# STOCKHOLM 1.0 #=GF ID DUF4020 #=GF AC PF13212.1 #=GF DE Domain of unknown function (DUF4020) #=GF AU Aldam G, Mistry J #=GF SE Pfam-B_2014 (release 24.0) #=GF GA 21.60 21.60; #=GF TC 22.60 21.60; #=GF NC 21.20 20.40; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF WK Domain_of_unknown_function #=GF DR INTERPRO; IPR025093; #=GF CC This presumed domain is functionally uncharacterised. This #=GF CC domain family is found in bacteria, and is typically between 176 #=GF CC and 195 amino acids in length. #=GF SQ 10 #=GS C2QD87_BACCE/981-1156 AC C2QD87.1 #=GS C2UWU8_BACCE/971-1146 AC C2UWU8.1 #=GS B7ILH4_BACC2/971-1146 AC B7ILH4.1 #=GS A9VJE5_BACWK/971-1146 AC A9VJE5.1 #=GS B7JSW0_BACC0/971-1146 AC B7JSW0.1 #=GS D2MLI2_9BACT/173-367 AC D2MLI2.1 #=GS B1ZQ15_OPITP/912-1093 AC B1ZQ15.1 #=GS Q2RKR8_MOOTA/981-1176 AC Q2RKR8.1 #=GS C3AMH6_BACMY/977-1152 AC C3AMH6.1 #=GS A7GQ80_BACCN/977-1152 AC A7GQ80.1 C2QD87_BACCE/981-1156 VFIKCVLYWE..........................QKTDWLYPLLMQGNEENKITFMQHVCYYVKTLSAKEQQKFWTAWLSVFLRERP..KMGEI....TTREYVMLLRIILYMDEIVEKGLGIVSRTFLDVNGKCTGEEMKQLFSEILDKNEKIKAHKEMYANVFFILLQTCQEADLFESEIIQIKKQLIEYEVDKRVLNLIENEI C2UWU8_BACCE/971-1146 VFIKCVLYWE..........................QKTDWLYPLLIRENEENKIKFMQHLCYYVKTLSVKEQQKFWTAWLSIFLRERP..KMGEI....TTREYVMILRIILYMDEILEKGLRIMSRTFIDVNGECAGEEIKQLFIEMFEKKESMKAYKEMYANVFFTLLQTRQEADFLENEIIQIKKRLAQFGIEKHVLNLIENEM B7ILH4_BACC2/971-1146 VFIKCVLYWE..........................QKTEWLYPLLILENEENKIKFMQFLCYYVKTLSVKEQQKFWTAWLSVFLRERP..KMGEI....TAREYVMLLRIILYMDEILEKGLCIMSRAFSSVHGKCTGEEMKQLLIEMLHKKESMKAHKEMFANVFFILLQTCHEAVLFEKEIIQIKELLVQYEVEEYVLHLLENEI A9VJE5_BACWK/971-1146 VFIKCVLYWE..........................QKTDWLYPLLMQENEENKIKFMQYLCYYVKTLSGKEQQKFWTAWLSVFLRERP..KMGVI....TTREYMMLLRIVLCMDEVLEKGLNIISSKFQGVEGQSNQEEMKQLFIEILEKKERMKAYKELYANVFFTLLQTCQEADLLESEIIQIKELLTRYEVERHVLNLIENEI B7JSW0_BACC0/971-1146 VFIKCVLYWE..........................QKTDWLYPLLIRENEENKIKFMQFLCYYVKTLSAKEQQKFWAAWLSIFLRERP..KMGGI....TAREYVMLLRIILFMDEIVERGLLIICKSFSDVGGKGNQTELKQLFHEILEKTESIKMYKELYANVFFTLLQTLQEANLLKTEIIQIKELLIGYRVEKCVINAIDNEI D2MLI2_9BACT/173-367 HFLKVLELIDSDLSDKRELFIEYYTNMLIYFVEDPFDK..WIPKLFHLDSPEARQEFVFNLSRCLQNLNEAAQQELWQRWLKQYWEN....RVQGIPTALEPGEIVSMLKWLPHLTAVFPEAVDLV......VQMQKVQLENYWVIDR.LNKSDLSQRHPEALAKLLIYLWECNLPNYTWVSGQELIDKLLKQDIITSEQKQKLKEIK B1ZQ15_OPITP/912-1093 HYLGHVATIM....................VHVRPAETAAWLQALLPALSERERLRWARLAARDSEGMPDQAQRELWDAWLGAYWRDRRAGRLGGVTLSLTSAEAAIMAGWLCALPEVFAEALELV......MHSPAPNFEHEIFPWRELRKSSLPVRAPVGVVALIEFLLRNMEVGRVSHESVSEIADALPRLAILRAPLLRVAEVM Q2RKR8_MOOTA/981-1176 LYVQASRELPAEPDRIRERLYEHLASIAVQSSINPLQEG.WLGKCIVAADEKERIKWANSIWHELASLPKEATSQLWGKWMEKYWEN....RLFGIPIPLSPGEAGAMVNWALELEPVFPSVVEKI......ISGPTPNLERGTFYYR.LSQEKIAKKYPEDVARLLVYLLSGTDMPFYWCTEVKNIFEQIATAGLSEEKLSLLREQL C3AMH6_BACMY/977-1152 VFIKCVLYWE..........................QRADWLYPLFIQETENDKIKFMEHLCYYVKTLSVREQQKFWEAWLAGFLIERP..KMSSV....TGREYVMFLRFVLCMDEVAEKGLQTILTRFSPPSERYDQAEMKQLFLSILEKKNNMKYHVEAYGELFFSLLQNLHEANSFENEIIEIKQLLTEYQVEKHLLISIQNEM A7GQ80_BACCN/977-1152 VCIKCVLYWG..........................QRTDWVYMIFIEEKEHDKIKFLKHLCYYVKTLSAREKQKFWDSWLATFLKERP..KMSLI....TGREYVMLLRFVFYMDEVAEKGVYTILNCFPIPIEHCSEAEMKQLLLTILTRKEKVIAHVQAYAKLFFILLQIVQDASSIENEMIQMKEMLETCHVDDDILTAIQNEM #=GC seq_cons VFIKCVLYWE..........................QKTDWLYPLLlpEsEEsKIKFMpaLCYYVKTLSs+EQQKFWsAWLusFLRERP..KMGsI....TsREYVMlLRhlLaMDEVhEKGLpll.ppF.sVpGcssptEhKQLahchLcKcEphKtahEhYAslFFhLLQsspEAshhEsEIIQIK-hLspapV-+clLshIcNEh //