41045 5.19462 3.94858 4.22792 4.37361 4.41976 1.32795 3.28128 3.96629 6.52017 5.36798 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 18 2.72856 4.67473 4.03783 3.93995 5.22092 0.80161 5.05887 4.75324 4.17320 4.41045 5.19462 3.94858 4.22792 4.37361 4.41976 1.32795 3.28128 3.96629 6.52017 5.36798 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 19 3.13035 5.21046 3.16805 3.12173 5.22693 1.40902 4.62509 4.83718 3.63860 4.40390 5.24975 0.88715 4.34554 3.85350 4.07387 3.20481 3.58338 4.23392 6.43551 5.12194 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 20 4.27492 5.89350 4.86602 4.28474 5.49242 4.48714 4.83864 5.17758 3.09183 4.53208 5.56567 4.55116 5.00108 4.07047 0.22271 4.35879 4.51680 4.87352 6.25406 5.31305 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 21 4.56454 5.72184 5.44924 5.37394 0.25149 4.90682 4.56201 4.09145 5.29003 3.28275 4.71599 5.10720 5.38819 5.23883 5.19876 4.73959 4.88594 4.13097 4.67507 2.98523 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 22 4.06023 6.09479 3.26417 0.25401 5.61365 4.11118 4.88027 5.29278 3.91386 4.78091 5.80716 3.83743 4.77605 4.13410 4.35802 3.99533 4.39790 4.91053 6.58270 5.44515 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 23 4.23250 5.75948 4.92249 4.91675 5.73413 4.40460 5.84173 5.60593 5.06539 5.07918 6.20794 5.11763 0.12299 5.41453 5.14202 4.44041 4.73964 5.13260 6.59419 5.88600 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 24 4.66327 5.80180 5.19266 5.12783 2.81809 4.89817 4.33864 4.60247 4.98386 3.82403 5.18521 4.90785 5.37577 5.05544 4.96377 4.68735 4.96519 4.51549 4.47179 0.23879 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.30179 4.72908 1.37963 0.61958 0.77255 0.48576 0.95510 25 2.70696 4.61592 3.83432 3.71723 4.72862 3.34138 4.78583 4.35241 3.83495 4.03725 4.93386 3.81205 4.13331 4.13854 4.07143 0.47611 3.23564 3.74849 6.05564 4.82885 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01759 4.44488 5.16723 0.61958 0.77255 0.28922 1.38169 26 3.76283 5.64664 3.62248 3.62404 5.18832 4.04356 5.02323 5.18647 4.06641 4.72803 5.73705 0.26331 4.75676 4.36516 4.39496 3.83563 4.20604 4.70370 6.36327 5.12696 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 27 4.23250 5.75948 4.92249 4.91675 5.73413 4.40460 5.84173 5.60593 5.06539 5.07918 6.20794 5.11763 0.12299 5.41453 5.14202 4.44041 4.73964 5.13260 6.59419 5.88600 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 28 2.94738 5.27769 3.01406 2.63931 4.68897 3.61203 3.94325 4.14772 2.68778 3.67876 4.47358 1.74560 4.09280 1.77637 3.12619 2.93760 1.89397 3.74474 5.83983 4.46894 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 29 3.78656 5.81009 4.43624 3.49405 5.45997 4.28987 4.02725 4.70151 0.79817 4.00804 4.90761 3.79779 4.60117 3.15210 1.31082 3.75328 3.87417 4.39800 5.93281 4.88605 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01321 4.72908 5.45143 0.61958 0.77255 0.48576 0.95510 30 4.27492 5.89350 4.86602 4.28474 5.49242 4.48714 4.83864 5.17758 3.09183 4.53208 5.56567 4.55116 5.00108 4.07047 0.22271 4.35879 4.51680 4.87352 6.25406 5.31305 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00891 4.72478 * 0.61958 0.77255 0.00000 * //