HMMER3/b [3.0 | March 2010] NAME PepSY_TM_1 ACC PF13172.1 DESC PepSY-associated TM helix LENG 34 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 12:08:18 2012 NSEQ 183 EFFN 183.000000 CKSUM 3111744183 GA 22.90 3.00; TC 22.90 4.30; NC 22.80 -999999.99; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.3381 0.72329 STATS LOCAL VITERBI -7.3097 0.72329 STATS LOCAL FORWARD -4.1002 0.72329 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.60861 4.37158 4.27755 4.52270 2.57556 2.60391 3.12969 2.38054 3.45191 1.73625 3.62554 3.87172 4.09093 4.35992 3.09428 2.81372 2.81083 2.64842 3.20202 3.19524 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.00000 * 1 3.36181 8.18995 4.88135 4.16743 2.12816 2.77640 4.20877 2.67108 2.14252 2.01988 4.37232 3.54367 4.67371 3.59034 2.41541 3.07169 2.41157 3.31649 2.52780 5.01124 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 2 3.92452 8.32608 3.54367 3.18273 3.89080 3.05154 3.19486 3.64530 1.97293 2.25095 4.28316 3.29410 5.05929 3.28992 1.57500 2.81419 4.34084 3.82815 4.78555 2.07238 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 3 3.01441 8.27773 3.23541 5.54796 3.89029 4.18779 4.77182 3.01837 1.18347 3.40585 4.06398 2.88085 4.83531 3.72771 1.57975 2.67134 3.05596 4.90546 4.47699 3.54815 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 4 2.36853 7.53812 7.20138 5.03164 1.69198 3.94501 4.21977 2.52561 3.18441 1.78259 6.64950 4.29797 4.21618 2.92549 3.86417 4.87998 2.10589 3.37590 2.30645 3.75699 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 5 2.36399 7.40288 8.00658 4.82905 2.20035 4.87298 4.32144 2.49063 4.39324 1.44723 2.81630 3.34780 7.56419 7.30092 7.17574 2.84132 3.45518 2.44269 1.96451 3.87008 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 6 3.95149 7.45990 7.57349 6.98163 2.72466 3.84853 3.43758 4.19087 3.68077 3.04375 3.86849 3.76900 7.49564 2.66503 1.02097 2.87383 4.89596 3.17108 2.02350 2.82565 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 7 3.01904 8.32058 2.04793 5.52303 4.82149 4.77340 4.66699 4.03672 2.07477 3.14335 7.36284 2.87129 5.06054 2.16229 1.62853 2.91578 3.00570 3.86952 3.18208 2.73781 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 8 3.53454 4.58464 8.00965 7.39316 3.27427 3.92445 7.53544 1.85392 7.17440 1.09969 3.89297 7.36869 7.56464 7.30257 7.17692 3.57947 3.30680 2.51802 1.72283 2.74100 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 9 10.41830 10.71194 10.20222 10.29543 10.76551 9.28159 0.00054 11.31118 10.49325 10.30794 11.70609 10.67034 9.90870 10.81295 10.22552 10.88955 10.76988 10.99813 11.07291 10.98083 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 10 3.35416 7.40588 7.97773 7.36339 2.08254 3.77562 7.52930 2.24711 3.36960 1.75773 4.82649 3.33760 7.56037 4.97739 1.57633 3.99741 3.01518 2.54666 2.31896 6.85112 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 11 3.56579 7.40459 2.79288 3.65534 3.25754 7.19828 7.53167 2.39670 7.16037 2.99450 4.05660 4.59815 7.56201 4.40030 7.16956 3.48225 3.47122 2.28520 1.65205 1.18343 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 12 1.86229 4.41799 8.01281 7.39649 3.04570 3.65391 7.53916 2.27324 7.17787 0.97853 3.94170 7.37210 7.56788 7.30611 7.18048 2.33713 2.62113 2.46054 8.02822 6.85260 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 13 2.49335 8.43943 9.24388 9.31270 9.46597 0.54636 9.60489 9.00621 9.10774 8.69879 9.39530 8.24468 8.13863 9.09273 8.96146 1.12771 4.39927 7.94323 10.79989 9.85920 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 14 2.25634 7.40261 8.00928 7.39281 2.90370 3.52268 7.53533 2.38466 3.98040 1.02360 2.35500 7.36849 7.56455 7.30235 2.63464 4.27598 3.44792 2.62257 8.02460 2.96377 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 15 2.64364 5.00576 8.00961 7.39312 1.58303 4.49800 7.53540 1.78731 7.17436 1.76055 4.97095 7.36864 4.26866 7.30253 7.17687 3.42099 3.31013 1.99680 2.19234 3.70962 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 16 2.01734 1.92257 8.00963 7.39314 2.19374 3.03179 7.53543 2.65579 7.17438 1.97769 3.71723 7.36867 5.02342 7.30256 7.17690 2.04715 3.02896 2.07865 8.02460 4.24699 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 17 1.91822 3.44844 8.00979 7.39330 2.37600 2.31445 7.53560 2.88643 7.17455 1.15961 3.68341 7.36883 7.56477 7.30272 7.17706 2.54912 2.79050 2.55467 4.42951 6.84916 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 18 2.27972 7.40298 8.01006 7.39359 4.32519 2.49066 7.53594 1.90609 7.17486 1.80042 4.75520 7.36913 1.50378 7.30304 7.17738 3.95305 3.12423 1.78400 3.92706 6.84949 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 19 3.17809 5.16413 8.00958 7.39309 1.40324 2.69894 4.78424 1.95985 7.17433 1.99718 3.37725 4.20656 2.06437 7.30251 7.17685 4.57539 4.27384 2.19556 3.24658 6.84896 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 20 3.12138 4.87771 8.00963 7.39314 2.93689 3.20136 3.92621 2.11544 7.17438 0.88579 2.10099 7.36867 7.56462 7.30255 7.17689 4.67323 3.51534 2.17438 8.02459 3.81023 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 21 2.98126 4.35191 8.11375 7.50173 2.04470 7.31410 7.65602 1.72074 7.28744 0.75645 3.74532 7.48195 7.67202 7.41623 7.29239 4.24138 3.97232 2.34720 8.13875 6.96401 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 22 3.26178 7.40307 8.01018 7.39371 2.35376 4.98312 7.53606 1.17365 7.17498 1.21355 2.88701 5.10853 7.56518 7.30316 7.17750 4.01041 4.27387 1.91425 5.07118 6.84960 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 23 3.15234 7.40586 8.01335 4.59441 1.45300 7.20508 7.53966 1.82879 7.17839 1.52728 2.75015 7.37269 7.56843 7.30655 7.18097 4.60100 4.25413 1.99399 8.02857 2.25053 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 24 0.75181 2.20460 9.25090 9.31030 9.41802 2.15689 9.58999 4.08376 9.09539 8.63903 9.35034 8.24339 8.13710 9.08321 8.94992 1.62793 2.65931 4.03157 10.76274 9.81191 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 25 2.75332 4.73808 8.03767 7.42251 2.85631 4.93202 7.56828 1.23271 7.20502 1.28086 3.80776 7.39926 7.59387 7.33378 7.20839 6.54440 4.89983 1.45230 8.05621 3.75432 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 26 6.74979 8.64521 9.33250 9.40420 9.62328 7.43923 9.75007 9.21033 9.25998 8.87700 9.59989 8.44448 8.32555 9.26488 9.11449 1.28007 0.33082 8.16217 10.84710 9.99786 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 27 3.34305 8.46654 9.22633 9.29662 9.48690 0.06056 9.61932 9.03240 9.12193 8.72164 9.42153 8.26565 8.16238 9.10840 8.98007 3.88992 7.16110 7.97147 10.80671 9.87641 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 28 2.31068 3.17307 8.01456 7.39834 2.95712 2.88176 7.54126 1.44178 7.17981 1.40807 3.92610 7.37404 7.56976 7.30812 7.18249 2.68288 2.79969 2.16541 8.03028 6.85462 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 29 2.37026 4.40578 8.00961 7.39312 3.08248 4.05824 7.53539 2.10650 7.17436 1.39642 3.20720 7.36864 3.69581 7.30253 7.17687 4.19114 2.01405 2.63553 2.92367 2.13317 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 30 7.79357 8.97725 9.76587 9.16835 3.39051 9.16627 9.33389 3.00125 9.02212 0.61115 2.36648 9.34363 9.11989 8.76270 8.88455 8.56447 4.31946 3.73986 2.93422 1.67070 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 31 2.71700 4.20615 8.00877 7.39234 4.13919 3.12580 7.53529 2.48017 7.17378 1.82491 3.53602 1.25282 7.56453 4.68635 7.17660 1.92603 3.31687 2.27043 8.02471 6.84909 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 32 3.10163 7.40287 8.00665 4.59407 1.20752 3.41494 1.41480 3.49546 7.17224 2.19303 4.63029 4.65713 7.56420 7.30096 4.72321 4.72137 4.63785 3.60480 3.40957 2.13416 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 33 2.60901 8.33580 3.08532 1.97861 3.09849 2.91320 3.12400 3.03375 2.01039 4.72310 3.80750 3.44480 2.69206 3.00902 2.13419 2.59258 4.21945 4.87936 4.21603 5.05327 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00022 8.79676 9.51910 0.61958 0.77255 0.48576 0.95510 34 2.41821 8.33397 1.88706 2.36678 3.61162 3.52937 3.50914 3.64270 2.21426 3.94792 4.06937 2.91466 2.96554 4.05499 3.18709 3.10076 2.24508 3.63860 2.89014 4.59007 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00015 8.79669 * 0.61958 0.77255 0.00000 * //