# STOCKHOLM 1.0
#=GF ID   Thioredoxin_5
#=GF AC   PF13743.1
#=GF DE   Thioredoxin
#=GF AU   Coggill P
#=GF SE   Jackhmmer:Q5HAE0
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.00;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF SQ   36
#=GS E6TX60_BACCJ/37-234  AC E6TX60.1
#=GS A5FCB1_FLAJ1/65-256  AC A5FCB1.1
#=GS Q11SG6_CYTH3/57-247  AC Q11SG6.1
#=GS C6VSI3_DYAFD/40-230  AC C6VSI3.1
#=GS C7PS82_CHIPD/74-264  AC C7PS82.1
#=GS D3FV18_BACPE/35-232  AC D3FV18.1
#=GS Y2855_BACHD/37-234   AC Q9K8Z7.1
#=GS Y2525_BACSK/37-228   AC Q5WF00.1
#=GS Q2B8X8_9BACI/27-219  AC Q2B8X8.1
#=GS B4BIF2_9BACI/29-221  AC B4BIF2.1
#=GS E3ICM7_GEOS0/30-222  AC E3ICM7.1
#=GS B7GLL0_ANOFW/17-202  AC B7GLL0.1
#=GS B5UHT6_BACCE/25-219  AC B5UHT6.1
#=GS Y1217_OCEIH/33-225   AC Q8ERT3.1
#=GS B1HNX7_LYSSC/24-198  AC B1HNX7.1
#=GS D7V0V7_LISGR/20-196  AC D7V0V7.1
#=GS Y964_LISMO/20-197    AC Q8Y8E0.1
#=GS Y1783_STAS1/27-190   AC Q49WD1.1
#=GS B9EAR2_MACCJ/24-187  AC B9EAR2.1
#=GS C0XKH9_LACHI/6-174   AC C0XKH9.1
#=GS Q03EW4_PEDPA/5-178   AC Q03EW4.1
#=GS Q38VN5_LACSS/5-183   AC Q38VN5.1
#=GS A8UBJ2_9LACT/11-187  AC A8UBJ2.1
#=GS A8U919_9LACT/20-196  AC A8U919.1
#=GS C9B1E6_ENTCA/5-182   AC C9B1E6.1
#=GS C8ZZE8_ENTGA/5-182   AC C8ZZE8.1
#=GS C7WHM5_ENTFL/5-182   AC C7WHM5.1
#=GS C9C546_ENTFC/5-187   AC C9C546.1
#=GS E7FNK7_9LACO/5-181   AC E7FNK7.1
#=GS C2EHN0_9LACO/5-182   AC C2EHN0.1
#=GS C4FUH5_9FIRM/22-198  AC C4FUH5.1
#=GS D0BL54_9LACT/18-194  AC D0BL54.1
#=GS Q03QF1_LACBA/5-177   AC Q03QF1.1
#=GS A8FC01_BACP2/24-213  AC A8FC01.1
#=GS A7Z3E4_BACA2/24-217  AC A7Z3E4.1
#=GS Y1249_BACLD/24-215   AC Q65LA8.1
E6TX60_BACCJ/37-234             YMFIDPLCPECWALEPIVKKLQME.....YSPYFTLRTLLANELKSLNQPAGSKKAAH.IRELARSYDETATRTGMPCDGDVW..YEATPTTPYLAILAIKAAELQGKAIGSKFLRRLREALFLHKQNIACEEVLIECANKVKGLDVNEFKQDLHSKTSSKAFQNDVCTTKEMEVTAVPTLVFFN..DNVDEPGLNVPGLYDYPTYVR
A5FCB1_FLAJ1/65-256             IYYTDPICSSCWGIEPQLRKLKLE.....YGDYFEIDYRMGGLLPDWSYNSGG...ISKPSDVAHHWDEASLHYEMPIDGDVW..LEDPLDSSYPSCIAMKAAQMQDKQKAIHFMRILREKLYLEKKNIAKWENIAEAAKLA.DLDTEKLKKDFEID.AVKLFRNDLNMAKNLNVRGFPTFYFSD....GNNNQLTVYGSKPYASYEN
Q11SG6_CYTH3/57-247             Y.YTDPICSSCWGIEPQLRKLKLE.....YGTSIDIEYRMGGLLPDWSYNSGG...ISKPSDVAHHWDEVSVYYDMPIDGGVW..LEDPLPSSYPPSIAFKAVQIQSTERAILFLREIREMVFLQKKNIAKWEHLEQAAKNT.GVNIEQFKKDYEGR.AKDLFYADLKLARDLGVHGFPTMIFSD....STGKNETVYGYKPYAVFEN
C6VSI3_DYAFD/40-230             Y.FTDPICSTCWGIEPQLRKLKLE.....YGHLVDIEYRMGGLLPDWTYNSGG...ISKPSDVAPHWDEVSRYYQMPIVGDVW..ITDPLHSSYPPSIAFKAAQMQDETRAIAFLRRIREMVFIEKKNITRWEHLAEAAENA.GLNAETLKQDCETR.ANDAFQADLQLAAQWGVRGFPTLFFVD....GSGAHEKVYGFKPYQMFEN
C7PS82_CHIPD/74-264             Y.FTDPICSSCWGIEPQLRKLKME.....YGQYIDIEYRMGGLLPDWSYNSGG...ISKPSDVAHHWDEVSRYYQMPIDGDVW..LEDPLSSSYPPSIAFKAAQLQDEQKAQLFLRRIKEMVFLEKKNITKWEHLSQAASAT.GLDTTRLKTDIEAV.GVQRFQEDLAISRQYGVRGFPTIFVTD....NKGHQEKIYGSKSYAVFED
D3FV18_BACPE/35-232             YTFIDPLCAECWAFEPILKKLQVE.....YGAYFKIRFLVAGRLQAWNFCQETKKGLAKKSEIAKVWEKIAHETGMSCDGDVW..LEHEWSSPYKASIAIKAAELQGPHAGSRFLRKLREYLFLEKKNITEDEIIMNCAESA.HLDLEEFKKDLESPLAKKALQCDIKTTNEMGVEVVPTFVFFN..NNVDEEGLSITGLYPYHIYVQ
Y2855_BACHD/37-234              YTFIDPLCPECWAFEPILKKLQVE.....YGQYFRIRFIVAGKLEAWNLCRGKYKGAQSREDLAHVWRKITETFGMPCDGDVW..LEDPITSSYTPSLAIKAAELQGPQAGVRFLRKLREHLFLNKQNVTKEDILISCAQRA.GLDVKEFKQDLHSKGAAKALRCDMQTTKEMDVDLVPTFVFFN..DNVDEEGIKVTGHYPYHIYVQ
Y2525_BACSK/37-228              YTFIDPLCAQCWSMEPILKKLKVE.....YGHYFRIRVLLAGKLNVWNACEAGK....AKYTRPPVWVKGVSSSNMPYAGDIK..LSD..FHPYKASLAIKAAELQGPKAGHRFLRKLRETLFLQKQNITNEDVLKACANAA.GLDVDAFIADLHSPSAAKALQCDVQTTNEMDVDTVPTFVFFN..DNSEEAGIKISGQYPFSIYVQ
Q2B8X8_9BACI/27-219             YMFVDPLCPECWALEPIIKKLMIE.....YGSYFSFKHVLSGRLASLNMGRKQR.....LESLADYWEKTASRSGMSCDGNVW..FENPVSSPHLASIAIKAAELQGRKAGIRFLRKLQEVLFLEKQNISNFDVLKSCAQNV.GLDVVEFVADIHSDSAAKAFQCDLKITSEMDVQEIPTLVFFN..ENIEEEGIKVTGYYPYEVYVQ
B4BIF2_9BACI/29-221             YLFIDPLCPECWGLEPIIKKLKIE.....YGRFFTIRYVLIGKWATWNARKGAK.....LEAMAKAWEWTASRSGMPCDGSVW..LENPISSPFAPSLAIKAAEMQGKRAGIRFLRKLQEQLFLEKQNVADLNVLAECAAEA.GLDVDEFLRDIHSLGAAKALQCDVKITSEMDVDETPTLVLFN..ENIEDEGIKISGCYPYDIYVE
E3ICM7_GEOS0/30-222             YLFIDPLCPECWGLEPIIKKLVIE.....YGRFFTLKHVLSGKLATLHMQKRHK.....PEMIAKVWERTASRSGMSCDGSLW..LENPISSPFAASIAIKAAELQGKRAGIRFLRQLQELLFLEKQNVSDISVLIDCATRV.GLDVDEFVRDLQSPSASKAFQCDLKITSEMDVNEIPTLVFFN..ENIEDEGIKISGCYPYEIYVE
B7GLL0_ANOFW/17-202             YLFVDPLCPDCWALEPVLKKLWIE.....YGQYFALRHVLIGQLDRLNGVSYK............RIDRHASRVGIACEDRVL..LQTPLPIPYVASLAVKAAELQGRQASIRFLRQLQEIVFIQGKTITETNTLIQCAIDA.GLDVQEFINDLSSPSAVKALQCDLKISAEMDVREVPTLVFFN..ENIEDEGIKISGCYPYDVYVD
B5UHT6_BACCE/25-219             YLFIDPLCKDCWEIEPFIIKLWLE.....YGKYFSIRHIVTGKVDGTNASSHKW...NKPANIRFVWEKTTSLQGFSCDGKVH..MQEASSTPYLVSMAIKAAELQGRKAGSKFLRKLQEYIFLENVSNPDCELLLACARDS.NIDVEEFKKDLHSASAKKAFQCDLKFTNEMHITEIPSLVFFH..ANSDEEGIKIAGNYSYDVYVQ
Y1217_OCEIH/33-225              YVFIDPLCAECWSLEPYIKKLSVE.....YGRFFTIRQIVSGQLSNLNVDVFEK.....PKKLKDIWERTAKRTGMSCDGDIW..DENPIDYPYVPSLAIKAAELQGKKAGKMFVRKLQENLFINKENISEEKILLNCATEA.NLDLEEFERDLFSSSAKKALQCDLKLTREMEVDYIPTIVFFN..QSVEEEGVKISGLYPYEIYKL
B1HNX7_LYSSC/24-198             YIFVDPLCPEAFSMQAVLRKLQLE.....YNHYFTWRFVLSTELTSLNCLSKR...............VKGCISGIELD..........INHPVLPSIAIKAAELQGKRAGARYLSKLQEYVLLSHQDVNSYATLLKIAEDI.QLDMTEFTVDFGSKEAARAFQCDLYIKREMEVDEVPSIVFFN..ECIEDEGLKVSGSYAYEVYEH
D7V0V7_LISGR/20-196             YLFFDPVCNDCWNVDANIRRLQLE.....YGKYFKLRYILHNNLQTFLCKQKR.......................EGNNADMKNQQEQSQLSYVACLAVKAAELQGKKLGISFLRKLQQAYFLEGRDIADDACIVEQALAT.GLDLKEFQKDWSSNIAKRAYIGDQKVAREMEITENPTVVFFN..KNIEDAGVKLTGCHSYDIYVH
Y964_LISMO/20-197               YLFFDPACDDCWNIEANMLRLQME.....YGNYFKLRYVLHNNLQTFVCKQKR......................AGNSNLSLKEQQIGAHLSYISCLAVKAAELQGKKQGITFLRKIQAAYFLENKDIASDEVLYDIAVST.GLDLSEFKKDLASTVAKRAYIGDQKVAQEMEIHENPTVVFFN..KNIEDAGLKLSGLHRYEVYVH
Y1783_STAS1/27-190              YSFFDPFSKECFKLSAILSKLRIE.....YKQYISIRHILNPSLRVLTKCQAQ...................................STSDLDNIALAYKAAELQGRIRAERFIHLVQNEI.IPKRDIITESMVNSCISNA.GLDYEVFKEDLNSSCLKESLQVDLHIAREMEIEEAPSLVFFN..EDVHEEGLKVEGLYPYHIYTY
B9EAR2_MACCJ/24-187             YSFFDPFCKDSWQMKSLLRKLQIE.....YNQFVDIKQILLPSLKVLTKCQAQ...................................STTIDDNIALAFKAAELQGRKKAAHFLNYIQNAI.MPKQDIITKELILHSADKA.GIDVEVFLEDIKSSHVTTSLKCDQHISNEMDVNYTPTLVFFN..ENFEDEGLKVEGIQNYSIYTY
C0XKH9_LACHI/6-174              YLFIDPLNRHCYDAEKTIDNISRK.....LNTKVSVRFISMLNIKILNQMAAK..............................AGDQFDRKLPYNIVLDSKAASFQGKKLGRHFLMDLQRELLLNDRNYND.ELVYGLAENN.GLDCRMFEEDRRSSLAENMFKCDQRMVHEMSVDEPATAVLFN..SAVDNNGVLINDFDYNSMFKF
Q03EW4_PEDPA/5-178              YLFITPWGDECFNCEKETIRYFKY.....AEEKVDFKIITVLNMNVVLKFIKR......................NQLKDANY...NELFNRMYLTSLDYKAASYQGKAKGRAFLMAMQNAIIDNNVPYSF.ELGSTIARQA.GLDTAMFEEDRQSKMTQEDFKRDQKLAHEMGAEDIPAAVIFN..LKDEECGVLMDHYDYQTLASV
Q38VN5_LACSS/5-183              FLYINPIGQRCLQSEKALLKIIDE.....ADMNIHFKFIPVLNLQNVERYMQF......................QNLNRRDLDLRNHVFSTMYEAVLAYKAATFQGSKKSQAFLMQLQQVFQQPDTTLDT.KLVLEIAEKA.HLDTEMLLEDWHSDLTKQVFDSDQQLACEMNIKMTPSAVAFDYSKDDSEAGLLIENCDSYDLLKE
A8UBJ2_9LACT/11-187             FLFINPISHDSLKMEEEAFKFIDT.....YENNSQITIYPYHNTHTLYSYMIK......................NQLSFENATLWNNLHNDSYHLSLAFIAASIQGKKKGRRFLMDLQRKMMNQNELLSK.DLVIDAAKKA.NLDVEMFLVDFHSTFVQKLFLSDQNFSQAMGIRETPSCLLVI..TDEEKKATLIENFITAEDLYQ
A8U919_9LACT/20-196             YLFINPIDSTCLQAEKEVLNFIEN.....STGKIRVNFVPVHNLSTVTQYLAT......................NNLSKGDLKLRNTVCSVTYDICLYYTAATMQGKKKGRNFLIELQTALLEEKEPFSE.HLILEVAKKV.KLDIPMFLEDKELDFTKTSFEADQKLAREMSISSAPSCVLFS..DHHKEHGLLIEEGITVELLQA
C9B1E6_ENTCA/5-182              FLFINPIGPICYDIEKEILNKLNT.....SRKKIHLQILPFVNLFSVGVSMDY......................LSMNKTDLVLRNEQTNQIYAASLDYKAAQLQGKKIARDFLLKLQQRIGIERQEYSD.ALVKELFSET.NGDLEMFLEDRSSELVKKNFATDQRVAKDMGITITPSAVVYDF.SSEEEYGVLLEGSEELRSLPL
C8ZZE8_ENTGA/5-182              YLFVNPIGPICYQSELTLLDALSD.....QRKKIQLHILPIMNLHTVGISMDY......................LSMDRSDLGLRNQQTSQIYQASLDYKAAQLQGRKIARDFLLKLQCQVGVNKEPYSF.ELVKQIFAET.NGDLDMFLEDRKSDLIKQNFASDQSVAREMGITMSPSAVVYNF.GCERDYGVLLEGMEALRNIPH
C7WHM5_ENTFL/5-182              YLFVNPLGGVCLEIEKEIIQLSVN.....DKKKIQLRFIPLLNMKTINEFLSR......................QHIPINDIKRRNRIFEDLYSAALDYKAAQLQGRKKGRQLLIGLQKAVAEDGLAYSP.ELSEELLLAA.GGDIDMYRKDRQSDFVKESFQTDQKVAREMGIKQHPTAVVYNY.TCENDFGILVENFENMDEIKQ
C9C546_ENTFC/5-187              YLFVNPLGEYCFEMEQQLLQFIEEEYGTPSKEKMQFRFLPLVNLQTIGDVMQQ......................KGISQNNLEERNHLFSMTYSAALDCKAAQFQGKKKGRRFLIKLQEAVGCNDIPYSQ.ELAESIFEEI.GGDLNMFKEDRQSDFVKEVFFSDQKIAREMGITKHPSAVVYNY.ACDRDFGVLVEVKGTSSLWRI
E7FNK7_9LACO/5-181              YLFINPLGSTCYHAEQNILKLVEL.....SKSKIKFKFVPLLNINSISSIMSS......................YGIDACDLKRRNQISQVLFRSAIDYKAAMFQGTKRGRKFLMTIQQEIHENHRDYTD.ELVLESAEKS.RLDVEMFLADRQSDLAVKCFKQDQKLAADLKVQTHPTLVVYN..LAGYDCGFSIKDCDSLEALED
C2EHN0_9LACO/5-182              YLFINPLGSTCYHTEQNILKLGDS.....LNEKINFNFVPLMNFKTINDVMCR......................MNIPLNNVDIRNRLSENIYHSSIDFKAASFQGKKKGRNFLLNVQQLVVNDQKDYNF.ETIKLAAQKS.GLDWDIFEQDRHSKLAIEAFKQDQELATEMNVTEHPTIVVYDC.SANNNSAYSFSGCESLDEIKK
C4FUH5_9FIRM/22-198             YLFVNPLGQDCRRVERELSRAIKQ.....MPAKTDVHILCFTSQPLIARYMMQ......................LGYEPQDLRHRNEIFQKIYSATLAYRAAGLQGKRRGRQYLYEMQSRINSDLERLTD.EFLASLACDI.GLDLALFESDRRSQYVKELYYRDQKIALEMKVQDTPSLIIFE..QCSGDSGILLQGPMECQHILE
D0BL54_9LACT/18-194             YLFINPIGKQCYHCEQEVMKFIER.....TPYKVHVHFIPFHNFKSVTQYMKN......................NQLNNKNIDLRNEIYTKIYDACLSYKAALLQGKKLGRAFLMELQTQLHLLHKEYTP.ELLQEIIQTI.GLDEKMFYEDKSSKLVHQEYERDQQIAQEMMVESNPSLVIFD..NLNQQFGVILHENISADMIEH
Q03QF1_LACBA/5-177              YLFVNPLGAPCMRSEQNIMKLAAR.....LNNKVSFQFVPLLTQQVVARSLPA..........................QPTLAERNAQFKVHYNAILAYKAALFQGKRKGRDFLLKMQTAVVADHQQFST.DLALSLAQTC.HLDIDMFKEDCSSDLAKQAFKTDQKLAAEMKITQSPSAVIFN..CDVSQCGLLLNDVTYEALCEV
A8FC01_BACP2/24-213             YVFIDPLSPDCWLLEPSIKKLKMK.....YGRFFTLRTVTSSSINALNRKRKK.......HLLTEAWGKFATKTQTKKEQML...SEQIVTSPYLASLALKAAELQGRKCGMKFLRLIQESLFCHQQDVTSEHVLLENAKSA.GLDIEEFQRDIHSQSAVKALKCDMKIAAEMDVSELPTFAFFN..TVNGDEGLKISGAYSYDVYEE
A7Z3E4_BACA2/24-217             YMFVDPLCPECWSLEPAIKKLKIK.....YGRFFTLRIIVSASITTLNKQKRKK......HLLAEAWEKIANRSGMPCDGSLWLEQDQPLSSPYLAALALKAAELQGRKAGILFLRSMQESLFVSKQNITDEDVLLEIAEKT.KLDVEEFKRDLHSQSAVKALQCDMKIAAEMDVTVNPTLTFFN..SLHDDEGLKVPGNYSYDVYEE
Y1249_BACLD/24-215              YMFVDPLSPECWALEPAIKKLKIR.....YGRFFTLRIIAACSITALNVQKRKK......RRLAEAWEKIACRSGMSCDGTLL..HDKALSAPYLASLALKAAELQGRKAGLQFLRCMQESLFLNQQDITEEQVLLAIAEHT.QLDLEEFKRDLHSQSAVKALQCDLKIAAEMEVASVPTLTFFN..SLREGEGLKVTGNYSYEIYEE
#=GC seq_cons                   YlFlDPlsscCaphEstlpKLth-.....Ysphhpl+alhhspLpslsttttp......................hshssssh..hpp.hsssY.uuLAhKAApLQG++tGtpFLpcLQctlhlp+pslop.-llhphApps.GLDl-.FpcDhcSshApcuapsD.+lupEMsVppsPThVhFN..ps.c-pGlplpGhhsYcla.p
//