Summary: Aluminium activated malate transporter
Aluminium activated malate transporter Provide feedback
No Pfam abstract.
Hoekenga OA, Maron LG, Pineros MA, Cancado GM, Shaff J, Kobayashi Y, Ryan PR, Dong B, Delhaize E, Sasaki T, Matsumoto H, Yamamoto Y, Koyama H, Kochian LV; , Proc Natl Acad Sci U S A. 2006;103:9738-9743.: AtALMT1, which encodes a malate transporter, is identified as one of several genes critical for aluminum tolerance in Arabidopsis. PUBMED:16740662 EPMC:16740662
Sasaki T, Yamamoto Y, Ezaki B, Katsuhara M, Ahn SJ, Ryan PR, Delhaize E, Matsumoto H;, Plant J. 2004;37:645-653.: A wheat gene encoding an aluminum-activated malate transporter. PUBMED:14871306 EPMC:14871306
Internal database links
|Similarity to PfamA using HHSearch:||FUSC FUSC_2|
External database links
|Transporter classification:||9.B.24 9.B.4|
This tab holds annotation information from the InterPro database.
InterPro entry IPR020966This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana [PUBMED:16740662, PUBMED:17885092, PUBMED:18826429, PUBMED:19321711]. Some family members have been reported to permeable to chloride, nitrate, sulphate and malate [PUBMED:14871306, PUBMED:16391684, PUBMED:15769806, PUBMED:18550686].
The mapping between Pfam and Gene Ontology is provided by InterPro. If you use this data please cite InterPro.
|Biological process||malate transport (GO:0015743)|
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Curation and family details
|Seed source:||Bateman A|
|Number in seed:||18|
|Number in full:||320|
|Average length of the domain:||327.50 aa|
|Average identity of full alignment:||31 %|
|Average coverage of the sequence by the domain:||66.11 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||3|
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