HMMER3/b [3.0 | March 2010] NAME zf-C2H2_jaz ACC PF12171.3 DESC Zinc-finger double-stranded RNA-binding LENG 27 ALPH amino RF no CS yes MAP yes DATE Sun Oct 7 04:35:42 2012 NSEQ 140 EFFN 140.000000 CKSUM 1857394719 GA 22.60 22.60; TC 22.60 22.60; NC 22.50 22.50; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.0756 0.72331 STATS LOCAL VITERBI -7.2412 0.72331 STATS LOCAL FORWARD -3.7093 0.72331 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.93394 2.61500 3.21086 2.93691 2.94878 3.59873 2.35239 3.38264 2.09726 2.91451 4.09448 3.06713 4.41767 2.87648 2.94681 2.65365 3.18947 3.30391 4.80644 2.92277 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.00000 * 1 2.46066 4.79466 3.79522 2.92579 7.42471 2.97104 3.63834 3.28635 2.31963 4.01045 4.85183 3.17060 3.02376 1.46980 2.24531 2.64052 3.80126 3.07264 8.51064 3.73658 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 2 4.68242 7.14881 4.40922 7.08066 0.97405 6.93324 2.52399 3.11560 4.30990 2.17998 4.81901 3.74780 3.65957 7.01248 4.28263 3.43881 4.67989 4.00131 3.79519 1.64398 2 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 3 4.10075 7.51486 3.88461 2.88153 2.67632 6.58885 4.86225 3.24909 3.17550 4.52319 4.24999 3.43650 4.98922 6.08506 3.79658 3.66619 3.68099 2.47967 4.50338 0.66682 3 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 4 2.92698 0.05742 9.55683 9.63704 9.94713 7.94083 10.02780 9.75691 9.60259 9.27190 10.15223 9.02556 8.76498 9.70458 9.40843 7.68758 8.04697 8.80802 10.72696 10.27627 4 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 5 3.73797 4.43198 2.28852 2.13575 3.70682 4.61681 4.34145 2.33583 2.36637 2.56741 5.09138 4.17597 2.99903 2.77892 4.83869 3.67336 3.05405 1.59696 8.45494 4.31691 5 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 6 1.58061 7.16216 4.76097 2.83944 3.65980 6.91561 2.59337 2.37646 6.78958 1.65261 4.28348 4.44442 3.74187 4.68838 6.85007 3.95368 2.86167 2.37496 7.78152 2.20722 6 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 7 7.83196 0.05670 9.66769 9.75080 10.10711 8.19311 10.17208 10.03291 9.76957 9.46885 10.43141 9.31710 8.98524 9.91687 9.56050 8.07452 2.93297 9.14735 10.75472 10.41270 7 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 8 2.30429 8.08851 1.10546 2.82425 7.43480 2.59512 4.35202 6.92199 2.83312 6.39431 7.12901 1.87442 4.02023 2.65918 3.25662 2.60946 5.80524 6.47984 8.52028 7.10801 8 - T 2.68694 4.42301 2.77596 2.73199 3.46430 2.40300 3.72571 3.29430 2.67460 2.69431 4.24766 2.89957 2.73816 3.18222 2.89877 2.37963 2.77596 2.98594 4.58553 3.61579 0.05599 2.91226 9.25266 0.01696 4.08544 0.48576 0.95510 9 3.29376 3.86988 7.50065 4.32127 6.27012 6.90359 7.22405 2.25756 0.77577 3.92479 4.40516 6.98872 7.26957 6.90217 1.41690 4.23066 4.79821 3.03802 7.79178 4.47152 10 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 10 4.04180 8.05127 3.94028 3.10737 4.11421 2.98466 2.82676 3.14395 3.40719 3.90965 3.14349 3.34445 4.73876 2.32053 2.57029 2.86785 2.42082 2.77067 2.98422 1.74414 11 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 11 4.19827 3.61895 7.75820 7.14191 0.49945 6.95012 7.28466 3.11781 6.92338 2.12459 3.39705 7.11775 7.31312 7.05122 6.92588 4.25342 4.37861 3.49569 7.77295 2.41444 12 - B 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 12 2.81014 8.07888 3.75591 2.80144 4.85613 3.70202 3.44993 2.32178 1.57307 3.93752 7.11922 2.45438 4.35587 3.00575 2.95603 1.95453 2.49470 3.54950 8.51085 4.42205 13 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 13 5.58342 8.09842 2.22678 3.49408 7.44468 2.94039 2.59219 6.93194 2.58986 6.40405 4.89953 1.94255 6.74755 5.63823 3.25903 1.29338 1.70970 6.48977 8.52991 7.11744 14 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 14 2.29831 8.07903 2.07122 1.23977 4.91701 5.02199 3.24992 3.96300 3.39610 4.21718 3.42127 3.72536 3.50298 2.37511 2.61662 2.77106 3.73638 3.75336 8.51096 7.09924 15 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 15 2.18945 8.07840 3.94969 2.46082 5.18936 4.00495 3.26323 3.74476 2.14204 3.26298 3.95479 1.81721 6.73240 2.48180 2.90403 1.93729 3.22466 4.42571 8.51051 3.71182 16 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 16 1.82297 8.06568 2.84895 2.69101 4.26654 2.83151 4.77174 4.61792 3.97473 2.84268 4.22734 3.19996 6.73600 1.60979 4.52518 2.42243 2.47514 2.34561 8.50139 4.83808 17 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 17 2.28878 7.14325 7.74935 7.13292 1.78640 6.94151 3.99601 3.98649 3.77668 1.14740 2.93178 7.10882 7.30506 4.03440 4.52145 6.25343 6.00283 3.79079 2.27308 1.98473 18 - H 2.68803 4.42410 2.77704 2.73308 3.46539 2.39677 3.72679 3.29539 2.67926 2.69540 4.24875 2.90532 2.73924 3.18331 2.88320 2.38072 2.77704 2.98703 4.58662 3.61688 0.06830 2.71930 9.25266 0.69198 0.69432 0.48576 0.95510 18 3.91425 8.07922 1.96103 1.68751 7.42564 4.27694 3.75423 4.01285 1.65591 3.06848 4.46992 3.97680 4.26198 2.07805 2.46940 3.90162 3.30668 3.02249 8.51109 7.09932 21 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 19 2.19464 8.07773 3.23428 2.50578 4.88881 3.32941 6.52609 4.48161 2.62683 3.60180 4.55752 1.75111 6.73258 1.82937 2.95547 2.22898 2.74610 3.36461 8.51003 4.93908 22 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 20 10.13332 10.44096 9.92955 10.02248 10.46060 9.01144 0.00071 11.03420 10.21994 10.03291 11.42948 10.39371 9.63896 10.53855 9.95418 10.59722 10.48785 10.71924 10.79605 10.66331 23 - C 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 21 5.76849 4.24437 7.70246 2.18740 2.58689 6.93457 4.73009 1.89663 2.62946 1.67069 1.84831 5.03206 7.29856 3.34961 3.55361 6.24457 3.75710 2.96080 4.62258 2.82704 24 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 22 3.25733 8.07921 3.79040 3.79205 7.42563 6.33867 2.64431 4.48792 1.21220 3.44050 7.11951 1.87562 5.02831 3.03379 2.20919 2.15528 3.10292 4.41005 8.51108 4.59286 25 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 23 7.12905 9.78320 5.98983 3.27913 9.32919 1.28016 7.92786 8.94787 4.57587 8.35773 9.30327 4.28090 7.90367 4.69894 7.82061 0.71190 1.86455 8.38442 10.48867 8.84892 26 - S 2.68808 4.42415 2.76430 2.73313 3.46543 2.40702 3.72684 3.29544 2.67930 2.69544 4.24879 2.90536 2.73929 3.18336 2.89990 2.37758 2.77709 2.98708 4.58667 3.58756 0.08139 2.55020 9.25266 0.54979 0.86055 0.48576 0.95510 24 4.07437 8.07957 4.28853 3.40000 7.42607 4.73633 2.88000 6.91301 0.53412 4.17768 7.11987 3.43975 6.73240 3.81743 2.00387 3.46979 3.35389 4.64511 8.51138 7.09962 29 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 25 2.11125 4.03136 4.73847 4.35860 7.40543 3.78531 6.53030 3.80853 1.19903 3.04671 7.10749 2.99122 2.93644 2.53362 2.22272 2.69496 5.79819 3.03507 3.96452 4.25079 30 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 26 9.38130 10.00243 9.66517 9.74668 6.91929 9.00933 0.05830 9.21254 9.70554 8.23818 9.67569 9.27594 9.48617 9.47973 9.43355 9.27732 9.62069 9.14960 8.54907 2.91884 31 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53031 9.25266 0.61958 0.77255 0.48576 0.95510 27 4.16569 7.91075 6.56349 5.95030 4.63193 6.80726 6.93933 3.56434 0.64346 2.51118 6.99804 3.41226 7.17855 2.08371 1.90916 4.48162 6.16842 4.45654 8.40818 7.15822 32 - H 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00020 8.53021 * 0.61958 0.77255 0.00000 * //