# STOCKHOLM 1.0
#=GF ID   DUF4012
#=GF AC   PF13196.1
#=GF DE   Protein of unknown function (DUF4012)
#=GF AU   Mistry J
#=GF SE   Jackhmmer:O26332
#=GF GA   28.00 28.00;
#=GF TC   33.00 31.40;
#=GF NC   26.20 26.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR025101;
#=GF CC   This is a family of uncharacterised proteins found in archaea
#=GF CC   and bacteria.
#=GF SQ   44
#=GS B9TTI5_BIFLN/276-421  AC B9TTI5.1
#=GS B6GC95_9ACTN/192-335  AC B6GC95.1
#=GS B6XVM5_9BIFI/40-183   AC B6XVM5.1
#=GS C4FB34_9ACTN/284-431  AC C4FB34.1
#=GS A4E9S1_9ACTN/347-489  AC A4E9S1.1
#=GS O26332_METTH/35-172   AC O26332.1
#=GS Q2NHL4_METST/35-172   AC Q2NHL4.1
#=GS D2ZN44_METSM/37-174   AC D2ZN44.1
#=GS D3E2U0_METRM/35-172   AC D3E2U0.1
#=GS A5UM60_METS3/35-165   AC A5UM60.1
#=GS D3E2V2_METRM/35-165   AC D3E2V2.1
#=GS D1C8M4_SPHTD/255-396  AC D1C8M4.1
#=GS D1CAL0_SPHTD/247-396  AC D1CAL0.1
#=GS A1R9F8_ARTAT/233-385  AC A1R9F8.1
#=GS D1BZ19_XYLCX/242-389  AC D1BZ19.1
#=GS A1SPI6_NOCSJ/189-332  AC A1SPI6.1
#=GS C8XCC8_NAKMY/240-382  AC C8XCC8.1
#=GS D9TEP4_MICAI/221-363  AC D9TEP4.1
#=GS C4RDP5_9ACTO/239-381  AC C4RDP5.1
#=GS D1BZC9_XYLCX/239-392  AC D1BZC9.1
#=GS C5BX44_BEUC1/233-375  AC C5BX44.1
#=GS A5CNV3_CLAM3/245-387  AC A5CNV3.1
#=GS B0RIH7_CLAMS/226-369  AC B0RIH7.1
#=GS A8L7S2_FRASN/204-351  AC A8L7S2.1
#=GS D3D3P2_9ACTO/203-350  AC D3D3P2.1
#=GS Q0RE23_FRAAA/222-369  AC Q0RE23.1
#=GS D2B201_STRRD/210-353  AC D2B201.1
#=GS C1AWG0_RHOOB/229-372  AC C1AWG0.1
#=GS Q1BDH2_MYCSS/209-352  AC Q1BDH2.1
#=GS A4TF39_MYCGI/205-348  AC A4TF39.1
#=GS C1A0P3_RHOE4/245-389  AC C1A0P3.1
#=GS Q0S5F5_RHOSR/244-387  AC Q0S5F5.1
#=GS E3J4W0_FRASU/335-479  AC E3J4W0.1
#=GS A6W6W5_KINRD/200-343  AC A6W6W5.1
#=GS C5ECU8_BIFLI/267-413  AC C5ECU8.1
#=GS D3R6N1_BIFAB/259-407  AC D3R6N1.1
#=GS D4BMN4_BIFBR/203-351  AC D4BMN4.1
#=GS D1NVT6_9BIFI/212-362  AC D1NVT6.1
#=GS B1S9Z8_9BIFI/241-381  AC B1S9Z8.1
#=GS A7A7K3_BIFAD/220-362  AC A7A7K3.1
#=GS B6XVH8_9BIFI/203-345  AC B6XVH8.1
#=GS C4FCX8_9BIFI/190-332  AC C4FCX8.1
#=GS B1SB78_9BIFI/207-356  AC B1SB78.1
#=GS B3DT15_BIFLD/220-365  AC B3DT15.1
B9TTI5_BIFLN/276-421             SGPRTYLVLAQNNAELRATGGIPTAWATLTIDAGKISMST.FGDPPRNGLFS..QDEAASV.LTAEERN..LFS....TKMATDYPDINFTPDFPRVADIARQIWHRAG...HD.GVDGVISVDPVFLQRLLKVA.GPVTL..S.DGT..........VMSGDNAEQRILNQIY
B6GC95_9ACTN/192-335             EGDRTYLITAQNSAEMRASGGFPGSMGTLRLQGGKIELDE.F..SKVYDVMA..EATSPELGVSEQEIS..LFG.....GFMNVARDAGMDPDFTRVADIWATAYEEKT...GV.HVDGVISVTPAVVQDLLAIA.GPITL..S.DGT..........VVDGTNATKVLQHDLY
B6XVM5_9BIFI/40-183              DAPRNYLILAQTNAEARPFGGLTGSLGLATVQGGHVSLQP.F..VSDSEIQN..ADEPVVD.LTAEERL..LFT....DKLGKDIRDVNFTPDFPRTGEIMSAMWNRQY...GV.AVDGVIAIDPLFLQNMLAVT.GGVAM..P.DGS..........TLDGANTARTLLHDVY
C4FB34_9ACTN/284-431             DGPRNYLITAENNSEIRACGGFIGSLGVMNVDNGKISLGD.F..EGTLRSSN..GPKPQIT.ITDEEMT..LFQPYEPT.MNFISGDAYFTPDFPKGASNVSTLWSLEH..GGQ.HIDGVVALDPVFLQYLLQLC.GGVTA..A.DGT..........VVDGSNAANELLSGSY
A4E9S1_9ACTN/347-489             GQTRNYLMYAMNNVEIRACGGFGGSQGLISVTDGQMSIGE.F..VPRIGLS...EDEAVES.VDEEDEA..LFG....NHSNLYNSGNTYSPDWPRNSQRVAALWKSQY...GQ.DVDGVIGIDPVFLQYLLGLV.GNVSL..P.DGT..........VVDGTNAAKVLMHDVY
O26332_METTH/35-172              VGEKHVLLLCADPGEPRPGIGAVDMAFIITMNEGNITNVTAV..YPHN......MAHPTAQSPASLRAQ.........GVSRWLLHDALWENDTERGARLAQEIVEYNT...GI.KTDIVVIVTPQAVDGILQSI.GPVYV....EGQ..........GYVSGNSIQFLREEQQ
Q2NHL4_METST/35-172              KGEHNILILCSDPSENRPGVGSVDMAFVVNVNNGKLGNVTPV..YPGG......LAHPTLTPTPDMQAE.........GLTRWYLHDSLWSSDLENGTKIAQEIVEYHT...GM.KTDMVLVVTPTAIDAMINAV.GPVYS....NGQ..........LVENVSSIDFLREDQS
D2ZN44_METSM/37-174              QGSKNILVCAIDESEPRPGMGACDMAFIVSLQDGELVNYTEI..YPHG......MTHPNASEPQEAQEQ........GAGEKLLLHDSFWDNDTKKSMQLAKEIVEYNT...SE.NIDAVVAVNSEALDAILKSA.GTLDV....NGT..........QMNASG.IDIIREEQY
D3E2U0_METRM/35-172              SGDKDILVCAIDESEPRPGMGAVDMAFLVHMNDGGITNYTPI..YPHG......MVHPSIAEPEEYQAM........GAGEKLLLHDCFYWEDKQQCMQYAKEILEYNT...NY.SCDAVIAVNSQAIDNIISAA.GTLKY....NGE..........EVNASG.IDFIREEQN
A5UM60_METS3/35-165              SGDKNILVLASDKDE.QPGGG.VDMAYMVKLENGTIANYTPV..YPGG......MTHPTKQALGGLEGP.............MRLHDCLWDGP.EQGMEYAKEIVEANT...GM.HADAVVIIYDDGLDAIIDSI.RPLKV....DGV..........ETDLGATDIVRQNDNY
D3E2V2_METRM/35-165              QENKTILVLAADKYE.QPNGG.CDMAYLVRLENGSLANYTPV..YPGG......MYHPSQSAPGNLQGN.............MLLHDCLWNG.VEDGMQYAKEIVAFHT...GV.EADAVVVLYDEGVDNVLDSI.RPIEI....DGE..........PTNLSATDIIRENDNY
D1C8M4_SPHTD/255-396             NGPVRYLVLFQNPAELRPSGGFPGTMGLVTLERGQLRDYQ.I..FSSHELTQDYMRQRQERRPQPWPIE..QYF....PQDGFLLHDATWWADFPRGAAVTMEMYAETDWP....PIDGIIALQPTVVSDLLRIT.GPITL..SVDGE................DREITADNVY
D1CAL0_SPHTD/247-396             EEPARYLFLFQNTNELRLSGGFPGTVALVTFDRGQLASYE.F..HDVYELQRA.YEAGRTEPVTPPLPVARHFG.....HEELPIQDATWVTDFAEGAAQMVEMYPATGWP....AIKGVVAVTPDVVSDILALT.GPVTV..EVDGEPR........RIDADNVHDEIERQRY
A1R9F8_ARTAT/233-385             DGSRRYLLLIQNSAESRATGGIPGALAVLKVDNGILTLES.Q..KSAGELG...AFSPPIP.TDSEQQA..IFS....ARVGKFMQDVNLTPDFATTASIAQAMWGRST...GE.ELDGVLSLDPVALSFILEAT.GPVQI..T.DPVVQQIGHKLPRQLTGENVVKTLLSDAY
D1BZ19_XYLCX/242-389             DGPREWLVLAQNNAQQRATGGIPGAVLLVHADDGELGFVD.K..ASTADIS...VFDAPVLPLTDTEEA..LFG....AGLGRWVQNINFTPHFPRTAELASEMWVQRM...GG.NPRGVLSIDPVALQSLVGAT.GPVTFEDP.FGVPI........TLTEQTTAEFLMSTIY
A1SPI6_NOCSJ/189-332             EGPKNYLLLFQNNAEIRATGGMPGSWALLHAEDGELSMAR.Q..GTAGDFP...TAVTSVLPLTSEEET..VYG....DELGLYFQDPGWTPDFPRAAELWHAHWDQRF...PRLPIDGVVALDPVGMSYLLDGT.GPVTV....DDV..........TLTRDNAVEELLNKPY
C8XCC8_NAKMY/240-382             DGPRTYLVVFQNLAEPRATGGIFGSYAVVTADQGKVTIVD.Q..APARSMK...FFEPPVGGLSDDQQR..LFG....SEPATFPADVNLTPDFPTAARLFIEMYQARG...GG.AVDGVLAIDPVALSYLMKGA.PALNV....DGV..........SIDAGNVVATLLSDAY
D9TEP4_MICAI/221-363             DGPRSYLLVSQNPAELRATGGMFGAYAVLRAEGGRIRLVK.Q..GSSSDLR...FFDPPLK.VDAEAKR..LWG....ELPGIYPADVNLNPDFPAAAALYRDMVRRRT...GT.TVDGVLAVDPVVLSYLLGVV.GPVNV..P.DGP..........SLGAATAVRTLLSDSY
C4RDP5_9ACTO/239-381             GGPRSYLMVSQNPAELRATGGMFGAYALIEANDGKLRMGA.Q..GTSAKLG...LFDPALK.LKPEIRN..LYT....DLPGMYPADVNLTPHFPTAAALFRQMYRERS...GR.TVDGVLAVDPVVLSYLLKAT.GPVSV..P.GHS..........TLVSEKVVRTLLSDTY
D1BZC9_XYLCX/239-392             DGPRTYLVLALTNAELRSGGGLPGAGLLVRADAGHVEVLR.Q..VPGVEIGP..FTTPVAE.LDAETAA..IFT....ERPALFIQDVTLTPEFPTAAALAARMWALSQ...GE.EVDGVVATDPVALAHLLEAT.GPVDVAAP.DGDGTVGSSTV..RLDAGNAVAILEHEVY
C5BX44_BEUC1/233-375             DGEQRYLVLFLTNSELRSAGGIPGALAVLTADDGRVALTD.Q..VSTADVG...PFDDPVPGLAPEDAE..IFG....DRPARYIQDTTMLPDFPSAASLAATMWEAS....GRGAVDGVISVDPVALSYVLTST.GPVDV..P.GGR...........IDADGAVDLLLSGAY
A5CNV3_CLAM3/245-387             DGARNYLLMFQNNAEVRSTGGNPAALVLLTVEDGTVRIAK.Q..ASSNDFP...RNVRQGD.VPDETVR..LIE....PRSDRFEQNITMFPDFPTSGALAKSYWEANI...GD.RVDGVLSFDPIALSYLLEAT.GPITL..A.TGD..........ELNAENAVPTLLGAVY
B0RIH7_CLAMS/226-369             DGDRSYLLMFQNNAEVRSTGGIPGALALVRTGGGGFSLAG.Q..DSARAFPR..LAEPALP.LDPQTAG..LYG....TITGRYMQDVTLTPEFPQAAPLAAEMWRLKH...GE.AVDGVISIDPVALSYLLEAT.GPITL..A.TGD..........VLRSDDAVDLLLHDVY
A8L7S2_FRASN/204-351             DGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLTFDD.I..SGSGRLPGGPTQIRPATDLSPELMA..RYG...PFQPARVWANANLTPDYPTAGRLYSELYHAGT...GT.AVDGTISLDPTTLSYLLAET.RPVVL..P.DGR..........VIPANELVELVESQVY
D3D3P2_9ACTO/203-350             SGQRRYLLIVQNPAESRANGGIIGGFGVLTATRGRLELDD.I..SGNGNLPGGPTQRLPAMDLPAEFAT..RYG...QFWPARVWANANLTPDYPTAGQLYSALYRAGT...GE.TVDGTISLDPTTLAYLLAVT.GPAVL..P.DGR..........TVRADQLVELVESRVY
Q0RE23_FRAAA/222-369             TERRRYLLIVQNPAESRATGGIIGGFGLLTADQGRLSLDG.I..SGNGSLPGGPTQQTPATMLPGPFAA..RYA...SFWPDRVWANANLTPDYPTVGKLYSHLYQSGT...GI.DVDGTISVDPTTLSYLLAAS.RPAVL..P.DGQ..........VVTAANLVDLVESRVY
D2B201_STRRD/210-353             DGPRRYFLAFQTNAEARGTGGLVGAFGILEADRGKIGIRR.L..SSNADLGM..SPAPVVD.HGPAFRA..RYG....PSAAKLLSISNLSPHFPYAAATWAGLWERQN...HR.RLDGALATDPVGLSYLLEVI.GPIAL..R.GGE..........TVTAENVVDLTERAAY
C1AWG0_RHOOB/229-372             DGPRSYFLAFQTNAEARGTGGLVGGYSVIRASDGKLGIEK.L..GKNTEVT...YDKRPLD.LGPDYKS..MYG...NYNPSVDIRNSNLSSHFPYAGRIWQSMWAQES...GE.RVDGAIATDPVALSYVLAAV.GPVTL..P.DGE..........VVDAGNVVELTESTAY
Q1BDH2_MYCSS/209-352             DGPRTYFMGFQTNAEARGTGGLLGGFGVLRFDNGTATVDT.L..ASNRDLA...GASASVD.LGREFID..MYG...FTNPTTDFRNSNLSSHFPYAAQIWKSMWAEQT...GM.NVDGVIALDPVALSYVLGAV.GPVKM..P.DGE..........VITKDNVVELTESTAY
A4TF39_MYCGI/205-348             DGPRTYFMGFQTNAEARGTGGLLGGYGILRFDNGVPSVDT.L..APNTTLD...DAVAPVD.FGFEYDQ..QYG...FNQPFFDYRNSNISPHFPYAAQIWQGMWQEQT...GQ.KVDGVIAIDPVALSYILGAV.GPITM..P.DGE..........VVAKDNVVELTESTAY
C1A0P3_RHOE4/245-389             DGPRNYFIGFQTNAEARGTGGLLGGYGIVRVDNGAARVDT.L..SPNSELT...LDNQPID.LGPDFNQ..LYG...NSRPTTDFRNSNLSSHFPYAAQIWQSLWSQES...GGEMVDGAIATDPIALSYLLEAV.GPVEM..P.DGE..........SVTADNVVELTESTAY
Q0S5F5_RHOSR/244-387             DGPRNYFMAFQTNAEARGTGGLLGGYGVIRANDGVARVDT.L..GRNSDLP...MNSQPID.LGPEFAA..QYG...HSRPTTDFRNSNLSSHFPYAAQIWKSLWAQES...GE.QVDGAIATDPVALSYVLDAI.GPVKM..P.DGE..........VINADNVVELTESTAY
E3J4W0_FRASU/335-479             NGPRTYFLAFQNNAEIKATGGLLGVYGILTADHGKINLVH.T..GSNDELKN..FKVPVVD.FGPEYNA..NYG...TLFPGALWSNGNSSPNFPYAGQTWATMYERQT...GT.HIDGVIGVDPEMLADLVRAT.GPITL..S.SGQ..........KVDGDSVAKLVEVDAY
A6W6W5_KINRD/200-343             EGARTYLVAFTNPAEIRPVQGIVGAYAYLAVEGGRISLTR.T..GTDNDLYD..ARADVAA.AGAEFAA..LYG.....EDAAIVQNVTTGGSADEAGVLTSSLVADA....GLPVPDVVVFVDPVGLGQLLGPDHAPLQL..GPFGD...........VATADLARVLMYDAY
C5ECU8_BIFLI/267-413             DGKRTYLVMVQNPAELRSAGGMVGTIAAITADKGTITIGD.F..ATTSGWD...IPEEPMDDTVLKERQ..VFG....GTFDQYPATTTIDPEFQRVAQMNKYMWLYQKGNEDK.NVAGVLSFDPVFLQALLGAT.GKVKL..S.DGR..........VLDSTTTVPFFASDLY
D3R6N1_BIFAB/259-407             KEPQTYAVMAMTPAEMRMSGGLIGAIGTLTLNKGKIEIGE.F..LPNDAY....VKEGGAD.VDFDTKR..IFMNDGPLYMTYDVRDLANFTDTEMTANAFLSLWKRMPWGEKT.TLNGIIMVDPVVVQALVKVT.GDVKL..P.DGT..........VLNGNNTAQFMMNTVY
D4BMN4_BIFBR/203-351             DQPRTYALMAMTTSEERSSGGLIGSVGVVTTDNGKINIGD.F..RSNGEY....VNYGAGD.PTDDERR..IFNQWGPLQMSFDLRDLAVYPDTSRSAEGMRAIWQRTPWGSGT.QLDGVLMVDPVFLQELVKIN.GNITL..S.DGR..........VLTGDNTAKFLLNKVY
D1NVT6_9BIFI/212-362             DGPQTYAVMAATTSEMRSSGGLIGSVGELTTDNGHIAIGD.F..HSNADYLN..GNGGSAT.GTADEQR..IFQKEGPLRMSFDIRDLAVFPDTERVAQGMQEVWDRTAWGMQK.PLDGVILVDPVFVQELVRIN.GPVTL..P.TGQ..........VLNGDNTAEYLLNTIY
B1S9Z8_9BIFI/241-381             DGQRTYLVLAATTSESRSSGGLGGSLGSMTTNNGSFQMGD.F..YPNTE.....FEGENSEVYTDSDKA..VFP......FSFDIRDQEADPDFNNVAKNVATIWQQSS...HSTNVDGVMAIDPVFIQELVKLN.GNVQI..P.NGP..........LLTGDNTAQFLLNDIY
A7A7K3_BIFAD/220-362             NGARTYLLAAQTTSETRSGGGLVGSLGTMTADHGKIAVGD.F..HPNGEFV.......NGNNGTAEEHA..VFN..RPLGFSFDVRDTFAVPDVSRNAEMLNASWQRSQ...YACNIDGLISVDPVFIQKMVEIN.GPVTL..S.NGT..........VLTGENTAEYMLNTIY
B6XVH8_9BIFI/203-345             NGARTYLLAIQTPSEQRSGGGLVGSLGTFHADQGTVTVGE.L..HPDGTLL.......NGNNGNAEEKA..VFN..GPLAFSFDLRDTFAVPDIARNAEMLNATWQRSP...YACNIDGLLAVDPVFIQEMVGIS.GDVRL..E.NGT..........VLNGSNTAQYLLNTIY
C4FCX8_9BIFI/190-332             NGARTYLIAVQTTSEQRSGGGLVGSVGTLQANQGNVSVGE.F..RADAEL....INGGNGN...AEEYA..VFN..GPLAFSLDVRDTFAVPNLKRNAEMLAATWQRSP...YASEVDGFIAIDPVFIQEMVKLN.GNVTL..Q.DGT..........VLTGNNTAQYLLNTIY
B1SB78_9BIFI/207-356             GGEGKYLIMVQSNAEAQAAGGVPGSIGSLDVEDGKISVGE.F..HSDSEFQLVGDIDGTEQINQMYAIS..QFG....VDYGGDIRIATVSPNFPIVAKYATGVWKQQSFGAND.TIKGVMSLDPYALQSLLGIL.GEVTL..S.NGV..........QLDGNNTAQYLSNTVY
B3DT15_BIFLD/220-365             NGARNYVLLAQTNSEIRGTGGLIGSAGSFSADNGKIAVGE.F..HADAEFP...SNAALDDVNQDGDGT..LYS...GLYFGQVIHNLSSTPDFPRVASMAQKFWQAAPF..GG.SSDGVMSLDPVALQAMIGAT.GDVTL..S.DGR..........VLNGSNTAEFLLNGAY
#=GC seq_cons                    cGsRsYLlhsQssAEhRusGGlsGuhullps-sGplslsc.h..tsssch....htpssss.hss-pts..has.....t.shhhpDsshsPDFspuAphhpphWppps...Gt.slDGVlulDPVsLshlLpss.GPVsl..s.DGp..........slsusNsschlhsssY
//