HMMER3/b [3.0 | March 2010] NAME N_methyl_2 ACC PF13544.1 DESC Type IV pilin N-term methylation site GFxxxE LENG 31 ALPH amino RF no CS no MAP yes DATE Sun Oct 7 04:11:45 2012 NSEQ 777 EFFN 777.000000 CKSUM 3235188811 GA 27.20 27.20; TC 27.20 27.20; NC 27.10 27.10; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.4902 0.72824 STATS LOCAL VITERBI -7.5455 0.72824 STATS LOCAL FORWARD -4.2503 0.72824 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.49895 4.92048 4.26741 3.09793 3.14398 2.63903 4.30024 2.36177 3.07611 1.86937 2.79147 3.65600 3.77431 3.65302 2.82148 2.72025 2.82008 2.37312 5.46844 4.58170 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.00000 * 1 3.78599 5.26406 9.31681 5.96432 4.79854 4.25822 4.13115 5.02079 4.27624 3.19897 0.26708 4.37913 4.83305 5.32180 3.90212 3.95437 4.54962 4.05113 5.22382 5.11472 1 - - 2.68628 4.33066 2.89771 2.83456 3.40843 2.47580 3.67772 3.26048 2.65018 2.60480 4.14625 2.89548 2.77126 3.18361 2.72418 2.39555 2.78974 3.00846 4.60325 3.62100 3.02321 0.77252 0.71436 1.68281 0.20561 0.48576 0.95510 2 2.43028 4.04774 3.34983 3.57003 3.62684 3.31889 3.47969 3.52081 2.35963 2.42373 3.66683 3.03321 2.93416 3.03741 2.03454 2.42950 2.66965 3.48899 4.59470 3.84143 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00983 9.56689 4.63432 0.61958 0.77255 2.63658 0.07430 3 2.44622 4.45274 3.98797 4.45305 3.08862 3.05824 3.09196 2.94766 2.47388 2.31323 3.55668 3.06919 2.41898 3.78778 2.22830 2.50823 2.82883 3.31714 4.77387 3.99630 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00010 9.62230 10.34465 0.61958 0.77255 2.02272 0.14190 4 2.33738 3.85862 3.64727 3.85290 4.35846 2.77114 3.02498 3.01304 2.29683 2.61182 3.59891 2.80065 2.90423 3.37907 2.17361 2.49335 2.86063 3.45181 4.77456 4.06171 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00009 9.72774 10.45008 0.61958 0.77255 2.46429 0.08891 5 2.51729 4.14139 4.02108 3.66236 3.19633 3.39505 3.41280 3.17710 2.15626 2.35848 3.64202 3.08735 2.87973 3.87544 1.87745 2.31369 3.19013 3.35251 9.71471 3.74769 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00008 9.78141 10.50376 0.61958 0.77255 2.09147 0.13182 6 2.41007 3.97884 3.56227 4.05296 3.33016 3.09548 3.44888 3.30111 2.67185 2.56374 3.52250 2.83536 2.40736 2.84243 2.23106 2.56301 2.68424 3.59745 4.31509 3.91925 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00341 9.84930 5.69813 0.61958 0.77255 1.66902 0.20879 7 2.51012 5.35135 4.24435 4.03300 3.09866 3.41916 3.46658 3.49042 2.27987 2.70681 3.59715 2.79766 2.59942 3.30809 1.97045 2.23052 2.95110 3.19981 4.32417 3.86772 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00007 9.93120 10.65355 0.61958 0.77255 1.49707 0.25333 8 2.63882 3.90632 3.37937 3.94483 3.49415 3.29157 3.20560 3.52995 1.93007 3.09729 3.95554 3.03157 2.88644 3.35076 1.90053 2.15877 3.10469 3.38021 5.92646 3.79099 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00283 10.00791 5.88472 0.61958 0.77255 1.18766 0.36375 9 2.67951 4.81371 3.87594 4.09974 3.52309 3.11902 3.79606 3.16081 2.00615 2.67730 4.71508 3.07776 2.82455 3.38011 1.70708 2.12418 3.30052 3.82584 4.79377 3.57948 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00006 10.08104 10.80339 0.61958 0.77255 1.17886 0.36763 10 2.87315 4.03447 3.39635 4.03291 3.59156 3.24225 3.54608 2.99771 2.18745 2.53103 3.61123 2.86552 2.84462 2.95418 1.76920 2.50358 3.44512 3.40565 4.56358 4.17383 17 - - 2.68565 4.42527 2.77822 2.73425 3.45762 2.40815 3.72797 3.29656 2.67492 2.69227 4.23261 2.90266 2.73321 3.17695 2.89541 2.38189 2.77374 2.98821 4.58779 3.61805 0.04435 3.13815 10.85413 0.00437 5.43612 0.67244 0.71429 11 2.80278 4.49503 3.55665 4.10165 4.04382 3.14367 3.23126 3.84805 1.90099 3.05105 4.46427 2.61262 3.30168 3.41710 1.46947 2.34136 3.17856 4.15925 4.78629 3.98651 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00006 10.18786 10.91021 0.61958 0.77255 0.30453 1.33739 12 2.38536 5.45654 3.39229 4.51061 3.97682 2.66736 3.67861 4.25860 1.74728 3.57877 5.35593 2.31826 3.48215 3.27300 1.60243 2.38682 3.66259 3.91744 5.10964 4.37477 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.22623 10.94858 0.61958 0.77255 0.16161 1.90226 13 2.97681 4.41161 3.33802 2.25610 5.26229 5.26270 3.59439 3.68331 2.58931 3.95747 4.84080 2.47014 3.73981 1.31039 2.30171 2.54685 3.32827 3.86893 5.89309 4.15904 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00213 10.23775 6.17001 0.61958 0.77255 0.24216 1.53680 14 1.89824 4.81643 3.75483 3.76420 5.28890 3.16440 3.65833 4.89725 1.95818 3.40769 5.01276 3.24618 4.60105 2.48706 1.49859 2.07417 3.22718 4.79152 6.16660 5.88715 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23716 10.95951 0.61958 0.77255 0.20230 1.69743 15 2.73762 9.88434 10.63716 10.70640 10.90889 0.09614 11.03813 10.44944 4.92205 10.14095 10.83840 9.68009 5.17518 10.52216 10.39528 4.31442 8.57652 9.38746 12.24105 11.29851 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 16 5.02686 8.82806 9.43483 5.94291 0.36519 5.92685 4.94341 3.37558 8.59965 2.41477 3.33436 5.79579 8.99002 4.36887 5.94963 4.28772 5.04940 3.10395 4.92448 3.30791 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 17 4.34611 9.87538 10.68421 10.74393 10.85891 3.79753 11.02889 4.82331 10.53391 4.62083 5.27077 4.60792 9.57757 10.52180 10.38946 1.60960 0.31298 9.35922 12.20259 11.25157 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 18 9.83440 10.85916 11.82924 11.23323 3.67800 11.49786 11.58869 3.09759 11.17380 0.13526 3.45634 11.73616 10.99613 10.58142 10.88897 11.06035 5.43803 4.27796 11.02190 5.10185 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 19 3.81734 8.83406 9.44198 8.82575 4.55439 8.63395 8.96873 0.99177 8.60726 1.62652 4.16879 8.80157 4.34347 8.73544 8.60990 4.84776 3.48611 1.13180 5.48641 5.28192 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 20 4.80841 11.89929 4.88899 0.04416 11.17887 4.46573 9.66989 10.85185 9.03158 10.24012 11.25060 8.34159 9.65193 5.11797 9.91626 4.68225 9.35949 10.30500 12.39488 10.64243 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 21 3.02581 4.45281 9.43552 8.81904 4.51801 8.62698 8.96136 2.27371 5.63762 0.73455 2.58644 8.79458 8.99051 8.72846 8.60281 4.70780 3.42672 1.52554 5.49651 5.76148 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 22 4.11803 8.89062 9.50744 8.89847 7.99995 5.38277 9.04779 1.99598 8.68202 0.69214 1.38352 5.49049 5.56005 8.81077 8.68535 4.59012 5.28203 2.69940 9.53749 8.36187 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 23 2.76241 4.88107 9.69148 9.09030 4.59904 5.26582 9.27321 1.20342 8.88585 2.18963 3.48406 9.07843 9.26210 9.02450 8.89957 5.45471 4.11580 0.79955 9.75357 8.57333 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 24 0.72773 4.93872 9.49869 8.89148 5.13018 2.74720 9.03820 4.38535 8.67397 5.45253 8.02123 8.85297 9.03979 8.80180 8.67612 2.15863 2.90855 1.41498 9.53022 4.75467 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 25 2.87418 5.57822 9.46507 8.85010 3.74426 4.08638 8.99620 1.59202 8.63271 1.24548 1.62231 8.82679 9.02134 8.76167 8.63620 3.28146 2.96889 2.11889 9.48428 8.30842 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 26 1.23078 4.94986 9.43523 8.81875 3.11787 2.98060 8.96105 3.06072 8.60000 2.13403 3.60857 8.79427 5.58733 8.72817 8.60251 2.64250 2.34199 1.44342 5.28647 8.27461 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 27 4.63566 10.00045 11.05145 10.62564 4.99382 5.29323 11.58454 0.66564 10.63710 1.29913 3.71599 10.83417 10.76441 10.85022 10.81234 10.15487 5.54723 1.81232 11.63518 10.47141 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 28 2.46332 5.25557 9.43620 8.81977 2.75163 1.78247 8.96218 2.04456 8.60106 1.52935 2.75592 8.79532 8.99121 5.44818 8.60360 2.56833 2.49745 2.26986 9.45131 8.27570 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 29 1.54229 5.53454 9.43526 8.81879 4.23186 1.58991 8.96109 3.58944 8.60004 1.75221 3.24446 5.74842 8.99020 8.72821 5.70932 1.64720 2.79427 2.77602 9.45028 8.27467 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 30 3.17805 8.83174 5.68963 8.82312 3.10507 4.13813 8.96593 0.94321 8.60456 1.50441 2.75865 8.79882 8.99457 8.73282 8.60720 4.47474 4.02007 1.68560 5.76881 8.27929 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00005 10.23923 10.96158 0.61958 0.77255 0.48576 0.95510 31 2.69490 4.56520 9.43553 8.81906 3.55803 2.64922 8.96139 1.87736 8.60032 1.02841 3.22652 8.79460 5.33556 8.72850 8.60285 4.26409 3.82771 1.48276 5.61720 8.27494 39 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00004 10.23922 * 0.61958 0.77255 0.00000 * //