HMMER3/b [3.0 | March 2010] NAME ESPR ACC PF13018.1 DESC Extended Signal Peptide of Type V secretion system LENG 24 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 08:57:07 2012 NSEQ 290 EFFN 180.918121 CKSUM 655245980 GA 20.00 20.00; TC 20.00 20.00; NC 19.90 19.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -6.4584 0.72020 STATS LOCAL VITERBI -6.7007 0.72020 STATS LOCAL FORWARD -4.3050 0.72020 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.56523 4.08608 4.56170 2.98800 3.49585 3.66598 4.01142 2.62935 2.47529 2.76996 3.07455 2.51876 4.68423 3.38552 2.55639 2.63802 2.90333 2.23242 3.48248 3.20088 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.00000 * 1 9.38037 10.42427 9.96356 10.05115 10.40832 9.04169 10.61328 10.88553 10.27088 10.00656 0.03229 3.47422 9.72134 10.53244 10.07061 9.66718 9.88248 10.37568 10.98048 10.57846 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 2 7.28821 9.60983 6.48743 6.58067 9.34320 7.46527 4.16442 9.27353 7.54574 8.70007 9.64836 0.04772 8.23517 4.14196 8.10873 4.74906 7.73259 8.59621 10.60886 9.03763 2 - - 2.68374 4.42286 2.77580 2.73184 3.46415 2.40574 3.72555 3.29415 2.67802 2.69416 4.24751 2.90026 2.73800 3.18207 2.89862 2.37739 2.77580 2.98579 4.58538 3.61564 0.06684 3.38890 3.47675 0.02104 3.87199 0.48576 0.95510 3 5.12746 5.15505 9.07043 7.52258 9.49858 8.20452 2.65639 8.58570 0.73651 7.80171 8.74023 4.78535 8.45054 3.99706 0.94103 7.77172 3.93710 8.32783 9.66329 8.72326 4 - - 2.68857 4.42464 2.77615 2.72695 3.46301 2.40752 3.70556 3.29593 2.67857 2.69411 4.24929 2.90188 2.73979 3.18046 2.89794 2.38126 2.77634 2.98757 4.58716 3.60026 0.14629 1.99500 9.47640 0.00551 5.20380 0.08302 2.52995 4 2.48691 2.44706 7.99837 7.38188 5.23590 7.18988 5.67414 0.67792 7.16314 2.64639 5.00502 5.03903 4.73851 7.29133 5.15721 3.15393 2.51821 2.47168 5.71864 6.83783 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 5 9.04159 9.77996 9.64892 9.72477 1.62856 9.31160 4.16146 8.54892 9.47924 7.57563 9.02101 8.75976 9.54026 8.97732 9.17566 1.95323 9.21124 8.52679 7.84047 0.44014 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 6 3.35277 8.34652 4.76782 5.52831 7.69552 5.35838 4.74312 5.38126 1.05349 6.65100 7.38716 3.12892 7.00070 4.09556 0.73424 3.66015 4.92172 4.80366 8.77465 7.36709 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 7 4.72836 7.42144 8.02789 7.41273 6.51996 7.22360 7.56279 1.98654 4.12795 1.18129 6.54349 5.40048 7.58741 7.32494 4.74445 2.97484 2.66197 0.94493 8.05404 6.87800 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 8 7.36792 8.50056 9.59780 9.21362 8.15838 9.25217 10.49245 0.38035 3.34059 4.12463 7.78064 9.43019 9.39439 9.66157 9.54125 4.99133 7.63789 1.36544 10.61828 9.28642 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 9 9.04664 9.78106 9.65025 9.72598 1.02331 9.31502 7.78013 8.54751 9.47944 4.66457 9.01948 8.76022 9.54169 8.97726 4.81836 8.74067 9.21423 8.52641 0.77129 1.84095 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 10 7.19487 3.22488 4.76932 6.50377 9.58121 3.92690 4.82564 9.20538 7.68462 3.72849 9.59922 0.66866 8.17047 5.18032 8.41967 0.97356 7.64800 8.51092 10.82171 9.23905 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 11 2.37870 5.64774 3.97024 2.12416 7.67185 6.58472 2.93875 5.41729 1.39452 6.63126 7.36567 1.89089 4.51303 3.46432 1.81123 4.06754 3.26632 3.56844 8.75723 4.13471 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 12 1.20392 3.40251 3.86921 4.64255 7.62063 6.59522 4.63995 3.91981 2.76323 4.65044 5.69209 4.93564 5.53364 4.53130 3.20780 2.17166 1.33480 2.42538 8.73213 7.33032 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 13 4.14817 8.02854 6.28506 5.72596 7.25786 6.70092 4.48165 3.35958 2.42571 1.86218 4.75099 4.52155 5.60347 1.69363 1.13317 4.07995 2.02500 4.81472 8.53695 7.21043 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 14 4.21249 4.50669 5.04538 3.15262 5.17426 1.08796 4.03234 7.15904 1.90713 6.63147 5.35640 2.11135 6.97842 1.77013 2.49322 3.50612 6.04282 6.71700 8.75742 7.34565 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 15 1.73872 1.77150 3.59033 4.30721 7.55978 4.07374 6.79949 4.25277 3.38080 2.50236 3.22669 4.86992 7.00120 1.75107 3.30707 3.01541 2.19099 3.11949 8.70146 7.31165 17 - - 2.70156 4.43763 2.79058 2.70772 3.39965 2.42051 3.74033 3.30892 2.62031 2.67145 4.26228 2.87281 2.75278 3.19684 2.91339 2.39425 2.79058 3.00056 4.60015 3.63041 0.15349 1.95043 9.50772 1.78763 0.18315 0.48576 0.95510 16 6.01896 4.49914 7.99837 7.38189 2.82070 7.18991 4.81888 4.74203 3.72106 1.17458 3.48670 7.35747 5.48612 5.26272 5.11363 6.50185 4.86588 2.79413 1.17738 1.89592 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 17 4.48162 5.25433 5.38933 4.44680 6.55327 7.11205 7.42054 2.19568 4.64801 1.94984 2.38289 3.47083 7.48049 2.24678 4.72570 4.31636 3.05790 0.91390 8.06587 6.87736 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 18 0.89876 5.14464 9.26620 9.28283 9.17176 7.32112 9.63187 4.60353 9.09400 8.04501 9.01120 8.30218 3.61271 9.11167 8.97969 3.68936 7.15664 0.64972 10.72164 9.71590 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 19 1.95562 4.18313 9.07048 8.57151 7.61789 5.15838 9.05463 1.91599 3.73360 4.95486 7.43725 8.61302 8.70750 8.67443 8.55262 7.78516 2.51353 0.55265 9.47334 8.25563 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 20 2.61533 5.57013 4.37764 3.98654 7.67029 3.66158 4.73330 7.15686 5.50651 4.78770 7.36481 5.02540 3.70924 3.39549 3.55540 0.52867 1.96595 6.71546 8.75654 3.95148 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 21 7.56345 10.49343 4.26108 0.07782 9.72903 7.45411 8.21147 9.39873 3.56992 8.78232 9.79466 6.88905 8.20378 7.41798 8.40450 3.92532 7.91797 4.76602 10.93270 9.18546 29 - - 2.69342 4.42949 2.78243 2.73847 3.47077 2.39219 3.73218 3.25302 2.68464 2.70078 4.25413 2.91070 2.73088 3.18870 2.90524 2.36669 2.78243 2.99242 4.59201 3.58950 0.14520 2.30251 3.34826 1.38175 0.28920 0.48576 0.95510 22 4.02843 4.56779 5.17462 4.87462 2.39544 3.35923 3.42664 2.37332 4.89586 1.06295 5.12489 2.76507 7.48765 5.45873 3.81983 4.01056 2.69960 1.79509 7.99996 5.02455 34 - - 2.69076 4.40734 2.74294 2.74041 3.47425 2.41012 3.72986 3.22920 2.68493 2.70426 4.24267 2.89744 2.74656 3.19218 2.90355 2.38482 2.76709 2.99037 4.59548 3.62575 0.36704 1.18045 9.47201 0.69294 0.69335 0.07454 2.63340 23 0.83392 5.48977 4.55222 4.61216 7.61126 3.92840 1.97465 4.35526 3.79166 4.83523 5.41965 4.63906 6.99026 4.86706 4.26479 2.54628 1.67986 3.31391 8.72747 7.32750 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00023 8.78537 9.50772 0.61958 0.77255 0.48576 0.95510 24 3.25451 5.24993 6.07346 5.51680 7.67137 4.56706 3.87342 4.92838 0.74680 6.63106 7.36829 4.61379 3.87800 4.50145 1.21273 3.15975 3.11073 4.79952 8.75933 7.35110 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00015 8.78530 * 0.61958 0.77255 0.00000 * //